Os09g0525300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os09g0525300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.06 | 0.29 | 12 | 1.49 | 0.528 | 0.72 | 0.143 | 0.122 | 0.413 | 19.8 | 28.72 | 4743 | -- | -- |
| 38.03 | 0.287 | 12 | 1.52 | 0.514 | 0.736 | 0.135 | -- | 0.417 | 19.9 | 28.72 | 4642 | -- | -- |
| 38.07 | 0.287 | 12 | 1.5 | 0.513 | 0.733 | -- | 0.0549 | 0.414 | 19.8 | 28.77 | 4642 | -- | -- |
| 38.07 | 0.287 | 12 | 1.52 | 0.513 | 0.739 | -- | -- | 0.418 | 19.8 | 28.71 | 4642 | -- | -- |
| 50.19 | 0.33 | 11.9 | 1.49 | -- | 0.647 | -- | 0.136 | 0.445 | -- | 29 | 5793 | -- | -- |
| 57.61 | 0.356 | 12 | 1.29 | 0.479 | -- | 0.0608 | -- | 0.372 | 19.7 | -- | -- | -- | -- |
| 57.62 | 0.355 | 12 | 1.29 | 0.48 | -- | -- | -- | 0.372 | 19.7 | -- | -- | -- | -- |
| 50.16 | 0.33 | 11.9 | 1.51 | -- | 0.647 | -- | -- | 0.452 | -- | 29 | 5800 | -- | -- |
| 94.99 | 0.454 | 12 | -- | 0.45 | 0.371 | -- | -- | 0.312 | 19.7 | 29.39 | 7443 | -- | -- |
| 70.02 | 0.391 | 11.9 | 1.29 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 101.65 | 0.472 | 12 | -- | 0.47 | -- | -- | -- | 0.228 | 19.9 | -- | -- | -- | -- |
| 103.62 | 0.474 | 12 | -- | -- | 0.362 | -- | -- | 0.269 | -- | 34.09 | 7179 | -- | -- |
| 113.66 | 0.498 | 12 | -- | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.94 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 2 | 34.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 3 | 34.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 4 | 34.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 34.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 6 | 35.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 7 | 35.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 11 | 35.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 14 | 36.40 | temperature | 10.0 | 720 | > th | dose dependent | sin | 3 | NA |
| 15 | 36.45 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 18 | 36.47 | temperature | 20.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 22 | 36.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 25 | 36.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 26 | 36.61 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 32 | 36.72 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 35 | 36.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 37 | 36.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 77 | 37.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 86 | 37.17 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 88 | 37.18 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 104 | 37.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 111 | 37.30 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 125 | 37.35 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 138 | 37.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 155 | 37.48 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 167 | 37.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 175 | 37.56 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 177 | 37.57 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 183 | 37.61 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 211 | 37.69 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 216 | 37.69 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 224 | 37.72 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 230 | 37.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 247 | 37.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 252 | 37.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 287 | 37.85 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 312 | 37.90 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 334 | 37.94 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 339 | 37.95 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 364 | 37.97 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 402 | 38.04 | temperature | 30.0 | 720 | < th | dose dependent | sin | 3 | NA |
| 428 | 38.09 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 443 | 38.11 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 449 | 38.12 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 459 | 38.14 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 470 | 38.17 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 517 | 38.28 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 522 | 38.30 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 533 | 38.31 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 586 | 38.38 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 22 | NA |
| 621 | 38.42 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 639 | 38.44 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 640 | 38.44 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 683 | 38.49 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 707 | 38.53 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 748 | 38.57 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 756 | 38.58 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 771 | 38.59 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 793 | 38.60 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 807 | 38.61 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 841 | 38.65 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 854 | 38.66 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 901 | 38.71 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 1 |