BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0812600 Os02g0812600|Os02g0812600
(485 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0812600 Cyclin-like F-box domain containing protein 864 0.0
Os02g0813133 Galactose-binding like domain containing protein 543 e-155
Os02g0813300 Cyclin-like F-box domain containing protein 290 2e-78
Os02g0813166 Cyclin-like F-box domain containing protein 197 1e-50
AK110304 182 6e-46
Os12g0129700 Cyclin-like F-box domain containing protein 174 2e-43
Os02g0812700 Cyclin-like F-box domain containing protein 166 4e-41
Os02g0812500 Cyclin-like F-box domain containing protein 160 2e-39
Os12g0486900 Protein kinase domain containing protein 133 3e-31
Os08g0150700 Cyclin-like F-box domain containing protein 129 6e-30
Os01g0158400 Galactose-binding like domain containing protein 106 4e-23
Os12g0131600 Cyclin-like F-box domain containing protein 94 2e-19
Os04g0280500 Conserved hypothetical protein 88 2e-17
>Os02g0812600 Cyclin-like F-box domain containing protein
Length = 485
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/472 (90%), Positives = 429/472 (90%)
Query: 14 RLPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDLPRLADGELSPPPP 73
RLPEELLVAALSLTSPRDACS SDAVWSRFLPRDLPRLADGELSPPPP
Sbjct: 14 RLPEELLVAALSLTSPRDACSAAAVCRDFRAAADSDAVWSRFLPRDLPRLADGELSPPPP 73
Query: 74 STKGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDS 133
STKG HELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDS
Sbjct: 74 STKGLFLRLSAAPLLLPHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDS 133
Query: 134 RLEGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGST 193
RLEGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGST
Sbjct: 134 RLEGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGST 193
Query: 194 TTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCISFRE 253
TTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCISFRE
Sbjct: 194 TTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCISFRE 253
Query: 254 TEGHWKRGLVVQGIEIRPKKTLTSNCLACSHEKPSYSLLTTSRSSKEEIFLTDGLTSMWL 313
TEGHWKRGLVVQGIEIRPKKTLTSNCLACSHEKPSYSLLTTSRSSKEEIFLTDGLTSMWL
Sbjct: 254 TEGHWKRGLVVQGIEIRPKKTLTSNCLACSHEKPSYSLLTTSRSSKEEIFLTDGLTSMWL 313
Query: 314 DMETGFKCYMLSARALQLANSTDTWRLISLTGASRFSEVIELPACYELVICGKIPCKMLP 373
DMETGFKCYMLSARALQLANSTDTWRLISLTGASRFSEVIELPACYELVICGKIPCKMLP
Sbjct: 314 DMETGFKCYMLSARALQLANSTDTWRLISLTGASRFSEVIELPACYELVICGKIPCKMLP 373
Query: 374 GNTNYAAYIVFVVVDDSFGLATILDASVSVGGSLCTTRQVCFDSTSSLSADEHFVEDNIE 433
GNTNYAAYIVFVVVDDSFGLATILDASVSVGGSLCTTRQVCFDSTSSLSADEHFVEDNIE
Sbjct: 374 GNTNYAAYIVFVVVDDSFGLATILDASVSVGGSLCTTRQVCFDSTSSLSADEHFVEDNIE 433
Query: 434 VPQDGSVILPQERXXXXXXXXXXXXXXXXXRWLSKRGLVVQGIEIRPKKSGC 485
VPQDGSVILPQER RWLSKRGLVVQGIEIRPKKSGC
Sbjct: 434 VPQDGSVILPQERDDGLDGAGGGVLEAEDGRWLSKRGLVVQGIEIRPKKSGC 485
>Os02g0813133 Galactose-binding like domain containing protein
Length = 472
Score = 543 bits (1400), Expect = e-155, Method: Compositional matrix adjust.
Identities = 307/491 (62%), Positives = 341/491 (69%), Gaps = 52/491 (10%)
Query: 14 RLPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDLPRLADGELSPPPP 73
RLPEELLV LSLT PRDA SDAVWSRFLPR LPRLA EL PP
Sbjct: 13 RLPEELLVEVLSLTGPRDA---------SRAAADSDAVWSRFLPRGLPRLARRELPRSPP 63
Query: 74 ST---KGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPL 130
K +L SMWL+REKG KCYMLSARALQI+WGD+P+YW WIPL
Sbjct: 64 PPPSRKAHFLRLSAGPLLLPRKLMSMWLDREKGAKCYMLSARALQISWGDSPQYWSWIPL 123
Query: 131 TDSRL-EGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSI 189
DSR EGAELLSVCWLEI GK+ K LS+NTNYAAYLVY+IADRSYGLDFPFQEASVSI
Sbjct: 124 ADSRFKEGAELLSVCWLEIRGKLPGKKLSQNTNYAAYLVYKIADRSYGLDFPFQEASVSI 183
Query: 190 GGSTTTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCI 249
GGS T RQV +DIE+PQKR+DGWMELKLGELYNEEGDDGEVCI
Sbjct: 184 GGSITARQV------------------KDIENPQKRADGWMELKLGELYNEEGDDGEVCI 225
Query: 250 SFRETEG-HWKRGLVVQGIEIRPKKTLTSNCLACSHEKPSYSLLTTSRSSKEEIFLTDGL 308
SF ET+G HWK GLVVQGIEIRPKK+ N LACSHEKPS S LTT +S EEIFL+DGL
Sbjct: 226 SFMETKGGHWKSGLVVQGIEIRPKKSPPLNSLACSHEKPSCSTLTTLQSCMEEIFLSDGL 285
Query: 309 TSMWLDMETGFKCYMLSARALQLANSTDTWRLISLTGASRFSEVIELPACYELVICGKIP 368
TSMWLD ETGFKCYMLSARALQ+ N T +WR ISLTG+SRFSEV+E Y + +CGKIP
Sbjct: 286 TSMWLDRETGFKCYMLSARALQIVNLTHSWRWISLTGSSRFSEVVEFLKGYRVEVCGKIP 345
Query: 369 CKMLPGNTNYAAYIVFVVVDDSFGLATILDASVSVGGSLCTTRQVCFDSTSSLSADEHFV 428
CKML GN+NYAAYIVFVV +DS GLA++ A+V VGG +TRQVC DS++ ++++
Sbjct: 346 CKMLSGNSNYAAYIVFVVAEDSCGLASVWVATVGVGGRQ-STRQVCLDSSNR---NDYYY 401
Query: 429 EDNIEVPQDGSVILPQERX----------------XXXXXXXXXXXXXXXXRWLSKRGLV 472
E IEVPQDGSVILPQER RWLS GLV
Sbjct: 402 EGEIEVPQDGSVILPQERADGWMELELGEFYNQEGNNQGEVCFSLVKPKAGRWLSNGGLV 461
Query: 473 VQGIEIRPKKS 483
+QGIEIRPK S
Sbjct: 462 IQGIEIRPKIS 472
>Os02g0813300 Cyclin-like F-box domain containing protein
Length = 297
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/284 (56%), Positives = 186/284 (65%), Gaps = 23/284 (8%)
Query: 14 RLPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDLPRLADGELSPPPP 73
RLPEELL AA+S SPRDAC SDAVW+ FLPR+LP LADGELSP P
Sbjct: 13 RLPEELLSAAISRASPRDACHAAAVSPAFRAAADSDAVWASFLPRNLPDLADGELSPAPA 72
Query: 74 STKGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDS 133
S K L SMWL+RE G KCYMLSAR+L I WGDTP YWRWIPLTDS
Sbjct: 73 SKKELFLRLSDGPYLLSDRLMSMWLDRETGAKCYMLSARSLVIIWGDTPHYWRWIPLTDS 132
Query: 134 RL-EGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGS 192
R EGAEL+ VCWLEI G+I SKMLS N+ YAAY+V++IAD YGLD PFQEASVS+GG
Sbjct: 133 RFAEGAELIDVCWLEIRGRIHSKMLSPNSTYAAYMVFKIADEFYGLDAPFQEASVSLGGR 192
Query: 193 TTTR---------------------QVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWME 231
+T+ +G + RR RR LVL E + PQKR+D WME
Sbjct: 193 GSTKIVCVQSYDSEDEEVPENYWPMSIGPLLRRRARRRDRRLVLDEGVTVPQKRTDEWME 252
Query: 232 LKLGELYNEEGDDGEVCISFRETE-GHWKRGLVVQGIEIRPKKT 274
L++GE NEEG+DGEVC S ET+ G+WKRGL+VQGIEIR KK+
Sbjct: 253 LEMGEFINEEGEDGEVCFSLMETKGGNWKRGLIVQGIEIRLKKS 296
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 116/237 (48%), Gaps = 50/237 (21%)
Query: 292 LTTSRSSKEEIFL---------TDGLTSMWLDMETGFKCYMLSARALQL--ANSTDTWRL 340
L+ + +SK+E+FL +D L SMWLD ETG KCYMLSAR+L + ++ WR
Sbjct: 67 LSPAPASKKELFLRLSDGPYLLSDRLMSMWLDRETGAKCYMLSARSLVIIWGDTPHYWRW 126
Query: 341 ISLTGASRFSEVIELPACYELVICGKIPCKMLPGNTNYAAYIVFVVVDDSFGL-ATILDA 399
I LT SRF+E EL L I G+I KML N+ YAAY+VF + D+ +GL A +A
Sbjct: 127 IPLTD-SRFAEGAELIDVCWLEIRGRIHSKMLSPNSTYAAYMVFKIADEFYGLDAPFQEA 185
Query: 400 SVSVGGSLCTTRQVCFDSTSSLSADEHFVED-----------------NIEVPQDGSVIL 442
SVS+GG +T+ VC S S DE E+ + + D V +
Sbjct: 186 SVSLGGR-GSTKIVCVQSYD--SEDEEVPENYWPMSIGPLLRRRARRRDRRLVLDEGVTV 242
Query: 443 PQERXXXXXXXXX---------------XXXXXXXXRWLSKRGLVVQGIEIRPKKSG 484
PQ+R W KRGL+VQGIEIR KKSG
Sbjct: 243 PQKRTDEWMELEMGEFINEEGEDGEVCFSLMETKGGNW--KRGLIVQGIEIRLKKSG 297
>Os02g0813166 Cyclin-like F-box domain containing protein
Length = 262
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 150/268 (55%), Gaps = 24/268 (8%)
Query: 14 RLPEELLVAALSLTSPR--DACSXXXXXXXXXXXXXSDAVWSRFLPRDLPRLADGELSPP 71
RLP ELL A +S +PR DAC SD VWSRFLPRD+P LADGELSPP
Sbjct: 10 RLPVELLSAVISRAAPRPRDACRASAVSPAFRAAADSDDVWSRFLPRDVPDLADGELSPP 69
Query: 72 PPSTKG---XXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWI 128
PPS K L +W +RE G KCY+LSAR L I +T Y RWI
Sbjct: 70 PPSNKALFLRLSGSDGNVPLLPDRLRGIWFDRETGAKCYVLSARTLVIKCSETSDYRRWI 129
Query: 129 PLTDSRL-EGAELLSV-CWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEAS 186
PL DSR E E + +EI KI S +L+ N+ YAA++V++IAD Y LD +A+
Sbjct: 130 PLADSRFAEAVEFMDAPPRMEIRSKIDSMVLTPNSTYAAFMVFKIADGLYELDTSPHDAT 189
Query: 187 VSIGGSTTTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGE 246
VSIG + + R+V R +P++R+DGWME++LGE +NE+G+DG
Sbjct: 190 VSIGENESRREVAFTGR-----------------YPERRADGWMEVELGEFFNEDGEDGA 232
Query: 247 VCISFRETEGHWKRGLVVQGIEIRPKKT 274
V + + RGL+V GIEIR K++
Sbjct: 233 VYMRLMSEGPNRMRGLIVLGIEIRMKRS 260
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 101/212 (47%), Gaps = 45/212 (21%)
Query: 291 LLTTSRSSKEEIFLTDGLTSMWLDMETGFKCYMLSARALQL--ANSTDTWRLISLTGASR 348
L S S L D L +W D ETG KCY+LSAR L + + ++D R I L SR
Sbjct: 77 FLRLSGSDGNVPLLPDRLRGIWFDRETGAKCYVLSARTLVIKCSETSDYRRWIPLAD-SR 135
Query: 349 FSEVIE-LPACYELVICGKIPCKMLPGNTNYAAYIVFVVVDDSFGLAT-ILDASVSVGGS 406
F+E +E + A + I KI +L N+ YAA++VF + D + L T DA+VS+G +
Sbjct: 136 FAEAVEFMDAPPRMEIRSKIDSMVLTPNSTYAAFMVFKIADGLYELDTSPHDATVSIGEN 195
Query: 407 LCTTRQVCF---------DSTSSLSADEHFVEDNIEVPQDGSVILPQERXXXXXXXXXXX 457
+ R+V F D + E F ED +DG+V +
Sbjct: 196 E-SRREVAFTGRYPERRADGWMEVELGEFFNEDG----EDGAVYM--------------- 235
Query: 458 XXXXXXRWLSK-----RGLVVQGIEIRPKKSG 484
R +S+ RGL+V GIEIR K+SG
Sbjct: 236 ------RLMSEGPNRMRGLIVLGIEIRMKRSG 261
>AK110304
Length = 173
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 124/178 (69%), Gaps = 8/178 (4%)
Query: 98 LEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDSRL-EGAELLSVCWLEIHGKILSKM 156
L+RE G KCY+LSARAL I W TPRYWRWIPLTDSR E AELLSVCWLEI G I S+M
Sbjct: 1 LDRETGAKCYVLSARALVIIWTCTPRYWRWIPLTDSRFTEAAELLSVCWLEILGNIDSRM 60
Query: 157 LSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGSTTTRQVGSVERRLKRRCSHALVLA 216
LS N+ YAA LV++IA+ Y LD +A+V++GGS ++R+V R + + VL
Sbjct: 61 LSPNSTYAAVLVFKIAEEFYQLDTI--DATVNLGGSKSSREVALTRSRRRPEEEISAVL- 117
Query: 217 EDIEHPQKRSDGWMELKLGELYNEEGDDGEVCISFRETEGHWKRGLVVQGIEIRPKKT 274
P+ R+DGWME++LGE +NEEG+DG V I +WK+GL+V GIEIR +K+
Sbjct: 118 ----FPRTRADGWMEVELGEFFNEEGEDGNVNIRIFGKGPNWKKGLIVLGIEIRIRKS 171
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 94/195 (48%), Gaps = 46/195 (23%)
Query: 313 LDMETGFKCYMLSARALQL--ANSTDTWRLISLTGASRFSEVIELPACYELVICGKIPCK 370
LD ETG KCY+LSARAL + + WR I LT SRF+E EL + L I G I +
Sbjct: 1 LDRETGAKCYVLSARALVIIWTCTPRYWRWIPLTD-SRFTEAAELLSVCWLEILGNIDSR 59
Query: 371 MLPGNTNYAAYIVFVVVDDSFGLATILDASVSVGGSLCTTRQVCF--------------- 415
ML N+ YAA +VF + ++ + L TI DA+V++GGS ++R+V
Sbjct: 60 MLSPNSTYAAVLVFKIAEEFYQLDTI-DATVNLGGS-KSSREVALTRSRRRPEEEISAVL 117
Query: 416 ------DSTSSLSADEHFVEDNIEVPQDGSVILPQERXXXXXXXXXXXXXXXXXRWLSKR 469
D + E F E+ +DG+V + W K+
Sbjct: 118 FPRTRADGWMEVELGEFFNEEG----EDGNVNI--------------RIFGKGPNW--KK 157
Query: 470 GLVVQGIEIRPKKSG 484
GL+V GIEIR +KSG
Sbjct: 158 GLIVLGIEIRIRKSG 172
>Os12g0129700 Cyclin-like F-box domain containing protein
Length = 373
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 146/278 (52%), Gaps = 27/278 (9%)
Query: 15 LPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRD-LPRLADGELSPPPP 73
L E+ L A+SLT+P DAC SD+VW FLP+D L LA +
Sbjct: 98 LSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFT 157
Query: 74 STKGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDS 133
S K S+WLER KCY+LS+R+L I W D P WRWI L DS
Sbjct: 158 SEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDS 217
Query: 134 RLEGA-ELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGS 192
R E ELL VCWL++ G++ + LS NT YAAYLV+++ D SYGLD QEA +++
Sbjct: 218 RFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQ 277
Query: 193 T-------------------TTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELK 233
+TR+ S R++ AE+ +P++R DGW+E++
Sbjct: 278 VVSAKRTISFYPRPRPRPRPSTRETLSNMGRIEEAGQ-----AEEPSYPRERGDGWLEVQ 332
Query: 234 LGELYNEEGDDGEVCISFRE-TEGHWKRGLVVQGIEIR 270
LG YN+ D G V I +E + +WK+GL+++G+EIR
Sbjct: 333 LGHFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIR 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 299 KEEIFLTDGLTSMWLDMETGFKCYMLSARALQLA--NSTDTWRLISLTGASRFSEVIELP 356
K+ + L S+WL+ + KCY+LS+R+L +A + WR ISL SRF EV EL
Sbjct: 168 KDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPD-SRFEEVTELL 226
Query: 357 ACYELVICGKIPCKMLPGNTNYAAYIVFVVVDDSFGL 393
L +CG++ C+ L NT YAAY+VF + DDS+GL
Sbjct: 227 KVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGL 263
>Os02g0812700 Cyclin-like F-box domain containing protein
Length = 225
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 139/263 (52%), Gaps = 51/263 (19%)
Query: 14 RLPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDLP-RLADGELSPPP 72
RLP+++L + L +PRDAC SD VW +F P D +LADGEL PPP
Sbjct: 8 RLPQDVLQRVIPLETPRDACRAAAVSPAFRAIADSDVVWGKFQPDDSSLQLADGELFPPP 67
Query: 73 PSTKGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTD 132
S K ER ++ S P + +
Sbjct: 68 RSKK----------------------ER------FLAS-----------PPAYSSFQIGS 88
Query: 133 SRLEGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGS 192
EGAEL+ VCW+EI I SKMLS N+ YAA++V++IA+ YGLD P QE +VS+GG
Sbjct: 89 GFEEGAELIDVCWMEIRCNIDSKMLSPNSTYAAFMVFKIAEGFYGLDTPLQEGTVSLGGR 148
Query: 193 TTTRQVG--SVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCIS 250
+ R+V S++ R + + +PQKR+DGWME++LGE +NE G+DGEV IS
Sbjct: 149 ESRREVAFTSIDPRPPQGSAA---------YPQKRADGWMEVELGEFFNENGEDGEVGIS 199
Query: 251 FRETEGHWKRGLVVQGIEIRPKK 273
+WKRGL+V GIEIR K+
Sbjct: 200 LMSKGPNWKRGLIVLGIEIRLKE 222
>Os02g0812500 Cyclin-like F-box domain containing protein
Length = 332
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 150/312 (48%), Gaps = 51/312 (16%)
Query: 14 RLPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRD----LPRLADGELS 69
RLPEE + A+S+T+P DAC SDAVW FLP D L R DG +
Sbjct: 13 RLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDGIAA 72
Query: 70 PPPPSTKGXXXXXXXXXXXXXHELT-SMWLEREKGGKCYMLSARALQITWGDTPRYWRWI 128
++K + T S L+R G KC MLSARAL I WGD P WRW
Sbjct: 73 AGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRWRWT 132
Query: 129 P-LTDSRL-EGAELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLD----FPF 182
P L SR E AELL VCWLEI GK+ +LS T YAAYLVY AD + GL+ P
Sbjct: 133 PGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGLECNIGMPT 192
Query: 183 QEASVSI---GGSTTTR-------------------QVGSVER---------RLKRRCSH 211
A+V++ G TT+R +G E RL++
Sbjct: 193 PMATVTVVSGAGGTTSRPPAAPATTTTTEQHKICLQHMGEEETIMHRQELVIRLRKAFGR 252
Query: 212 ALVLAE--DIEHPQKRS-----DGWMELKLGELY--NEEGDDGEVCISFRETEGHWKRGL 262
+ DI P+ R GW E++LGE G+DG V +SF+E G WK GL
Sbjct: 253 TVRFDPDMDIRCPRPRDGGGGGGGWREVELGEFAVPAAGGEDGVVEVSFKEETGRWKTGL 312
Query: 263 VVQGIEIRPKKT 274
+VQGIE+RPK T
Sbjct: 313 IVQGIELRPKCT 324
>Os12g0486900 Protein kinase domain containing protein
Length = 449
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Query: 95 SMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDSRL-EGAELLSVCWLEIHGKIL 153
S WL+ KCYMLS+R L++TWG++P +W+WI L DSR E AELL+V WL + G+I
Sbjct: 269 SFWLDATSNAKCYMLSSRLLKVTWGESPEHWKWITLPDSRFAECAELLNVYWLAVIGEIA 328
Query: 154 SKMLSRNTNYAAYLVYRIADRSYGL-DFPFQEASVSIGGSTTTRQVGSVERRLKRRCSHA 212
++ L+ T YA YLVY++ S GL Q +S+ + G T G V + +
Sbjct: 329 TEDLTPGTRYAVYLVYKLTGTSVGLRGGQTQRSSLRLYGEITV-STGKVSVDVVPAAARG 387
Query: 213 LVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGE--VCISFRETEGHWKR-GLVVQGIEI 269
+A + +P R DGWMELKL E +E GE V + FRE H K+ GLV++G+E
Sbjct: 388 --MAAGVAYPVARGDGWMELKLAEFAADEKLLGEKKVIVDFREENDHVKKSGLVIEGMEF 445
Query: 270 RPKK 273
RP K
Sbjct: 446 RPNK 449
>Os08g0150700 Cyclin-like F-box domain containing protein
Length = 299
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 15 LPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDL-------PRLADGE 67
LPE L ++LTSPRDAC SDAVW RFLP D P A
Sbjct: 23 LPEACLADVIALTSPRDACRLAAVSPSFRAAAESDAVWDRFLPPDYRAIAPLPPPPATAA 82
Query: 68 LSPPPPSTKGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRW 127
S KG +WLE+E G KC+ L AR L + W D WRW
Sbjct: 83 ASGGKRMKKGVYLGLCDKPVPVDDGSMMVWLEKESGAKCFALPARKLSLPWEDGEFSWRW 142
Query: 128 IPLTDSRLEG-AELLSVCWLEIHGKILSKMLSRNTNYAAYLVY---RIADRSYGLDFPFQ 183
P SR E A+L+ L+I+G++ + L+ T YAAYLV+ A+ GL FP Q
Sbjct: 143 TPHPLSRFEEVAQLVDCTCLDIYGRLPAAALTPATPYAAYLVFGTAAAAEGHRGLSFPDQ 202
Query: 184 EASVSIGGSTTTRQV-----GSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELKLGELY 238
E +VS G R E R R A + P +R DGW E++LG +
Sbjct: 203 ETTVSAAGRVVARHAVCLRPDDAEARKFRGVGLAGA-GVPVRRPARRGDGWSEMELGRVA 261
Query: 239 NEE--GDDGEVCISFRETEGHW-KRGLVVQGIEIRP 271
+E G GE ++ E G + KRGLVV+ +E RP
Sbjct: 262 ADEVAGAGGEDVVASFEVLGWYPKRGLVVECMEFRP 297
>Os01g0158400 Galactose-binding like domain containing protein
Length = 244
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 30/186 (16%)
Query: 97 WLEREKGGKCYMLSARALQITWGDTPRYWRWIPL--------TDSRLEGAELLSVCWLEI 148
W++ C+ML R L ITW + PR+W W PL TD+++E L +VCWLEI
Sbjct: 80 WVDERTRNNCFMLFPRGLSITWSEDPRFWTWKPLKEGSSDADTDTQIEVPSLQNVCWLEI 139
Query: 149 HGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGSTTTRQVGSVERRLKRR 208
HGK+ L+ Y + D +YG P + T ++ ++E +++ +
Sbjct: 140 HGKLERSYLTPGVTYEVLFEVMLIDPAYGWSVPVN-LQLKFPDGTVQQRKENLEEKIRMK 198
Query: 209 CSHALVLAEDIEHPQKRSDGWMELKLGELYNEEGDDGEVCISFRETEGH-WKRGLVVQGI 267
W+ELK+GE+ ++G GE+ IS E +G WKRGL+++GI
Sbjct: 199 --------------------WLELKVGEVKTQQGQKGEIEISMFEYDGGLWKRGLLIKGI 238
Query: 268 EIRPKK 273
+I PK+
Sbjct: 239 KILPKQ 244
>Os12g0131600 Cyclin-like F-box domain containing protein
Length = 185
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 14 RLPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDLPRLADGELSPP-- 71
RLPE L A+S T+P DAC S+AVW RFLP D + P
Sbjct: 32 RLPEACLAHAISFTTPTDACRCSAVSADFQAAASSNAVWERFLPPDYHSILARADDPVDF 91
Query: 72 PPSTKGXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLT 131
S K S WLER G KCY+LS+R+L+I WGD RYWRWI L
Sbjct: 92 TTSNKELFLSLAQDHVLLDQRSKSFWLERTSGAKCYLLSSRSLEIAWGDDARYWRWIYLP 151
Query: 132 DSRL 135
DSR
Sbjct: 152 DSRF 155
>Os04g0280500 Conserved hypothetical protein
Length = 323
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 128/312 (41%), Gaps = 59/312 (18%)
Query: 15 LPEELLVAALSLTSPRDACSXXXXXXXXXXXXXSDAVWSRFLPRDLPRLADGELSPPPPS 74
LP + + SLTSP DAC SD VW FLP + DG+ P
Sbjct: 18 LPMDCIACIASLTSPGDACRLAAAAAALRPVADSDDVWGSFLPPEWA--GDGDALDGKPG 75
Query: 75 TK---------------------GXXXXXXXXXXXXXHELTSMWLEREKGGKCYMLSARA 113
+ G S LE+ G K YM+ ARA
Sbjct: 76 GREGESKKEMFLRLCDLPVLLDGGKLYWAFSSLISLLSLHQSFSLEKRSGAKKYMMRARA 135
Query: 114 LQITWGDTPRY-WRWIP-LTDSRLEGAELLS-VCWLEIHGKILSKMLSRNTNYAAYLVYR 170
L W P WI DSR +LS +CWL+I+G +K LS T+Y AYLVY
Sbjct: 136 LGFGWSGYPYGGLVWIQNHPDSRFSEVAILSHLCWLDIYGIFNTKHLSNGTSYGAYLVYN 195
Query: 171 IA-----DRSYGLDFPFQEASVSIGGSTTTRQVGSVERRLKRRCSHALVLAEDIE----- 220
+ D++ G + Q+A+ S ST++ + ++ +L+ D +
Sbjct: 196 VQFLHTEDQNGG--YKEQDATASGSSSTSSICSHECNHLMPQKHLRSLLFNMDYDGSSFV 253
Query: 221 ---HPQK----------RSDGWMELKLG------ELYNEEGDDGEVCISFRETEGHWKRG 261
+ QK RSDGWME ++ + NEE +G++ I FR G +
Sbjct: 254 KTNNNQKKELKYVGICVRSDGWMEQEISTEISVVKQNNEE--NGDISIEFRGLTGSHQCQ 311
Query: 262 LVVQGIEIRPKK 273
++V+GIEIRPK
Sbjct: 312 IIVEGIEIRPKN 323
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,682,351
Number of extensions: 618373
Number of successful extensions: 1396
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1343
Number of HSP's successfully gapped: 18
Length of query: 485
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 380
Effective length of database: 11,553,331
Effective search space: 4390265780
Effective search space used: 4390265780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)