Os02g0813300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0813300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.86 | 0.342 | 12.3 | -0.512 | 3 | 2.62 | 0.696 | -0.0901 | 0.0828 | 20.3 | 0.6502 | 269 | 20.9 | -- |
| 52.86 | 0.339 | 12.3 | -0.518 | 2.99 | 2.62 | 0.752 | -- | 0.0813 | 20.3 | 0.66 | 268 | 20.8 | -- |
| 53.83 | 0.342 | 12.3 | -0.546 | 2.98 | 2.64 | -- | -0.375 | 0.081 | 20.4 | 0.59 | 268 | 20.7 | -- |
| 54.51 | 0.344 | 12.3 | -0.553 | 2.95 | 2.66 | -- | -- | 0.0735 | 20.4 | 0.5807 | 268 | 20.6 | -- |
| 89.85 | 0.441 | 12.2 | -0.419 | -- | 3.15 | -- | 0.245 | 0.0898 | -- | -47.95 | 2363 | 20.9 | -- |
| 89.73 | 0.444 | 12.2 | -0.432 | 3.15 | -- | 0.451 | -- | 0.0864 | 16.8 | -- | -- | -- | -- |
| 90.26 | 0.445 | 12.2 | -0.43 | 3.15 | -- | -- | -- | 0.0887 | 16.8 | -- | -- | -- | -- |
| 90.26 | 0.442 | 12.2 | -0.429 | -- | 3.15 | -- | -- | 0.0905 | -- | -47.07 | 2368 | 20.9 | -- |
| 62.3 | 0.368 | 12.3 | -- | 2.97 | 2.62 | -- | -- | 0.11 | 20.3 | 0.66 | 266 | 20.8 | -- |
| 616.72 | 1.16 | 12.2 | -0.548 | -- | -- | -- | -- | 0.00678 | -- | -- | -- | -- | -- |
| 95.13 | 0.456 | 12.2 | -- | 3.16 | -- | -- | -- | 0.137 | 16.8 | -- | -- | -- | -- |
| 95.13 | 0.454 | 12.2 | -- | -- | 3.16 | -- | -- | 0.136 | -- | -11.67 | 997 | 21.5 | -- |
| 624.65 | 1.17 | 12.2 | -- | -- | -- | -- | -- | 0.0676 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 2 | 49.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 3 | 49.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 4 | 49.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 5 | 49.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 6 | 49.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 13 | 51.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 14 | 51.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 16 | 51.84 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 20 | 51.87 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 23 | 51.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 24 | 51.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 26 | 51.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 27 | 51.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 30 | 51.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 31 | 51.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 32 | 51.89 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 35 | 51.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 37 | 51.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 38 | 51.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 39 | 51.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 40 | 51.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 43 | 52.00 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 49 | 52.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 50 | 52.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 52 | 52.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 53 | 52.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 56 | 52.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 62 | 52.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 72 | 52.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 3 |
| 73 | 52.14 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 74 | 52.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 76 | 52.21 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 80 | 52.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 81 | 52.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 82 | 52.43 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 120 | 53.12 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 166 | 53.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 168 | 53.84 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 198 | 54.04 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 205 | 54.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 236 | 54.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 241 | 54.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 276 | 54.90 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 302 | 55.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 352 | 55.82 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 371 | 55.90 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 378 | 55.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 380 | 56.01 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 465 | 57.07 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 19 |
| 466 | 57.07 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 498 | 57.47 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 518 | 57.51 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 523 | 57.58 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 525 | 57.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 527 | 57.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 529 | 57.60 | radiation | 30.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 530 | 57.61 | humidity | 70.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 547 | 57.67 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 585 | 58.08 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 586 | 58.08 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 588 | 58.08 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 589 | 58.08 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 591 | 58.08 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 592 | 58.08 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 593 | 58.08 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 608 | 58.19 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 624 | 58.30 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 625 | 58.33 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 627 | 58.33 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 629 | 58.35 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 639 | 58.42 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 640 | 58.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 643 | 58.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 647 | 58.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 652 | 58.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 653 | 58.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 655 | 58.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 658 | 58.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 659 | 58.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 660 | 58.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 663 | 58.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 664 | 58.43 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 669 | 58.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 670 | 58.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 678 | 58.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 694 | 58.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 748 | 58.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 749 | 58.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 775 | 58.73 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 805 | 58.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 806 | 58.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 807 | 58.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 808 | 58.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 850 | 59.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 856 | 59.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 859 | 59.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 861 | 59.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 866 | 59.11 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 904 | 59.24 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 909 | 59.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 929 | 59.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 14 |
| 931 | 59.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 935 | 59.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 955 | 59.54 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 5 |
| 964 | 59.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 971 | 59.64 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 980 | 59.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 983 | 59.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 984 | 59.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 993 | 59.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 19 |