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Os08g0150700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0502) R2 : 0.764
β1 : -1.27 (0.365) R2dD : 0.0799 R2D : -0.493
β2 : 0.785 (0.0741) R2dC : 0.0564 R2C : 0.000894
β3 : -3.64 (0.265) R2dE : 0.892 R2E : -0.6
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 26 (2.06) R2dD*E : 1.5 R2D*E : -0.157
γ1 : 1.04 (0.0643) R2dN8 : 0.204 R2N8 : -0.11
σ : 0.531
deviance : 129.86
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_____
C
peak time of C : 17.3
E
wheather : temperature
threshold : 29.92
memory length : 4031
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
126.52 0.528 12.7 -1.24 0.735 -3.58 1.49 25.8 1.04 18.2 29.9 4106 -- --
167.76 0.603 12.4 0.489 0.719 -2.51 1.53 -- 0.202 18.5 19.2 27744 -- --
129.86 0.531 12.7 -1.27 0.785 -3.64 -- 26 1.04 17.3 29.92 4031 -- --
160.98 0.591 12.3 1.45 0.811 -1.68 -- -- 0.602 17.3 18.5 28983 -- --
160.88 0.591 12.7 -1.27 -- -3.64 -- 26.7 1.04 -- 29.92 4031 -- --
181.6 0.632 12.2 3.28 0.784 -- 1.59 -- 1.18 18.4 -- -- -- --
186.36 0.639 12.2 3.27 0.809 -- -- -- 1.19 17.7 -- -- -- --
193.73 0.648 12.3 1.55 -- -1.63 -- -- 0.573 -- 18.9 27690 -- --
176.54 0.619 12.5 -- 0.823 -2.69 -- -- 0.172 17.5 18.53 47520 -- --
220.31 0.694 12.2 3.24 -- -- -- -- 1.17 -- -- -- -- --
467.73 1.01 12.3 -- 0.758 -- -- -- 0.824 17.9 -- -- -- --
211.78 0.678 12.4 -- -- -2.66 -- -- 0.161 -- 18.54 47520 -- --
497.5 1.04 12.3 -- -- -- -- -- 0.809 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 122.58 wind 9 14400 > th dose dependent rect. 20 19
2 123.02 wind 9 14400 > th dose dependent rect. 18 21
3 123.06 wind 1 43200 < th dose dependent rect. 22 4
7 124.24 wind 9 14400 > th dose independent rect. 18 21
11 124.64 wind 9 14400 > th dose independent rect. 20 19
12 124.71 wind 1 43200 < th dose dependent rect. 24 1
15 125.21 wind 1 43200 < th dose dependent rect. 20 6
17 125.61 wind 7 14400 > th dose dependent rect. 3 12
20 125.77 humidity 70 43200 < th dose dependent rect. 10 1
22 125.99 wind 7 14400 > th dose dependent rect. 23 16
27 126.29 temperature 25 4320 > th dose dependent rect. 6 3
29 126.43 humidity 60 43200 > th dose independent rect. 10 2
33 126.50 temperature 25 4320 > th dose dependent rect. 8 1
36 126.63 wind 7 14400 > th dose dependent rect. 13 1
39 126.73 wind 1 43200 < th dose dependent rect. 18 8
52 127.60 humidity 80 14400 > th dose independent rect. 21 2
55 127.73 wind 9 14400 < th dose independent rect. 18 22
56 127.74 radiation 20 43200 > th dose independent rect. 15 18
57 127.75 wind 7 14400 > th dose dependent rect. 12 3
58 127.76 temperature 30 4320 < th dose independent sin 5 NA
64 127.93 temperature 30 4320 < th dose independent rect. 18 22
68 128.11 wind 3 43200 > th dose dependent rect. 13 1
69 128.13 wind 7 14400 > th dose dependent rect. 9 6
71 128.17 temperature 30 4320 < th dose independent rect. 20 20
73 128.17 temperature 30 4320 > th dose independent rect. 18 22
77 128.20 temperature 30 4320 < th dose independent rect. 22 18
83 128.26 wind 9 14400 < th dose independent rect. 20 19
86 128.30 temperature 25 4320 > th dose dependent rect. 21 14
87 128.31 temperature 30 4320 < th dose independent rect. 2 14
90 128.34 temperature 30 4320 < th dose independent rect. 4 12
92 128.34 temperature 30 4320 < th dose independent rect. 14 22
104 128.42 temperature 30 4320 < th dose independent rect. 8 8
106 128.43 radiation 40 43200 < th dose independent rect. 12 1
117 128.50 radiation 40 43200 < th dose independent rect. 12 20
118 128.51 wind 7 14400 > th dose independent rect. 3 12
121 128.54 temperature 30 4320 > th dose independent rect. 8 8
135 128.55 radiation 20 43200 < th dose independent rect. 15 1
136 128.55 radiation 40 43200 < th dose independent rect. 12 7
139 128.56 radiation 40 43200 < th dose independent rect. 12 5
145 128.57 temperature 30 4320 > th dose independent sin 4 NA
162 128.66 radiation 40 43200 < th dose independent rect. 10 8
179 128.67 radiation 40 43200 < th dose independent rect. 10 16
180 128.67 radiation 40 43200 < th dose independent rect. 10 18
189 128.68 radiation 30 43200 < th dose independent rect. 16 19
194 128.69 radiation 40 43200 < th dose independent rect. 15 23
201 128.74 humidity 60 43200 > th dose independent rect. 24 13
216 128.84 radiation 20 43200 < th dose independent rect. 13 20
218 128.85 radiation 40 43200 < th dose independent sin 18 NA
248 128.92 temperature 25 4320 > th dose dependent rect. 18 17
273 128.98 radiation 40 43200 < th dose independent rect. 5 9
274 128.99 radiation 40 43200 < th dose independent rect. 7 7
294 129.02 radiation 30 43200 < th dose independent rect. 6 5
315 129.06 humidity 60 43200 < th dose independent rect. 24 13
317 129.06 humidity 60 43200 < th dose independent rect. 21 16
345 129.12 radiation 40 43200 < th dose independent rect. 12 23
361 129.17 radiation 40 43200 < th dose independent rect. 7 10
370 129.17 radiation 40 43200 < th dose independent rect. 3 14
380 129.17 radiation 40 43200 < th dose independent rect. 1 16
412 129.18 radiation 40 43200 < th dose independent no NA NA
458 129.18 radiation 40 43200 < th dose independent rect. 18 23
478 129.20 temperature 25 4320 > th dose dependent sin 8 NA
488 129.21 wind 3 43200 < th dose dependent rect. 21 1
504 129.26 radiation 20 43200 < th dose independent rect. 7 2
566 129.33 wind 7 14400 > th dose independent rect. 23 16
581 129.36 radiation 10 43200 < th dose dependent rect. 6 1
608 129.42 radiation 30 43200 < th dose independent sin 10 NA
609 129.43 radiation 20 43200 > th dose independent sin 12 NA
656 129.61 radiation 40 43200 > th dose dependent rect. 12 1
673 129.66 radiation 20 43200 > th dose dependent rect. 15 19
675 129.67 humidity 60 43200 < th dose independent rect. 10 3
676 129.67 wind 7 14400 < th dose independent rect. 3 13
679 129.69 humidity 60 43200 > th dose independent sin 8 NA
691 129.75 radiation 20 43200 > th dose independent rect. 6 3
709 129.79 radiation 20 43200 < th dose independent rect. 13 6
714 129.79 radiation 20 43200 < th dose independent rect. 13 9
753 129.82 temperature 30 4320 > th dose independent rect. 13 23
778 129.89 temperature 30 4320 < th dose independent rect. 8 23
789 129.90 temperature 30 4320 < th dose independent rect. 22 23
790 129.91 temperature 30 4320 < th dose independent no NA NA
796 129.91 temperature 30 4320 < th dose independent rect. 2 23
797 129.91 temperature 30 4320 < th dose independent rect. 4 23
798 129.91 temperature 30 4320 < th dose independent rect. 6 23
808 129.93 radiation 20 43200 > th dose independent rect. 15 1
810 129.93 temperature 30 4320 < th dose independent rect. 4 21
933 129.97 temperature 30 4320 < th dose independent rect. 8 19
976 129.99 temperature 30 4320 < th dose independent rect. 8 17
978 129.99 temperature 30 4320 < th dose independent rect. 2 19
983 129.99 radiation 40 43200 > th dose dependent rect. 12 20