Os02g0812600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0812600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 380.81 | 0.917 | 3.62 | -1.93 | 0.227 | -7.08 | 0.158 | 35 | -0.241 | 20 | 1000 | 283 | -- | -- |
| 396.66 | 0.935 | 3.23 | 0.233 | 0.237 | -0.811 | 0.363 | -- | -0.244 | 21.1 | 1000 | 283 | -- | -- |
| 380.86 | 0.909 | 3.62 | -1.94 | 0.229 | -7.09 | -- | 35 | -0.24 | 19.7 | 1000 | 283 | -- | -- |
| 393.84 | 0.924 | 3.23 | 0.204 | 0.224 | -0.875 | -- | -- | -0.236 | 20.7 | 1001 | 220 | -- | -- |
| 383.69 | 0.912 | 3.61 | -1.95 | -- | -7.13 | -- | 35.2 | -0.244 | -- | 1000 | 283 | -- | -- |
| 414.67 | 0.955 | 3.24 | 0.375 | 0.238 | -- | 0.288 | -- | -0.297 | 20.6 | -- | -- | -- | -- |
| 414.87 | 0.954 | 3.24 | 0.367 | 0.244 | -- | -- | -- | -0.296 | 20.1 | -- | -- | -- | -- |
| 396.67 | 0.928 | 3.22 | 0.206 | -- | -0.884 | -- | -- | -0.236 | -- | 1001 | 229 | -- | -- |
| 394.95 | 0.926 | 3.23 | -- | 0.223 | -0.91 | -- | -- | -0.254 | 20.6 | 1001 | 227 | -- | -- |
| 418.12 | 0.955 | 3.24 | 0.365 | -- | -- | -- | -- | -0.299 | -- | -- | -- | -- | -- |
| 418.42 | 0.957 | 3.25 | -- | 0.242 | -- | -- | -- | -0.337 | 20.2 | -- | -- | -- | -- |
| 397.76 | 0.929 | 3.23 | -- | -- | -0.919 | -- | -- | -0.255 | -- | 1001 | 229 | -- | -- |
| 421.63 | 0.958 | 3.24 | -- | -- | -- | -- | -- | -0.34 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 378.15 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 20 | 22 |
| 8 | 380.07 | radiation | 40 | 90 | > th | dose independent | rect. | 15 | 1 |
| 25 | 380.07 | radiation | 40 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 43 | 380.58 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 8 | 22 |
| 55 | 381.14 | atmosphere | 1000 | 270 | > th | dose independent | no | NA | NA |
| 62 | 381.40 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 68 | 381.68 | atmosphere | 1000 | 270 | < th | dose independent | no | NA | NA |
| 79 | 381.93 | wind | 1 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 80 | 381.96 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 17 | 23 |
| 85 | 382.13 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 14 | 23 |
| 93 | 382.42 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 99 | 382.69 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 1 | 23 |
| 122 | 383.30 | humidity | 70 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 126 | 383.39 | humidity | 70 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 138 | 383.87 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 23 | 20 |
| 146 | 383.97 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 14 | 22 |
| 164 | 384.33 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 17 |
| 205 | 384.90 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 5 | 23 |
| 207 | 384.91 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 17 | 23 |
| 209 | 384.92 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 1 | 23 |
| 211 | 384.92 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 23 | 23 |
| 264 | 385.65 | humidity | 70 | 30 | < th | dose independent | rect. | 15 | 1 |
| 270 | 385.70 | atmosphere | 1000 | 10 | > th | dose independent | no | NA | NA |
| 323 | 386.30 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 339 | 386.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 371 | 386.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 12 |
| 378 | 386.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 411 | 386.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 15 |
| 418 | 387.05 | atmosphere | 1000 | 270 | < th | dose independent | sin | 13 | NA |
| 438 | 387.20 | atmosphere | 1000 | 270 | > th | dose independent | sin | 14 | NA |
| 446 | 387.31 | atmosphere | 1000 | 10 | < th | dose independent | sin | 9 | NA |
| 473 | 387.54 | humidity | 70 | 10 | < th | dose dependent | sin | 12 | NA |
| 484 | 387.60 | humidity | 70 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 568 | 387.99 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 5 |
| 610 | 388.23 | wind | 1 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 616 | 388.25 | wind | 1 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 676 | 388.68 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 21 | 15 |
| 724 | 388.96 | atmosphere | 1000 | 30 | > th | dose independent | sin | 11 | NA |
| 751 | 389.10 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 21 | 13 |
| 827 | 389.26 | wind | 1 | 90 | < th | dose independent | rect. | 13 | 8 |
| 863 | 389.40 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 21 | 10 |
| 934 | 389.94 | wind | 1 | 90 | < th | dose independent | rect. | 11 | 12 |
| 938 | 389.97 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 16 | 23 |
| 960 | 390.11 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 999 | 390.32 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 21 | 10 |