Os02g0675800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0675800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.99 | 0.508 | 10.6 | 0.578 | 2.71 | 1.27 | 0.185 | 2.05 | -0.123 | 7.44 | 22.8 | 135 | -- | -- |
| 122.14 | 0.515 | 10.6 | 0.744 | 2.71 | 0.918 | 0.21 | -- | -0.0984 | 7.39 | 22.8 | 107 | -- | -- |
| 117.06 | 0.504 | 10.6 | 0.585 | 2.71 | 1.29 | -- | 2.08 | -0.124 | 7.44 | 22.7 | 135 | -- | -- |
| 122.21 | 0.515 | 10.6 | 0.763 | 2.72 | 0.897 | -- | -- | -0.0955 | 7.39 | 22.8 | 103 | -- | -- |
| 390.38 | 0.92 | 10.6 | 0.893 | -- | 2.87 | -- | 2.25 | 0.155 | -- | 48.4 | 495 | -- | -- |
| 131.32 | 0.537 | 10.6 | 0.572 | 2.72 | -- | 0.207 | -- | -0.209 | 7.23 | -- | -- | -- | -- |
| 131.43 | 0.537 | 10.6 | 0.577 | 2.72 | -- | -- | -- | -0.209 | 7.23 | -- | -- | -- | -- |
| 394.01 | 0.924 | 10.6 | 1.27 | -- | 2.92 | -- | -- | 0.257 | -- | 44.43 | 495 | -- | -- |
| 136.25 | 0.547 | 10.6 | -- | 2.74 | 0.553 | -- | -- | -0.216 | 7.33 | 22.8 | 103 | -- | -- |
| 524.59 | 1.07 | 10.7 | 0.625 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 140.2 | 0.554 | 10.6 | -- | 2.73 | -- | -- | -- | -0.273 | 7.22 | -- | -- | -- | -- |
| 433.3 | 0.969 | 10.6 | -- | -- | 2.48 | -- | -- | 0.0631 | -- | 39.6 | 486 | -- | -- |
| 534.91 | 1.08 | 10.7 | -- | -- | -- | -- | -- | -0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.63 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 3 |
| 3 | 112.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 5 | 113.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 18 |
| 7 | 113.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 12 |
| 11 | 113.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 14 | 113.55 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 21 |
| 17 | 113.68 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 25 | 114.23 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 33 | 114.60 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 8 |
| 41 | 114.92 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 44 | 115.04 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 47 | 115.15 | temperature | 30.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 57 | 115.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 17 |
| 72 | 115.51 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 12 |
| 81 | 115.60 | temperature | 20.0 | 90 | > th | dose independent | sin | 11 | NA |
| 89 | 115.67 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 90 | 115.67 | temperature | 15.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 97 | 115.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 99 | 115.73 | temperature | 20.0 | 90 | < th | dose independent | sin | 11 | NA |
| 102 | 115.76 | temperature | 20.0 | 10 | > th | dose independent | sin | 10 | NA |
| 108 | 115.82 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 16 |
| 151 | 116.15 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 18 | 17 |
| 158 | 116.17 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 170 | 116.25 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 191 | 116.34 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 210 | 116.42 | temperature | 20.0 | 10 | < th | dose independent | sin | 10 | NA |
| 228 | 116.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 230 | 116.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 248 | 116.54 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 268 | 116.62 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 273 | 116.63 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 14 |
| 295 | 116.70 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 21 |
| 315 | 116.77 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 21 |
| 325 | 116.82 | radiation | 10.0 | 10 | > th | dose independent | sin | 19 | NA |
| 390 | 117.03 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 410 | 117.12 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 18 |
| 416 | 117.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 428 | 117.17 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 433 | 117.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 451 | 117.20 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 458 | 117.22 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 462 | 117.23 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 472 | 117.25 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 484 | 117.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 492 | 117.31 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 498 | 117.33 | temperature | 20.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 518 | 117.39 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 11 |
| 519 | 117.39 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 17 |
| 544 | 117.43 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 10 |
| 584 | 117.51 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 585 | 117.52 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 602 | 117.54 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 613 | 117.55 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 16 |
| 617 | 117.56 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 618 | 117.56 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 620 | 117.56 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 624 | 117.57 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 625 | 117.57 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 633 | 117.58 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 640 | 117.60 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 660 | 117.63 | radiation | 10.0 | 10 | > th | dose independent | rect. | 10 | 8 |
| 681 | 117.64 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 709 | 117.69 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 727 | 117.73 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 12 | 21 |
| 756 | 117.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 791 | 117.83 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 804 | 117.85 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 22 |
| 870 | 117.93 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 875 | 117.94 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 884 | 117.95 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 897 | 117.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 942 | 118.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 958 | 118.04 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 23 |