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Os07g0665700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase, trypsin-like serine and cysteine domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0108) R2 : 0.728
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.905 (0.0259) R2dC : 0.726 R2C : 0.726
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0384 (0.0226) R2dN8 : 0.00222 R2N8 : 0.00273
σ : 0.203
deviance : 18.8
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_____
C
peak time of C : 13.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
9.6 0.146 13 -0.511 0.964 0.301 -0.161 0.435 -0.0731 13.3 79.03 1069 -- --
9.77 0.146 13 -0.545 0.966 0.338 -0.238 -- -0.0744 13.3 76.69 1068 -- --
9.69 0.145 13 -0.508 0.964 0.295 -- 0.547 -0.0738 13.3 79.56 1065 -- --
10 0.147 13 -0.555 0.964 0.338 -- -- -0.072 13.3 76 1072 -- --
34.29 0.274 13 -0.523 -- 1.02 -- -0.279 -0.12 -- 163.2 1005 -- --
11.99 0.162 13 -0.487 0.896 -- -0.279 -- -0.0922 13.5 -- -- -- --
12.31 0.164 13 -0.496 0.896 -- -- -- -0.0937 13.5 -- -- -- --
34.43 0.274 13 -0.519 -- 1.01 -- -- -0.119 -- 163.2 1005 -- --
14.24 0.176 13 -- 0.939 0.421 -- -- -0.103 13.4 69 31420 -- --
61.54 0.367 13 -0.532 -- -- -- -- -0.113 -- -- -- -- --
18.8 0.203 13 -- 0.905 -- -- -- -0.0384 13.5 -- -- -- --
41.48 0.301 13 -- -- 1.02 -- -- -0.0619 -- 146.1 21904 -- --
69.01 0.388 13 -- -- -- -- -- -0.054 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 9.36 temperature 30.0 720 < th dose independent rect. 17 10
2 9.41 temperature 30.0 720 < th dose independent rect. 17 2
3 9.50 radiation 1.0 270 > th dose independent rect. 11 19
4 9.56 radiation 1.0 270 > th dose independent rect. 11 8
16 9.56 radiation 1.0 270 > th dose independent rect. 10 21
20 9.61 radiation 1.0 270 > th dose independent sin 18 NA
26 9.67 humidity 70.0 720 > th dose independent rect. 16 11
27 9.67 humidity 60.0 720 > th dose dependent rect. 17 2
28 9.68 humidity 70.0 720 > th dose independent rect. 16 17
29 9.68 humidity 80.0 720 < th dose dependent rect. 17 16
30 9.69 humidity 70.0 720 < th dose independent sin 12 NA
31 9.69 temperature 30.0 720 < th dose independent rect. 16 13
32 9.70 humidity 70.0 720 > th dose independent rect. 16 7
37 9.72 radiation 1.0 270 < th dose independent sin 18 NA
44 9.73 temperature 15.0 270 > th dose dependent rect. 6 5
47 9.74 radiation 10.0 270 < th dose dependent sin 17 NA
58 9.77 humidity 70.0 720 < th dose independent rect. 16 17
63 9.77 humidity 50.0 720 > th dose dependent rect. 16 7
88 9.80 humidity 70.0 720 > th dose independent rect. 17 2
91 9.80 humidity 80.0 720 < th dose dependent sin 12 NA
104 9.82 humidity 70.0 720 > th dose independent rect. 16 4
111 9.82 humidity 90.0 720 < th dose dependent rect. 16 5
112 9.83 temperature 20.0 270 > th dose independent rect. 6 5
114 9.83 temperature 30.0 720 < th dose independent rect. 17 16
122 9.84 humidity 90.0 720 < th dose dependent rect. 17 2
131 9.85 radiation 1.0 90 < th dose dependent sin 14 NA
166 9.87 humidity 70.0 720 > th dose independent sin 12 NA
168 9.87 humidity 70.0 720 > th dose independent sin 16 NA
169 9.87 radiation 1.0 90 > th dose independent sin 14 NA
170 9.87 radiation 1.0 90 < th dose independent sin 14 NA
182 9.87 radiation 20.0 270 < th dose dependent rect. 15 11
186 9.88 humidity 70.0 720 < th dose independent rect. 16 4
222 9.89 temperature 30.0 720 > th dose independent rect. 17 2
328 9.95 temperature 25.0 720 > th dose dependent rect. 17 2
359 9.96 temperature 15.0 10 > th dose dependent rect. 7 7
369 9.97 radiation 1.0 270 < th dose independent rect. 14 12
381 9.98 humidity 80.0 1440 < th dose independent rect. 7 1
401 9.98 humidity 50.0 720 > th dose dependent sin 17 NA
424 9.99 humidity 50.0 270 > th dose independent rect. 7 15
442 9.99 temperature 10.0 270 > th dose dependent rect. 12 18
450 10.00 precipitation 0.1 270 < th dose independent rect. 13 16
459 10.00 temperature 25.0 720 > th dose dependent rect. 15 8
464 10.00 precipitation 0.1 270 < th dose dependent rect. 13 16
467 10.01 temperature 30.0 720 > th dose independent sin 13 NA
508 10.03 humidity 90.0 270 < th dose independent rect. 11 8
520 10.03 temperature 25.0 720 > th dose dependent sin 14 NA
533 10.04 temperature 30.0 720 < th dose independent sin 13 NA
643 10.07 humidity 50.0 10 > th dose independent rect. 8 6
650 10.07 wind 1.0 90 > th dose independent rect. 19 18
696 10.09 humidity 80.0 1440 > th dose independent rect. 7 1
734 10.10 precipitation 0.1 270 < th dose independent rect. 11 7
739 10.10 wind 1.0 10 > th dose independent rect. 20 18
756 10.10 precipitation 0.1 270 < th dose dependent rect. 11 7
772 10.11 humidity 50.0 90 > th dose independent rect. 7 7
820 10.12 wind 7.0 270 < th dose independent rect. 11 7
822 10.12 humidity 50.0 270 > th dose independent rect. 5 8
826 10.12 temperature 15.0 270 > th dose independent rect. 18 17
966 10.16 wind 1.0 270 > th dose independent rect. 4 9
978 10.16 wind 7.0 270 < th dose independent rect. 12 18
989 10.16 humidity 90.0 720 < th dose dependent rect. 11 12
998 10.16 humidity 90.0 720 < th dose dependent rect. 11 21