Os03g0109900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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Os03g0109900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase, trypsin-like serine and cysteine domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.82 | 0.422 | 12.7 | -1.71 | 0.623 | -1.31 | 0.364 | -0.348 | 0.304 | 0.441 | 23.2 | 75 | -- | -- |
| 80.96 | 0.419 | 12.7 | -1.75 | 0.615 | -1.25 | 0.269 | -- | 0.301 | 0.412 | 23.23 | 69 | -- | -- |
| 81.23 | 0.42 | 12.7 | -1.75 | 0.617 | -1.27 | -- | -0.0776 | 0.303 | 0.255 | 23.2 | 68 | -- | -- |
| 81.23 | 0.42 | 12.7 | -1.76 | 0.616 | -1.26 | -- | -- | 0.299 | 0.274 | 23.2 | 68 | -- | -- |
| 95.17 | 0.454 | 12.7 | -1.73 | -- | -1.13 | -- | -0.164 | 0.276 | -- | 23.79 | 754 | -- | -- |
| 100.41 | 0.47 | 12.7 | -1.48 | 0.452 | -- | 0.249 | -- | 0.468 | 0.106 | -- | -- | -- | -- |
| 100.64 | 0.47 | 12.7 | -1.49 | 0.452 | -- | -- | -- | 0.467 | 23.9 | -- | -- | -- | -- |
| 94.68 | 0.453 | 12.7 | -1.78 | -- | -1.08 | -- | -- | 0.249 | -- | 24.9 | 769 | -- | -- |
| 155.02 | 0.583 | 12.7 | -- | 0.51 | -0.559 | -- | -- | 0.576 | 23.9 | 22.74 | 17 | -- | -- |
| 113.5 | 0.498 | 12.7 | -1.47 | -- | -- | -- | -- | 0.473 | -- | -- | -- | -- | -- |
| 159.04 | 0.59 | 12.6 | -- | 0.434 | -- | -- | -- | 0.633 | 23.7 | -- | -- | -- | -- |
| 168.66 | 0.605 | 12.6 | -- | -- | -0.354 | -- | -- | 0.575 | -- | 25 | 669 | -- | -- |
| 170.88 | 0.61 | 12.6 | -- | -- | -- | -- | -- | 0.637 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 2 | 77.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 3 | 77.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 4 | 77.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 5 | 77.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 6 | 77.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 7 | 77.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 19 | 78.30 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 21 | 78.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 26 | 78.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 27 | 78.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 30 | 78.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 31 | 78.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 33 | 78.69 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 36 | 78.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 37 | 78.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 45 | 79.00 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 60 | 79.36 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 62 | 79.41 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 79 | 79.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 80 | 79.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 81 | 79.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 85 | 79.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 86 | 79.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 102 | 80.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 103 | 80.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 108 | 80.27 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 109 | 80.28 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 114 | 80.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 119 | 80.42 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 121 | 80.45 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 124 | 80.46 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 138 | 80.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 152 | 80.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 155 | 80.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 161 | 80.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 163 | 80.71 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 170 | 80.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 191 | 80.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 192 | 80.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 198 | 80.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 199 | 80.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 200 | 80.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 209 | 81.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 218 | 81.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 7 |
| 223 | 81.13 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 233 | 81.18 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 246 | 81.28 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 254 | 81.34 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 260 | 81.37 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 263 | 81.39 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 264 | 81.39 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 267 | 81.41 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 268 | 81.45 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 276 | 81.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 11 |
| 281 | 81.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 287 | 81.51 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 299 | 81.56 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 303 | 81.58 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 319 | 81.65 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 322 | 81.67 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 329 | 81.68 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 344 | 81.73 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 366 | 81.79 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 374 | 81.81 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 396 | 81.85 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 415 | 81.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 419 | 81.92 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 426 | 81.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 450 | 81.99 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 470 | 82.02 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 471 | 82.02 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 484 | 82.05 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 487 | 82.06 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 496 | 82.07 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 503 | 82.09 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 537 | 82.15 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 555 | 82.18 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 589 | 82.24 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 590 | 82.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 614 | 82.26 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 623 | 82.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 625 | 82.28 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 626 | 82.29 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 655 | 82.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 656 | 82.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 692 | 82.39 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 721 | 82.43 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 743 | 82.46 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 751 | 82.48 | temperature | 25.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 791 | 82.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 851 | 82.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 856 | 82.63 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 882 | 82.67 | temperature | 25.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 942 | 82.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 948 | 82.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 996 | 82.84 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |