BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0796400 Os02g0796400|Os02g0796400
(517 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0796400 Protein prenyltransferase domain containing pr... 906 0.0
AK099985 248 5e-66
Os04g0544400 Tetratricopeptide-like helical domain containi... 221 1e-57
Os10g0501300 Protein prenyltransferase domain containing pr... 202 7e-52
Os07g0598500 Protein prenyltransferase domain containing pr... 191 8e-49
Os01g0301000 Protein prenyltransferase domain containing pr... 190 3e-48
Os04g0320200 UDP-glucuronosyl/UDP-glucosyltransferase famil... 181 2e-45
Os01g0301700 Protein prenyltransferase domain containing pr... 174 1e-43
Os12g0531500 Pentatricopeptide repeat containing protein 134 2e-31
Os01g0301500 Protein prenyltransferase domain containing pr... 129 5e-30
Os04g0450200 Pentatricopeptide repeat containing protein 121 1e-27
Os12g0527850 Protein prenyltransferase domain containing pr... 121 1e-27
Os01g0280400 Tetratricopeptide-like helical domain containi... 110 3e-24
Os12g0170100 Similar to DNA-binding protein 107 3e-23
Os07g0222700 Protein prenyltransferase domain containing pr... 93 4e-19
Os10g0501000 Tetratricopeptide-like helical domain containi... 93 4e-19
Os07g0513200 Protein prenyltransferase domain containing pr... 68 2e-11
>Os02g0796400 Protein prenyltransferase domain containing protein
Length = 517
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/480 (91%), Positives = 440/480 (91%)
Query: 38 TAREDGDGGDLLSRCLLRIPRKSXXXXXXXXXXXXXXXXXXXSPPEXXXXXXXXXXXXXY 97
TAREDGDGGDLLSRCLLRIPRKS SPPE Y
Sbjct: 38 TAREDGDGGDLLSRCLLRIPRKSGRAAAAAAVERWARERGRVSPPELRRDVVRLRRARRY 97
Query: 98 EQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPLL 157
EQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLST FPLL
Sbjct: 98 EQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTAASKKAASFPLL 157
Query: 158 HCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIP 217
HCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIP
Sbjct: 158 HCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIP 217
Query: 218 RNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALA 277
RNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALA
Sbjct: 218 RNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALA 277
Query: 278 CLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLI 337
CLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLI
Sbjct: 278 CLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLI 337
Query: 338 KVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYK 397
KVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYK
Sbjct: 338 KVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYK 397
Query: 398 TWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADRF 457
TWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADRF
Sbjct: 398 TWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADRF 457
Query: 458 IKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLIIRASKIDIT 517
IKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLIIRASKIDIT
Sbjct: 458 IKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLIIRASKIDIT 517
>AK099985
Length = 514
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 223/420 (53%), Gaps = 4/420 (0%)
Query: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPL 156
++ ALEI WM + + RL P DH V LDL+AKV G AE+++ + L
Sbjct: 91 FKHALEICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNAL 150
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
LH YV KAE + E+ + G FN +M LY+++ + EKV +I ++R I
Sbjct: 151 LHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI 210
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
P ++++YNIW+ C++ + + + + + +++ D+ V W T+ L +I+ G K
Sbjct: 211 P-DLVTYNIWLTYCSKKNSVKAAEKVY-DLMKDERVVPDWMTFSLLGSIYINAGLHVKGR 268
Query: 277 ACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCL 336
L E + S R YS ++T YA+L+DR + R+W + + Y + L
Sbjct: 269 DALVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSL 328
Query: 337 IKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNY 396
+ GDI AE + WE+ S D R+ N +L Y++NG +EKAE H+++KG P+Y
Sbjct: 329 TRFGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSY 388
Query: 397 KTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADR 456
TWE+ + G++ +MDK + +KK LS L+ W P +L AI EE+G +E A++
Sbjct: 389 STWELFVWGYLSDGRMDKVLECLKKALSCLE--KWDPNPQLATAIYSQIEEKGDIEAAEK 446
Query: 457 FIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLIIRASKIDI 516
+ + ++ + +Y S+L Y A+++P + + + D++ MD+E L+ SK I
Sbjct: 447 LLVMFREAGYVTTEIYNSVLRTYAKAELMPLIVDERMDQDKVSMDDETRSLLRLTSKYPI 506
>Os04g0544400 Tetratricopeptide-like helical domain containing protein
Length = 571
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 193/367 (52%), Gaps = 1/367 (0%)
Query: 97 YEQALEILSWMDSHND-FRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFP 155
+ AL++ WM D F LS SD ++LDLIAKV G S AEEY+ +L
Sbjct: 123 FNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGS 182
Query: 156 LLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNN 215
LL+ Y +K E+ ++++ G D FN +M YV + EKV +I M N
Sbjct: 183 LLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERN 242
Query: 216 IPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA 275
+ +V +YNIW+ +CA + +++ F +M+ D+ V W+TY TLA++ K G S KA
Sbjct: 243 VAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKA 302
Query: 276 LACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVC 335
L+ AE + + + + ++MT Y+ L ++ V R+W K I Y +
Sbjct: 303 EESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSA 362
Query: 336 LIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPN 395
L+++GDI AE + W ++S D + N+LL Y R G++ KAE+ +EKG +P
Sbjct: 363 LVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPK 422
Query: 396 YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDAD 455
TWEIL +++ Q +A++ ++K ++ WRP +E++ F+E+ E AD
Sbjct: 423 PNTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESAD 482
Query: 456 RFIKVLQ 462
R + VL+
Sbjct: 483 RLMNVLR 489
>Os10g0501300 Protein prenyltransferase domain containing protein
Length = 513
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 213/432 (49%), Gaps = 7/432 (1%)
Query: 80 SPPEXXXXXXXXXXXXXYEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEY 139
S PE + QALE+ WM LSP D RL+LI+KVHG +A EY
Sbjct: 81 SKPELQSLVKYLRRRCRFSQALELSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEY 140
Query: 140 YRKLSTXXXXXXXXFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATC 199
+ + LL CY V+KAE ++ G+ + +++N +M LY
Sbjct: 141 FDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMGM-ANSYAYNAMMNLYSQIG 199
Query: 200 QYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTY 259
Q E+V S+ M+ I ++ + + ++A A+V + +++ ++ ++++ W ++
Sbjct: 200 QVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKASCNNLM--SWHSF 257
Query: 260 CTLANIFKKYGQSSKALACLRTAETKLSS--TGRLGYSFIMTCYAALNDRDGVIRLWEAS 317
+ +F K G +AL + +E ++++ GR+ Y F++T YA L V R+W+
Sbjct: 258 AIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVY 317
Query: 318 KI-VPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGW 376
+ VP YM + L+K+ DI AE + WE++ HD R+ N+LL AY + G
Sbjct: 318 RSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGL 377
Query: 377 IEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLE 436
+EKAE L ++KG TW L G+ + Q+ KA + KK L+ + W+P L
Sbjct: 378 MEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAADLTKKALA-SASNEWKPDLA 436
Query: 437 LLEAIAKYFEEQGSVEDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGD 496
+ YF EQ +VE A+ +LQ+ + +Y LL Y+NA ++ + D
Sbjct: 437 NVLMSINYFAEQKNVEAAEEMASLLQRLVPLTRDVYHGLLKTYVNAGEPASDLLDRMKKD 496
Query: 497 QIDMDEEMDQLI 508
I+ DEE D+++
Sbjct: 497 GIEADEETDKIL 508
>Os07g0598500 Protein prenyltransferase domain containing protein
Length = 506
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 1/367 (0%)
Query: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPL 156
+ QALE+ WM++ + P DH V LDLI ++HG+S AE Y+ L L
Sbjct: 112 HRQALEVSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGAL 171
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
L+CY E V+K+ +++ G +N IM LY Q+EKV SVI MK N I
Sbjct: 172 LNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGI 231
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
+ SY I +N+ + +++ +EM + + V W+TY +A+ + K KA
Sbjct: 232 VPDNFSYRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAF 291
Query: 277 ACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCL 336
+ L+ AE K++ Y+ +++ Y L D+ V RLW R +Y + + L
Sbjct: 292 SALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVL 351
Query: 337 IKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNY 396
+K+ +I AE WE+ D +V NVLL Y + ++KAE L L+KG P
Sbjct: 352 VKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPS 411
Query: 397 KTWEILMEGFVQSKQMDKAVNAMKKGLSLL-KTCHWRPPLELLEAIAKYFEEQGSVEDAD 455
+W I+ G+ + KA K L + W P ++E I KY ++G VE+ +
Sbjct: 412 TSWAIVAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVE 471
Query: 456 RFIKVLQ 462
F+ +L+
Sbjct: 472 IFVDLLK 478
>Os01g0301000 Protein prenyltransferase domain containing protein
Length = 522
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 212/415 (51%), Gaps = 3/415 (0%)
Query: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPL 156
+ ALE++ WM + +S ++H +RLDLI KV G AE+Y+ L L
Sbjct: 104 HAHALELMEWMVNTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGAL 163
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
L+CY + + KA ++ G+ N +M LYV Q+ KV S+ MK N+
Sbjct: 164 LNCYCSAKMEDKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNV 223
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
+ L+ + M++ A ++ + +V KEM + V +GWS Y TLA+++ +A
Sbjct: 224 KPDNLTCCLLMSSYAALNKIDTVGEVLKEM-EEKKVALGWSAYSTLASLYVNANMVEEAE 282
Query: 277 ACLRTAETKLS-STGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVC 335
+ L+ E+ + GR + F+M+ YA++ + V R+W K ++ +Y+ +
Sbjct: 283 SALKKLESLIDVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQA 342
Query: 336 LIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPN 395
L K+ D R + + WE+ + +D R++N++ A++RNG ++AE L + EKGA +
Sbjct: 343 LYKLNDDDRMKQIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFD 402
Query: 396 YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDAD 455
KT E+ +E ++ M A+N + + ++ L + E + KYFEE VE A+
Sbjct: 403 SKTCELFLEHYMGKGDMTSALNWV-ENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAE 461
Query: 456 RFIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLIIR 510
RF+ L+ Y+SLL Y+ A ++I QMI D+I++ + +L+ R
Sbjct: 462 RFLNCLRTSGCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIEICYGIGKLLKR 516
>Os04g0320200 UDP-glucuronosyl/UDP-glucosyltransferase family protein
Length = 524
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 203/434 (46%), Gaps = 46/434 (10%)
Query: 118 SDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPLLHCYVTERNVQKAETFMAELQ 177
SD +RLDL+AK G + AE+Y+ L LL+CY + +KAE M +++
Sbjct: 87 SDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMK 146
Query: 178 RYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLA 237
+N +M LY Q+EKV SVI MK +++ ++ +YN+WM A A +
Sbjct: 147 ELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIK 206
Query: 238 SVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFI 297
V+ +EM D V W+TY LA+I+ G KA A L+ E +S Y F+
Sbjct: 207 GVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTSNDLEAYQFL 266
Query: 298 MTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAE-- 355
+T YA + V R+W + K R +Y++ + L + D+ AE F WEA+
Sbjct: 267 ITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFKEWEAQYI 326
Query: 356 -----------------------------------SKKHDVRVSNVLLGAYVRNGWIEKA 380
K+D+RV+N ++ AY+ G +KA
Sbjct: 327 NPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKAYITEGMFDKA 386
Query: 381 ERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDK----AVNAMKKGLSLLKTCHWRPPLE 436
+ +G N KTWEI ME +++ + A A+KKG S + W PP E
Sbjct: 387 VAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGHSAGRI--WVPPHE 444
Query: 437 LLEAIAKYFEEQGSVEDADRFIKVLQKF--NLTSLPLYKSLLGAYINADIVPQNIPQMIA 494
+ E + YFE+ V+ A++F++VL+K +L ++ +++ L+ Y A + +
Sbjct: 445 VTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTV-VFEPLVRTYAAAGKKLPGMRHRLK 503
Query: 495 GDQIDMDEEMDQLI 508
+ +++ EE +L+
Sbjct: 504 IENVEVSEETAKLL 517
>Os01g0301700 Protein prenyltransferase domain containing protein
Length = 504
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 200/407 (49%), Gaps = 5/407 (1%)
Query: 98 EQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPLL 157
+ AL+++ WM++ L H +RLDL++K++G AEEY+ L LL
Sbjct: 89 KHALQLMDWMEARG-VNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLL 147
Query: 158 HCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIP 217
+CY R +K ++ + D +N +M LY+ T Q EK+ + + M+ + I
Sbjct: 148 NCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQ 207
Query: 218 RNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALA 277
N SY + + ++ + S + KE+ ++ V WS Y TLAN + K Q KA
Sbjct: 208 PNKFSYFVLTESYIMMNDIESAEKVLKEL--QEVNSVPWSLYATLANGYNKLQQFDKAEF 265
Query: 278 CLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLI 337
L+ AE L + +++ YA + V R+WE+ K + +Y+ + L
Sbjct: 266 TLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALK 325
Query: 338 KVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYK 397
K+ D + F WE+ + +D+++ N+++ AY+ G ++KAE + + + H NY+
Sbjct: 326 KLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQD-HSNYR 384
Query: 398 TWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADRF 457
T+ I E +++ +M++A+ K ++K W P +L+ K+FE+ V+ + F
Sbjct: 385 TFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVPE-KLVNRYLKHFEDSKDVDGMETF 443
Query: 458 IKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEM 504
+ L+ Y++L+ YI+ +IPQ + D++D+ EM
Sbjct: 444 CECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEM 490
>Os12g0531500 Pentatricopeptide repeat containing protein
Length = 352
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 2/229 (0%)
Query: 288 STGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEW 347
+ G G + +L+DR + R+W + + Y + L + GDI AE
Sbjct: 118 AKGNHGEKNVDVQSTSLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAES 177
Query: 348 TFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFV 407
+ WE+ S D R+ N +L Y++NG +EKAE H+++KG P+Y TWE+ + G++
Sbjct: 178 FYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYL 237
Query: 408 QSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQKFNLT 467
+MDK + +KK LS L+ W P +L AI EE+G +E A++ + + ++
Sbjct: 238 SDGRMDKVLECLKKALSCLE--KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYV 295
Query: 468 SLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLIIRASKIDI 516
+ +Y S+L Y A+++P + + + D++ MD+E L+ SK I
Sbjct: 296 TTEIYNSVLRTYAKAELMPLIVDERMDQDKVSMDDETRSLLRLTSKYPI 344
>Os01g0301500 Protein prenyltransferase domain containing protein
Length = 484
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 173/360 (48%), Gaps = 7/360 (1%)
Query: 99 QALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLS--TXXXXXXXXFPL 156
ALE++ WM + ++ + + + L+L+ V+G AEEY+ + T L
Sbjct: 98 HALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGAL 157
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
L+CY + + +KA + G+P N +M LY+ Q+ KV ++ MK N+
Sbjct: 158 LNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNV 217
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA- 275
+ L+ I M + A + + +V+ F M D V WS + TL +I+ G +A
Sbjct: 218 QPDELTCCILMRSHAAHNKIDTVKETFYNMSLLD-VPKQWSIFRTLGSIYMNAGMVEEAE 276
Query: 276 LACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPG-RIPAANYMSAMV 334
LA +R E GR + F+M +A++ + GV R+W+ K+ +Y+ +
Sbjct: 277 LAFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQ 336
Query: 335 CLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
CL K+GD R + + WE + +D R++N+L A++RNG +AE L + E+G
Sbjct: 337 CLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDF 396
Query: 395 NYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDA 454
+++T E+ E ++ A+ +K L K + E + + K+FEE VE A
Sbjct: 397 DFETCELFREHYLGKGDTTSALKWAEKMTKLPKK-QGKQDQETCKFL-KWFEEDKVVEGA 454
>Os04g0450200 Pentatricopeptide repeat containing protein
Length = 292
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 1/277 (0%)
Query: 115 LSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPLLHCYVTERNVQKAETFMA 174
LS +D+ +R+DLI +V G + AE+++ KL LLH Y + KAE
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 175 ELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVS 234
++ L ++ +NE+M LY++ + +KV + +KR ++ +YN+ ++A A
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 235 GLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGY 294
L + EM D GW Y LA I+ GQ + L AE K+S + Y
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITY 183
Query: 295 SFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWE- 353
F++ + L +RD + +W++ + R+ + NY+ + + G + A W+
Sbjct: 184 DFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQR 243
Query: 354 AESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEK 390
+++ + D+ N L A++ G+ + A ML+K
Sbjct: 244 SKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQK 280
>Os12g0527850 Protein prenyltransferase domain containing protein
Length = 313
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPL 156
++ ALEI WM + + RL P DH V LDL+AKV G AE+++ + L
Sbjct: 76 FKHALEICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNAL 135
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
LH YV KAE + E+ + G FN +M LY+++ + EKV +I ++R I
Sbjct: 136 LHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI 195
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
P ++++YNIW+ C++ + + + + + +++ D+ V W T+ L +I+ G K
Sbjct: 196 P-DLVTYNIWLTYCSKKNSVKAAEKVY-DLMKDERVVPDWMTFSLLGSIYINAGLHVKGR 253
Query: 277 ACLRTAETKLSSTGRLGYSFIMTCYAAL 304
L E + S R YS ++T YA+L
Sbjct: 254 DALVEMEKRASRKERAAYSSLLTLYASL 281
>Os01g0280400 Tetratricopeptide-like helical domain containing protein
Length = 426
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 175/399 (43%), Gaps = 9/399 (2%)
Query: 101 LEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPLLHCY 160
L++L +++ F L D+ R+DL+AKVHG +AE+Y + LL
Sbjct: 9 LQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANC 68
Query: 161 VTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNV 220
V NV+K E +++ G PV S N+++ LY +K+ V+ +M++ N+ ++
Sbjct: 69 VAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLY-KRVDKKKLGDVLTMMEKENVKPSL 127
Query: 221 LSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLR 280
+Y + ++ + ++ + M D +E T+A + G KA A L
Sbjct: 128 FTYKLLVDTKGAARDIEDMEKVIQAM-QADGIEPDLLIQATIARHYIFGGYREKAEAILE 186
Query: 281 TAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVG 340
E + R F++ YA L + V R+W+ + V R+ MSA+ K+G
Sbjct: 187 QIEGDDINENRSACKFVLPLYAFLGKKADVERIWKVCE-VNARLDEC--MSAIEAFGKLG 243
Query: 341 DIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWE 400
D+ +AE F + K N +L Y +K + L M + G T +
Sbjct: 244 DVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLD 303
Query: 401 ILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADR-FIK 459
L++ + + +++KA + + K L +P + + ++G V +A++ F K
Sbjct: 304 SLVKLYSDAGEVEKADSILHK---LSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSK 360
Query: 460 VLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQI 498
V Q + Y+ LL AY+NA P + + D I
Sbjct: 361 VRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDI 399
>Os12g0170100 Similar to DNA-binding protein
Length = 611
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 176/407 (43%), Gaps = 17/407 (4%)
Query: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPL 156
Y +AL++L +++ L D+ R+DL+AK H +AE+Y + L
Sbjct: 190 YIKALQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTL 249
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
L V NV+KAE +++ G PV S N+++ LY +K+ V+ +M++ N+
Sbjct: 250 LANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLY-KRVDKKKLGDVLTMMEKENV 308
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
++ +Y + ++ + ++ + M D +E T+A + G K+
Sbjct: 309 KPSLFTYKLLVDTKGAARDIEDMEKVIQAM-QADGIEPDLLFQATIARHYIFGGYREKSE 367
Query: 277 ACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCL 336
A L + R F++ YA L D V R+W K+ MSA+
Sbjct: 368 AILEQMVGDDINENRSACKFVLPLYAFLGKNDDVERIW---KVCEANARLDECMSAIEAF 424
Query: 337 IKVGDIGRAEWTFG----SWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGA 392
K+GD+ +AE F +W+ S K+ N +L Y +K + L M + G
Sbjct: 425 GKLGDVEKAEEIFDNMFKTWKTLSSKY----YNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 393 HPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVE 452
T + L++ + + +++KA + + K L +P + + ++G V
Sbjct: 481 RLGPYTLDSLVKLYSDAGEVEKADSILHK---LSYKNKIKPMYTTYLMLLDSYSKKGDVH 537
Query: 453 DADR-FIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQI 498
+A++ F KV Q + Y+ LL AY+NA P + + D I
Sbjct: 538 NAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDI 584
>Os07g0222700 Protein prenyltransferase domain containing protein
Length = 411
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 162/347 (46%), Gaps = 14/347 (4%)
Query: 156 LLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNN 215
+++C V ++QKAE E++ L + N+++ LY KV SV+ LM++ N
Sbjct: 53 IVNC-VLAGDIQKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKEN 110
Query: 216 IPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA 275
+ + +Y + ++ + LA ++ EM +E ST +A + G + KA
Sbjct: 111 VKPSAFTYRLLIDLKGRSNDLAGIEVVLNEM-KAYGIEPSTSTQTMVARFYIHGGLTEKA 169
Query: 276 LACLRTAETKLSST--GRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAM 333
A ++ E +LS++ GR ++ YAALN + V R+WE +++SA+
Sbjct: 170 EAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCT----EPMLEDFLSAI 225
Query: 334 VCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAH 393
++G I +AE TF + +K + N +L Y +N + K ++ M G
Sbjct: 226 KAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCP 285
Query: 394 PNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPL-ELLEAIAKYFEEQGSVE 452
TW+ L+ +V S +++KA + + L++ + R PL + K + ++G +
Sbjct: 286 NGPLTWDALINLYVNSGEVEKADSFL---LNVAEENPDRKPLFTSYFFLMKGYAKRGDIH 342
Query: 453 DADRFIKVLQKFNLTSLPL-YKSLLGAYINADIVPQNIPQMIAGDQI 498
+ ++ L+ PL Y LL AY+NA + + + GD +
Sbjct: 343 NTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAKVPAHGFLERMRGDNV 389
>Os10g0501000 Tetratricopeptide-like helical domain containing protein
Length = 451
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 165/412 (40%), Gaps = 68/412 (16%)
Query: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTXXXXXXXXFPL 156
+ QAL++ WM LSP D RL+LI KV
Sbjct: 103 FSQALQLSMWMTERLHLHLSPGDVANRLELITKV-------------------------- 136
Query: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
Y +R V+ ++ +L++ + ++K Y EK + M+ +
Sbjct: 137 ---YGLDRAVEYFDSMPDQLKQ------QQCYGSLLKCYAEANCVEKAEELFEKMRGMGM 187
Query: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
+ +YN+ M + + V S + M +V +T+ +A + KK
Sbjct: 188 ASS-YAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKK-------- 238
Query: 277 ACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCL 336
++ Y D + + E + + YM + L
Sbjct: 239 ------------------KTLVAAYVVAEDIKAIENVLEKANSCN-----SMYMCRIGVL 275
Query: 337 IKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNY 396
+K+ D+ AE + WE++ HD R+ N+L+ AY + G ++KAE L ++KG P
Sbjct: 276 LKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFA 335
Query: 397 KTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSVEDADR 456
T L G+ + Q+ KA + KK L+ W P L + YF EQ +VE A+
Sbjct: 336 NTCYKLAGGYFKVGQVSKAADLTKKALASASN-EWIPDLTNVLMSLNYFAEQKNVEAAEE 394
Query: 457 FIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
+ +LQ+ + +Y LL Y+NA ++ + D ++ DEE ++++
Sbjct: 395 MMSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEETEKIL 446
>Os07g0513200 Protein prenyltransferase domain containing protein
Length = 754
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 18/331 (5%)
Query: 156 LLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNN 215
++H Y T ++ A ++E+ GL ++P ++ ++ L Q + V+ M +
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 216 IPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKA 275
+ + + M+ LA+ ++ F EM + G TY L N + G+ +A
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGV-TYTALINGLCRAGELKEA 409
Query: 276 LACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEA----SKIVPGRIP--AANY 329
L+ E K + Y+ ++ Y V ++ EA +K+V R+ Y
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCK------VGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 330 MSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLE 389
+ L K GD+ A ++ + ++ N L+ + G +E+A R + M E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 390 KGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQG 449
G P+ T+ ++ QSK++D+A + +++ L +P + + F G
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK----GIKPTIVTYNVLMNGFCMSG 579
Query: 450 SVEDADRFIK-VLQKFNLTSLPLYKSLLGAY 479
VE R ++ +L+K + Y SL+ Y
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,287,650
Number of extensions: 507323
Number of successful extensions: 2804
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 2827
Number of HSP's successfully gapped: 19
Length of query: 517
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 412
Effective length of database: 11,553,331
Effective search space: 4759972372
Effective search space used: 4759972372
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)