BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0812500 Os02g0812500|AK106918
(332 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0812500 Cyclin-like F-box domain containing protein 601 e-172
Os02g0813300 Cyclin-like F-box domain containing protein 207 1e-53
Os02g0812600 Cyclin-like F-box domain containing protein 182 3e-46
Os12g0129700 Cyclin-like F-box domain containing protein 174 9e-44
Os08g0150700 Cyclin-like F-box domain containing protein 156 3e-38
Os12g0131600 Cyclin-like F-box domain containing protein 143 1e-34
Os04g0280500 Conserved hypothetical protein 131 6e-31
Os02g0813133 Galactose-binding like domain containing protein 123 2e-28
Os02g0813166 Cyclin-like F-box domain containing protein 112 4e-25
AK110304 92 6e-19
Os12g0486900 Protein kinase domain containing protein 91 1e-18
Os09g0525300 Cyclin-like F-box domain containing protein 86 3e-17
Os02g0675800 Cyclin-like F-box domain containing protein 85 6e-17
Os04g0571300 Cyclin-like F-box domain containing protein 81 1e-15
Os03g0116700 Cyclin-like F-box domain containing protein 81 1e-15
Os01g0158400 Galactose-binding like domain containing protein 71 1e-12
>Os02g0812500 Cyclin-like F-box domain containing protein
Length = 332
Score = 601 bits (1550), Expect = e-172, Method: Compositional matrix adjust.
Identities = 299/332 (90%), Positives = 299/332 (90%)
Query: 1 MDCEGAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHA 60
MDCEGAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHA
Sbjct: 1 MDCEGAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHA 60
Query: 61 AILARADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSI 120
AILARADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSI
Sbjct: 61 AILARADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSI 120
Query: 121 AWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADY 180
AWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADY
Sbjct: 121 AWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADY 180
Query: 181 TTGLECNIGMPTPMXXXXXXXXXXXXXXXXXXXXXXXXXXEQHKICLQHMGEEETIMHRQ 240
TTGLECNIGMPTPM EQHKICLQHMGEEETIMHRQ
Sbjct: 181 TTGLECNIGMPTPMATVTVVSGAGGTTSRPPAAPATTTTTEQHKICLQHMGEEETIMHRQ 240
Query: 241 ELVIRLRKAFGRTVRFDPDMDIRCPRPRDXXXXXXXWREVELGEFAVPAAGGEDGVVEVS 300
ELVIRLRKAFGRTVRFDPDMDIRCPRPRD WREVELGEFAVPAAGGEDGVVEVS
Sbjct: 241 ELVIRLRKAFGRTVRFDPDMDIRCPRPRDGGGGGGGWREVELGEFAVPAAGGEDGVVEVS 300
Query: 301 FKEETGRWKTGLIVQGIELRPKCTSKLIKLDS 332
FKEETGRWKTGLIVQGIELRPKCTSKLIKLDS
Sbjct: 301 FKEETGRWKTGLIVQGIELRPKCTSKLIKLDS 332
>Os02g0813300 Cyclin-like F-box domain containing protein
Length = 297
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 176/328 (53%), Gaps = 40/328 (12%)
Query: 1 MDCEGAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHA 60
M+ EG EI RLPEE ++ AIS +P DACH++AVSPAFRAAADSDAVW SFLP +
Sbjct: 1 MEEEGEGLCEIARLPEELLSAAISRASPRDACHAAAVSPAFRAAADSDAVWASFLPRNLP 60
Query: 61 AILARADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSI 120
+ AD ++ A ASKK+LF RL P LL D MS LDR +GAKC MLSAR+L I
Sbjct: 61 DL---ADGELSPAP--ASKKELFLRLSDGPYLLSDRLMSMWLDRETGAKCYMLSARSLVI 115
Query: 121 AWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADY 180
WGD P WRW P L SRF E AEL+DVCWLEI G++ +LSP +TYAAY+V+ AD
Sbjct: 116 IWGDTPHYWRWIP-LTDSRFAEGAELIDVCWLEIRGRIHSKMLSPNSTYAAYMVFKIADE 174
Query: 181 TTGLECNIGMPTPMXXXXXXXXXXXXXXXXXXXXXXXXXXEQHKICLQHMGEEETIMHRQ 240
GL+ +C+Q E+ +
Sbjct: 175 FYGLDAPF---------------------QEASVSLGGRGSTKIVCVQSYDSEDEEVPEN 213
Query: 241 ELVIRL-----RKAFGRTVRFDPDMDIRCPRPRDXXXXXXXWREVELGEFAVPAAGGEDG 295
+ + R+A R R D + P+ R W E+E+GEF GEDG
Sbjct: 214 YWPMSIGPLLRRRARRRDRRLVLDEGVTVPQKR-----TDEWMELEMGEFI--NEEGEDG 266
Query: 296 VVEVSFKE-ETGRWKTGLIVQGIELRPK 322
V S E + G WK GLIVQGIE+R K
Sbjct: 267 EVCFSLMETKGGNWKRGLIVQGIEIRLK 294
>Os02g0812600 Cyclin-like F-box domain containing protein
Length = 485
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 155/312 (49%), Gaps = 51/312 (16%)
Query: 13 RLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDGIAA 72
RLPEE + A+S+T+P DAC ++AV FRAAADSDAVW FLP D L R DG
Sbjct: 14 RLPEELLVAALSLTSPRDACSAAAVCRDFRAAADSDAVWSRFLPRD----LPRLADG-EL 68
Query: 73 AGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWT 132
+ S K LF RL P+LL S L+R G KC MLSARAL I WGD P WRW
Sbjct: 69 SPPPPSTKGLFLRLSAAPLLLPHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWI 128
Query: 133 PGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGLECNIGMPT 192
P L SR E AELL VCWLEI GK+ +LS T YAAYLVY AD + GL+
Sbjct: 129 P-LTDSRL-EGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLD------F 180
Query: 193 PMXXXXXXXXXXXXXXXXXXXXXXXXXXEQHKICLQHMGEEETIMHRQELVIRLRKAFGR 252
P +G T + RL++
Sbjct: 181 PFQEASVS-----------------------------IGGSTTTRQVGSVERRLKRRCSH 211
Query: 253 TVRFDPDMDIRCPRPRDXXXXXXXWREVELGEFAVPAAGGEDGVVEVSFKEETGRWKTGL 312
+ DI P+ R W E++LGE G+DG V +SF+E G WK GL
Sbjct: 212 ALVLAE--DIEHPQKRS-----DGWMELKLGELY--NEEGDDGEVCISFRETEGHWKRGL 262
Query: 313 IVQGIELRPKCT 324
+VQGIE+RPK T
Sbjct: 263 VVQGIEIRPKKT 274
>Os12g0129700 Cyclin-like F-box domain containing protein
Length = 373
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 116/183 (63%), Gaps = 5/183 (2%)
Query: 5 GAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILA 64
A I L E+C+A AIS+TTP DAC AVS AF+ AA+SD+VW FLP D+ +ILA
Sbjct: 89 NKKAEYISGLSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILA 148
Query: 65 RADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGD 124
RADD + S+K L L VLLD + S L+R S AKC +LS+R+L IAW D
Sbjct: 149 RADDRV----HFTSEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWED 204
Query: 125 DPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGL 184
P +WRW LP SRF EV ELL VCWL++ G++ LSP T YAAYLV+ D + GL
Sbjct: 205 HPLKWRWI-SLPDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGL 263
Query: 185 ECN 187
+C
Sbjct: 264 DCQ 266
>Os08g0150700 Cyclin-like F-box domain containing protein
Length = 299
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 160/313 (51%), Gaps = 43/313 (13%)
Query: 14 LPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDH--AAILARADDGIA 71
LPE C+A I++T+P DAC +AVSP+FRAAA+SDAVWD FLPPD+ A L A
Sbjct: 23 LPEACLADVIALTSPRDACRLAAVSPSFRAAAESDAVWDRFLPPDYRAIAPLPPPPATAA 82
Query: 72 AAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRW 131
A+G KK ++ LC +PV +DD +M L++ SGAKC L AR LS+ W D WRW
Sbjct: 83 ASGGKRMKKGVYLGLCDKPVPVDDGSMMVWLEKESGAKCFALPARKLSLPWEDGEFSWRW 142
Query: 132 TPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGLECNIGMP 191
TP P SRF EVA+L+D L+I G+L + L+PAT YAAYLV+ A G + G+
Sbjct: 143 TPH-PLSRFEEVAQLVDCTCLDIYGRLPAAALTPATPYAAYLVFGTAAAAEG---HRGLS 198
Query: 192 TPMXXXXXXXXXXXXXXXXXXXXXXXXXXEQHKICLQHMGEEETIMHRQELVIRLRKAFG 251
P +H +CL+ E R+ + L A
Sbjct: 199 FP--------------DQETTVSAAGRVVARHAVCLRPDDAEA----RKFRGVGLAGA-- 238
Query: 252 RTVRFDPDMDIRCPRPRDXXXXXXXWREVELGEFA---VPAAGGEDGVVEVSFKEETGRW 308
+ +R P R W E+ELG A V AGGED V SF+
Sbjct: 239 -------GVPVRRPARRG-----DGWSEMELGRVAADEVAGAGGED--VVASFEVLGWYP 284
Query: 309 KTGLIVQGIELRP 321
K GL+V+ +E RP
Sbjct: 285 KRGLVVECMEFRP 297
>Os12g0131600 Cyclin-like F-box domain containing protein
Length = 185
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 93/134 (69%), Gaps = 4/134 (2%)
Query: 7 AAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARA 66
+++ I RLPE C+A+AIS TTP DAC SAVS F+AAA S+AVW+ FLPPD+ +ILARA
Sbjct: 26 SSSSISRLPEACLAHAISFTTPTDACRCSAVSADFQAAASSNAVWERFLPPDYHSILARA 85
Query: 67 DDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDP 126
DD + S K+LF L VLLD + SF L+R SGAKC +LS+R+L IAWGDD
Sbjct: 86 DDPVDFT---TSNKELFLSLAQDHVLLDQRSKSFWLERTSGAKCYLLSSRSLEIAWGDDA 142
Query: 127 SRWRWTPGLPGSRF 140
WRW LP SRF
Sbjct: 143 RYWRWI-YLPDSRF 155
>Os04g0280500 Conserved hypothetical protein
Length = 323
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 97/179 (54%), Gaps = 17/179 (9%)
Query: 14 LPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDGIAAA 73
LP +C+A S+T+PGDAC +A + A R ADSD VW SFLPP+ A A DG
Sbjct: 18 LPMDCIACIASLTSPGDACRLAAAAAALRPVADSDDVWGSFLPPEWAGD-GDALDGKPGG 76
Query: 74 GECASKKDLFARLCGRPVLLDDATM---------------SFGLDRRSGAKCVMLSARAL 118
E SKK++F RLC PVLLD + SF L++RSGAK M+ ARAL
Sbjct: 77 REGESKKEMFLRLCDLPVLLDGGKLYWAFSSLISLLSLHQSFSLEKRSGAKKYMMRARAL 136
Query: 119 SIAWGDDP-SRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYS 176
W P W P SRF EVA L +CWL+I G LS T+Y AYLVY+
Sbjct: 137 GFGWSGYPYGGLVWIQNHPDSRFSEVAILSHLCWLDIYGIFNTKHLSNGTSYGAYLVYN 195
>Os02g0813133 Galactose-binding like domain containing protein
Length = 472
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 98/173 (56%), Gaps = 12/173 (6%)
Query: 13 RLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDGIAA 72
RLPEE + +S+T P A RAAADSDAVW FLP + R + +
Sbjct: 13 RLPEELLVEVLSLTGP---------RDASRAAADSDAVWSRFLPRGLPRLARR--ELPRS 61
Query: 73 AGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWT 132
S+K F RL P+LL MS LDR GAKC MLSARAL I+WGD P W W
Sbjct: 62 PPPPPSRKAHFLRLSAGPLLLPRKLMSMWLDREKGAKCYMLSARALQISWGDSPQYWSWI 121
Query: 133 PGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGLE 185
P L SRF E AELL VCWLEI GKL LS T YAAYLVY AD + GL+
Sbjct: 122 P-LADSRFKEGAELLSVCWLEIRGKLPGKKLSQNTNYAAYLVYKIADRSYGLD 173
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 97/240 (40%), Gaps = 44/240 (18%)
Query: 87 CGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWTPGLPGSRFPEVAEL 146
C + L D S LDR +G KC MLSARAL I + WRW SRF EV E
Sbjct: 275 CMEEIFLSDGLTSMWLDRETGFKCYMLSARALQIV--NLTHSWRWISLTGSSRFSEVVEF 332
Query: 147 LDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGLECNIGMPTPMXXXXXXXXXXXX 206
L +E+ GK+ +LS + YAAY+V+ A+ + GL ++ + T
Sbjct: 333 LKGYRVEVCGKIPCKMLSGNSNYAAYIVFVVAEDSCGL-ASVWVAT-------------- 377
Query: 207 XXXXXXXXXXXXXXEQHKICLQHMGEEETIMHRQELVIRLRKAFGRTVRFDPDMDIRCPR 266
++CL + + + D + P+
Sbjct: 378 -------VGVGGRQSTRQVCLDSSNRNDYYYEGE-------------IEVPQDGSVILPQ 417
Query: 267 PRDXXXXXXXWREVELGEFAVPAAGGEDGVVEVSFKEETGRW--KTGLIVQGIELRPKCT 324
R W E+ELGEF + V K + GRW GL++QGIE+RPK +
Sbjct: 418 ER-----ADGWMELELGEFYNQEGNNQGEVCFSLVKPKAGRWLSNGGLVIQGIEIRPKIS 472
>Os02g0813166 Cyclin-like F-box domain containing protein
Length = 262
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 5 GAAAAEIYRLPEECVAYAISMTTPG--DACHSSAVSPAFRAAADSDAVWDSFLPPDHAAI 62
G + EI RLP E ++ IS P DAC +SAVSPAFRAAADSD VW FLP D +
Sbjct: 2 GPSCCEIARLPVELLSAVISRAAPRPRDACRASAVSPAFRAAADSDDVWSRFLPRDVPDL 61
Query: 63 LARADDGIAAAGECA----SKKDLFARLC---GRPVLLDDATMSFGLDRRSGAKCVMLSA 115
A GE + S K LF RL G LL D DR +GAKC +LSA
Sbjct: 62 ---------ADGELSPPPPSNKALFLRLSGSDGNVPLLPDRLRGIWFDRETGAKCYVLSA 112
Query: 116 RALSIAWGDDPSRWRWTPGLPGSRFPEVAELLDV-CWLEITGKLQLSLLSPATTYAAYLV 174
R L I + RW P L SRF E E +D +EI K+ +L+P +TYAA++V
Sbjct: 113 RTLVIKCSETSDYRRWIP-LADSRFAEAVEFMDAPPRMEIRSKIDSMVLTPNSTYAAFMV 171
Query: 175 YSFAD 179
+ AD
Sbjct: 172 FKIAD 176
>AK110304
Length = 173
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 102 LDRRSGAKCVMLSARALSIAWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLS 161
LDR +GAKC +LSARAL I W P WRW P L SRF E AELL VCWLEI G +
Sbjct: 1 LDRETGAKCYVLSARALVIIWTCTPRYWRWIP-LTDSRFTEAAELLSVCWLEILGNIDSR 59
Query: 162 LLSPATTYAAYLVYSFAD 179
+LSP +TYAA LV+ A+
Sbjct: 60 MLSPNSTYAAVLVFKIAE 77
>Os12g0486900 Protein kinase domain containing protein
Length = 449
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 96 ATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEIT 155
A SF LD S AKC MLS+R L + WG+ P W+W LP SRF E AELL+V WL +
Sbjct: 266 ADKSFWLDATSNAKCYMLSSRLLKVTWGESPEHWKWIT-LPDSRFAECAELLNVYWLAVI 324
Query: 156 GKLQLSLLSPATTYAAYLVYSFADYTTGL 184
G++ L+P T YA YLVY + GL
Sbjct: 325 GEIATEDLTPGTRYAVYLVYKLTGTSVGL 353
>Os09g0525300 Cyclin-like F-box domain containing protein
Length = 281
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 14 LPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDGIAAA 73
LPE CVA + P + C + +S F VW++ LP ++A +LA A DG AAA
Sbjct: 22 LPESCVAEVLRRLDPPEICRMARLSRTFHG------VWEAKLPRNYARLLAVAADGEAAA 75
Query: 74 GECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWTP 133
E KK+++ARLC R LD T F LD+ G C+ +S+RALSI DD W + P
Sbjct: 76 LEAIPKKEVYARLCRRN-RLDGGTKEFWLDKGGGGVCMTISSRALSITGIDDRRYWNFIP 134
Query: 134 GLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYL 173
SRF VA L + W E+ G+++ P TY+ +
Sbjct: 135 N-DESRFHAVAYLSQIWWFEVRGEVEFCF--PEGTYSLFF 171
>Os02g0675800 Cyclin-like F-box domain containing protein
Length = 297
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 14 LPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDGIAAA 73
+PE CVA + P + C + ++ AFR AA +D VW LP ++ +LA A
Sbjct: 22 MPESCVAAVLLYLDPPEICQVARLNRAFRGAASADCVWAGKLPVNYRYLLAFAAAADDEG 81
Query: 74 GEC----------ASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWG 123
G+ +SKKD+FARLC RP D F +D+ G C+ +S++A+ I
Sbjct: 82 GDGGHGNGKRSSPSSKKDIFARLC-RPTPFDFGNKEFWIDKNKGGICLSISSKAMVITGI 140
Query: 124 DDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYL 173
DD W SRF +A L + WLE+ G+L PA +Y+ +
Sbjct: 141 DDRRYWS-QLATEESRFHHIAYLQQIWWLEVDGELDFCF--PAGSYSIFF 187
>Os04g0571300 Cyclin-like F-box domain containing protein
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 14 LPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDH-------------- 59
+PE CVA + P + C + ++ AFR AA +D VW + LP ++
Sbjct: 26 MPESCVAAVLLYLDPPEICKVARLNRAFRGAASADCVWAAKLPANYRYLAALAAAADDDS 85
Query: 60 AAILARADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALS 119
A +G + KK+++ARLC RP D T F +++ G C+ +S++A++
Sbjct: 86 GGDGATEGNGSRCSSAAMIKKEIYARLC-RPTPFDGGTKEFWMEKNKGGLCISISSKAMA 144
Query: 120 IAWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYL 173
I DD W SRF VA L + WLE+ G++ PA +Y+ +
Sbjct: 145 ITGIDDRRYWS-HLSTEESRFHHVAYLQQIWWLEVAGEIDFCF--PAGSYSLFF 195
>Os03g0116700 Cyclin-like F-box domain containing protein
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 6 AAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILAR 65
A A + LPE C A + + C + ++ AFR AA +D VW++ LP ++ +L
Sbjct: 19 AGGAGLGELPELCAAEVLLHLDAPEICRLARLNRAFRGAAAADFVWEAKLPENYGYLLDF 78
Query: 66 ADDGI-----AAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSI 120
D + KK+++ARL + V D L++ G C+ LS+++L I
Sbjct: 79 VDGAMEGGGGGRERSVMGKKEVYARL-AKAVPFDGGKKELWLEKSKGGVCIALSSKSLVI 137
Query: 121 AWGDDPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYL 173
DD W P SRF VA L + W E+ G+L+ PA TY+ Y
Sbjct: 138 TGIDDRRYWSHMPTTE-SRFHSVAYLQQIWWFEVVGELEFCF--PAGTYSLYF 187
>Os01g0158400 Galactose-binding like domain containing protein
Length = 244
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 91 VLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWTPGLPGSRFP------EVA 144
+ L T + +D R+ C ML R LSI W +DP W W P GS EV
Sbjct: 70 IFLAGKTKKYWVDERTRNNCFMLFPRGLSITWSEDPRFWTWKPLKEGSSDADTDTQIEVP 129
Query: 145 ELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFAD--YTTGLECNIGMPTP 193
L +VCWLEI GKL+ S L+P TY D Y + N+ + P
Sbjct: 130 SLQNVCWLEIHGKLERSYLTPGVTYEVLFEVMLIDPAYGWSVPVNLQLKFP 180
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,733,258
Number of extensions: 497633
Number of successful extensions: 1187
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1156
Number of HSP's successfully gapped: 18
Length of query: 332
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 231
Effective length of database: 11,762,187
Effective search space: 2717065197
Effective search space used: 2717065197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)