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Os03g0116700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0259) R2 : 0.813
β1 : 1.07 (0.0947) R2dD : 0.0556 R2D : 0.0296
β2 : 1.54 (0.0801) R2dC : 0.23 R2C : 0.484
β3 : 1.29 (0.0667) R2dE : 0.232 R2E : 0.497
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.577 (0.0552) R2dN8 : 0.0608 R2N8 : 0.0234
σ : 0.483
deviance : 107.77
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C
peak time of C : 20.6
E
wheather : radiation
threshold : 21.94
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.69 0.46 11.3 1.03 1.48 1.37 -0.805 -1.05 0.578 20.4 22.3 10 -- --
98.77 0.463 11.3 1.03 1.51 1.32 -1.65 -- 0.578 20.5 22.47 10 -- --
97.15 0.459 11.3 1.03 1.43 1.45 -- -1.37 0.55 20.3 22.11 10 -- --
107.77 0.483 11.3 1.07 1.54 1.29 -- -- 0.577 20.6 21.94 10 -- --
166.65 0.601 11.3 1.1 -- 1.99 -- -1.11 0.564 -- 11.61 6 -- --
130.57 0.536 11.4 0.985 2.54 -- -1.31 -- 0.554 22.1 -- -- -- --
137.35 0.549 11.3 1.04 2.55 -- -- -- 0.557 22.1 -- -- -- --
177.12 0.62 11.3 1 -- 1.93 -- -- 0.572 -- 10.57 6 -- --
138.21 0.548 11.3 -- 1.58 1.27 -- -- 0.514 20.6 22.84 23 -- --
529.74 1.08 11.3 1.07 -- -- -- -- 0.561 -- -- -- -- --
165.63 0.602 11.4 -- 2.55 -- -- -- 0.441 22.2 -- -- -- --
198.88 0.657 11.3 -- -- 1.96 -- -- 0.459 -- 10 2 -- --
560 1.1 11.3 -- -- -- -- -- 0.442 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 87.00 radiation 20 10 < th dose dependent rect. 9 11
3 88.00 radiation 1 90 < th dose independent rect. 9 10
16 89.26 humidity 70 10 > th dose independent rect. 2 18
19 89.61 humidity 70 10 > th dose independent rect. 12 8
28 90.12 humidity 60 10 > th dose dependent rect. 13 7
32 90.35 humidity 50 10 > th dose dependent rect. 15 5
36 90.56 radiation 10 10 < th dose dependent sin 22 NA
38 90.65 humidity 50 90 > th dose dependent rect. 15 4
50 91.06 temperature 30 270 < th dose independent rect. 15 2
57 91.50 temperature 30 270 < th dose independent rect. 13 5
66 91.72 radiation 1 10 < th dose independent sin 23 NA
70 91.81 humidity 70 90 > th dose independent rect. 13 6
99 92.77 temperature 30 10 < th dose dependent rect. 12 8
128 93.59 radiation 1 10 > th dose independent sin 23 NA
163 94.24 temperature 30 90 < th dose dependent rect. 13 6
167 94.44 humidity 50 270 > th dose dependent rect. 15 2
174 94.50 temperature 30 90 < th dose dependent rect. 15 4
191 94.72 humidity 60 270 > th dose independent rect. 15 2
200 94.84 radiation 40 270 < th dose dependent rect. 15 2
202 94.88 humidity 70 10 > th dose independent rect. 9 11
216 95.14 radiation 20 30 < th dose independent rect. 9 11
241 95.50 radiation 30 10 < th dose dependent rect. 2 18
248 95.72 radiation 1 10 < th dose independent rect. 7 13
265 95.89 radiation 10 10 > th dose independent sin 20 NA
267 95.92 radiation 20 270 < th dose dependent rect. 22 21
270 95.95 radiation 20 10 < th dose dependent rect. 15 23
276 96.00 radiation 1 10 < th dose independent rect. 11 9
280 96.01 radiation 20 10 < th dose dependent rect. 13 23
295 96.19 radiation 20 10 < th dose dependent no NA NA
296 96.20 radiation 20 10 < th dose dependent rect. 11 23
324 96.51 humidity 60 10 > th dose dependent rect. 8 12
333 96.64 radiation 1 10 < th dose independent rect. 13 7
340 96.72 radiation 30 270 < th dose dependent rect. 23 19
381 97.27 radiation 20 270 < th dose independent rect. 15 2
394 97.37 radiation 20 10 < th dose dependent rect. 9 23
402 97.45 humidity 60 10 > th dose dependent rect. 2 18
426 97.57 humidity 50 270 > th dose dependent rect. 23 20
456 97.74 temperature 30 270 < th dose independent rect. 24 18
485 97.91 temperature 30 270 < th dose independent rect. 23 20
529 98.17 radiation 30 270 < th dose independent rect. 13 5
531 98.18 humidity 50 90 > th dose dependent rect. 1 19
541 98.27 humidity 60 10 > th dose dependent rect. 24 20
578 98.49 temperature 10 270 > th dose dependent rect. 8 15
597 98.63 radiation 1 10 < th dose independent rect. 15 5
650 98.95 radiation 20 30 < th dose independent rect. 2 18
741 99.46 temperature 25 10 < th dose independent rect. 12 8
775 99.67 temperature 30 10 < th dose dependent rect. 2 18
777 99.68 atmosphere 1000 30 > th dose dependent rect. 15 5
861 100.13 radiation 20 10 < th dose dependent rect. 7 23
874 100.17 temperature 30 270 < th dose dependent rect. 15 2
883 100.22 radiation 10 90 > th dose independent rect. 9 22
890 100.25 radiation 20 270 < th dose independent rect. 23 19
917 100.37 radiation 20 10 < th dose dependent rect. 23 23
926 100.43 radiation 10 90 > th dose independent rect. 9 9
976 100.55 humidity 70 10 > th dose independent sin 22 NA