BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0709800 Os02g0709800|AK068743
(679 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0709800 RabGAP/TBC domain containing protein 1322 0.0
Os02g0810500 RabGAP/TBC domain containing protein 154 2e-37
Os07g0525400 RabGAP/TBC domain containing protein 130 5e-30
Os08g0547200 RabGAP/TBC domain containing protein 124 2e-28
Os09g0528800 RabGAP/TBC domain containing protein 124 3e-28
Os10g0518100 RabGAP/TBC domain containing protein 122 1e-27
Os01g0908100 RabGAP/TBC domain containing protein 92 2e-18
Os11g0479300 RabGAP/TBC domain containing protein 81 3e-15
Os11g0587500 RabGAP/TBC domain containing protein 80 6e-15
Os08g0337700 RabGAP/TBC domain containing protein 77 3e-14
Os09g0515800 RabGAP/TBC domain containing protein 75 2e-13
Os04g0377600 Similar to TBC1 domain family member 13 74 4e-13
>Os02g0709800 RabGAP/TBC domain containing protein
Length = 679
Score = 1322 bits (3421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/679 (94%), Positives = 642/679 (94%)
Query: 1 MRRXXXXXXXXXXXXGTPRXXXXXXXXXXXXXXXXXXXXXXXXXMRSDLVDQGSGETAKV 60
MRR GTPR MRSDLVDQGSGETAKV
Sbjct: 1 MRREEASAAAAAAEAGTPRSPDLHDLSDDSDYAAAAAASSSHSAMRSDLVDQGSGETAKV 60
Query: 61 DVVYEKERVTIHPTQYGSGRISGKLRLYLQQGSLFLSWEPNEGVDSLSSNSATMEIEKYR 120
DVVYEKERVTIHPTQYGSGRISGKLRLYLQQGSLFLSWEPNEGVDSLSSNSATMEIEKYR
Sbjct: 61 DVVYEKERVTIHPTQYGSGRISGKLRLYLQQGSLFLSWEPNEGVDSLSSNSATMEIEKYR 120
Query: 121 NLYTIKALPLSDVRFIRKHTPTFGFEYIIIVLSSGLAFPPFYFYNGGLRELFATLKKHVF 180
NLYTIKALPLSDVRFIRKHTPTFGFEYIIIVLSSGLAFPPFYFYNGGLRELFATLKKHVF
Sbjct: 121 NLYTIKALPLSDVRFIRKHTPTFGFEYIIIVLSSGLAFPPFYFYNGGLRELFATLKKHVF 180
Query: 181 IIRSDDDPNVFLVNDFQDPLQKSLSSLELPGVATVANAMSRQNSLSFTSSVDEARHGSDA 240
IIRSDDDPNVFLVNDFQDPLQKSLSSLELPGVATVANAMSRQNSLSFTSSVDEARHGSDA
Sbjct: 181 IIRSDDDPNVFLVNDFQDPLQKSLSSLELPGVATVANAMSRQNSLSFTSSVDEARHGSDA 240
Query: 241 KHGASSSMTEYVSKQKHRSNDPGRDLSIQVLEKFSLVTKFARDTTSSLFRENHSSGGHTY 300
KHGASSSMTEYVSKQKHRSNDPGRDLSIQVLEKFSLVTKFARDTTSSLFRENHSSGGHTY
Sbjct: 241 KHGASSSMTEYVSKQKHRSNDPGRDLSIQVLEKFSLVTKFARDTTSSLFRENHSSGGHTY 300
Query: 301 GRQQQEYVLDNRANDKYKDQQITPDKDSLLSDSMESNKILAWGKPREQPLSVDEWRSFLD 360
GRQQQEYVLDNRANDKYKDQQITPDKDSLLSDSMESNKILAWGKPREQPLSVDEWRSFLD
Sbjct: 301 GRQQQEYVLDNRANDKYKDQQITPDKDSLLSDSMESNKILAWGKPREQPLSVDEWRSFLD 360
Query: 361 PEGRVMDSKALRKKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIK 420
PEGRVMDSKALRKKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIK
Sbjct: 361 PEGRVMDSKALRKKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIK 420
Query: 421 SQWKSISSTQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYN 480
SQWKSISSTQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYN
Sbjct: 421 SQWKSISSTQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYN 480
Query: 481 FDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQLLALSKLVE 540
FDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQLLALSKLVE
Sbjct: 481 FDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQLLALSKLVE 540
Query: 541 LLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCV 600
LLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCV
Sbjct: 541 LLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCV 600
Query: 601 AILKRYRSRIIGEQMDFDTLLKFINELSGEINLDRAIQDAEALCDQAGPNGAACIPPGTP 660
AILKRYRSRIIGEQMDFDTLLKFINELSGEINLDRAIQDAEALCDQAGPNGAACIPPGTP
Sbjct: 601 AILKRYRSRIIGEQMDFDTLLKFINELSGEINLDRAIQDAEALCDQAGPNGAACIPPGTP 660
Query: 661 PSMPIETDGGLYVQEDEVM 679
PSMPIETDGGLYVQEDEVM
Sbjct: 661 PSMPIETDGGLYVQEDEVM 679
>Os02g0810500 RabGAP/TBC domain containing protein
Length = 427
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 43/311 (13%)
Query: 317 YKDQQITPDKDSLLSDSMESNKILAWGKPREQP---LSVDEWRSFLDPEGRVMDSKALRK 373
Y D + D D++ E + A + + +P LS W+ + EG V+D + K
Sbjct: 11 YNDPDMLIDPDTVYPIRPECREDAAKTRFKPRPGLTLSPRRWKLLHNEEG-VLDIAGMIK 69
Query: 374 KVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIKSQWKSISST---- 429
+V GG ++ EVW+FLLG ++ S ++ L +R EYE +K++ + + +
Sbjct: 70 RVQRGGTHPNIKGEVWEFLLGCYDPKSNTEQKSQLRQQRRLEYEKLKTKCREMDTAVGSG 129
Query: 430 -------------------------QA------KRFTKFRERKGLIDKDVVRTDRSVPYY 458
QA K +++ I DV RTDR + YY
Sbjct: 130 RVITMPVITEDGQPIQDPNSVDAEQQASDTPLPKEVIQWKLTLHQIGLDVNRTDRQLVYY 189
Query: 459 EGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLG 518
E +N+ L DIL YS+ + D+GYCQGMSD +P+ ++E E+++FWCF LM R+
Sbjct: 190 ES--QENLARLWDILAVYSWVDKDIGYCQGMSDLCSPMSILLEHEADAFWCFERLMRRVR 247
Query: 519 ANFNRDQN--GMHAQLLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFD 576
NF G+ +QL LS +++ +DP+LH + D Y F FR +++ F+REFSF
Sbjct: 248 GNFVSSSTSIGVRSQLTILSSVMKAVDPKLHEHLENLDGGEYLFAFRMLMVLFRREFSFV 307
Query: 577 QIMLLWEVLWT 587
M LWE++W+
Sbjct: 308 DTMYLWELMWS 318
>Os07g0525400 RabGAP/TBC domain containing protein
Length = 451
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 55/250 (22%)
Query: 444 IDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMEDE 503
I DV+RTDR++ +YE + +N+ L DIL Y++ + D+GYCQGMSD +P++ +++DE
Sbjct: 188 IGLDVLRTDRTMVFYE--NKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLKDE 245
Query: 504 SESFWCFAILMERLGANFN-RDQN-GMHAQLLALSKLVELLDPQLHNYFRKNDCLNYFFC 561
+++FWCF LM RL NF DQ+ G+ QL L+ ++++LDP+LH++ +Y F
Sbjct: 246 ADAFWCFEKLMRRLRGNFKCTDQSVGVANQLQYLASIIQVLDPKLHDHLEILGGGDYLFA 305
Query: 562 FRWVLIQFKREFSFDQIMLLWEVLWT-------------------------------HY- 589
FR ++ F+RE SF + LWE++W H+
Sbjct: 306 FRMFMVLFRREVSFGDSLYLWEMMWALEYDPDIFFAACEDASAHKSKVSKSKLRGVRHFG 365
Query: 590 -WSEH------------------FHLYLCVAILKRYRSRIIGEQMDFDTLLKFINELSGE 630
W + +++ ++LK R +++ E D L++ +N+++G
Sbjct: 366 KWDKDKDKENSKNGSEDTDGPVPISVFMVASVLKEKREKLLQEARGLDDLIRILNDVNGN 425
Query: 631 INLDRAIQDA 640
++ +A A
Sbjct: 426 LDAKKACAGA 435
>Os08g0547200 RabGAP/TBC domain containing protein
Length = 565
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 472 ILLTYSFYNFDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQ 531
+L Y+ ++ ++GYCQGMSD L+PI+ VME++ E+FWCF M + NF D+ G+ Q
Sbjct: 366 VLEAYALFDPEIGYCQGMSDLLSPIIVVMEEDHEAFWCFVGFMRKARHNFRLDEVGIRRQ 425
Query: 532 LLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWT---- 587
L +S++++ D L+ + +K + FF +R V++ F+RE +F+Q + LWEV+W
Sbjct: 426 LKIVSQIIKRKDSHLYRHLQKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAA 485
Query: 588 -------HYWSE-HFH--------LYLCVAILKRYRSRIIGEQMDFDTLLKFINELSGEI 631
WS+ H LY A + + R II D +L+ N ++G++
Sbjct: 486 IRAGIGRSTWSKIRLHAPPTDDLLLYAIAACVLQKRKLIIERYSSMDEILRECNSMAGQL 545
Query: 632 NLDRAIQDAEAL 643
++ R + DA L
Sbjct: 546 DVWRLLDDAHDL 557
>Os09g0528800 RabGAP/TBC domain containing protein
Length = 579
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 35/272 (12%)
Query: 398 YDSTYAEREYLAVMKRTEYEAIK--SQWKSISSTQAK----RFTKFRERKGLIDKDVVRT 451
+ S+ ++ + +AI+ ++W S QA+ R + E GL D D
Sbjct: 309 FKSSKTSEDFATWQRIIRLDAIRANTEWILFSRNQAEISRERALQCAESVGLRDYD--HL 366
Query: 452 DRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMEDESESFWCFA 511
D S+ Y+ L +L Y+ Y+ ++GYCQGMSD L+PI+ VME++ E+FWCF
Sbjct: 367 DPSMIYHAAR-------LVGLLEAYAVYDPEIGYCQGMSDLLSPIIAVMEEDDEAFWCFV 419
Query: 512 ILMERLGANFNRDQNGMHAQLLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVLIQFKR 571
M + NF D+ G+ QL +S++++ D L+ + +K + FF +R V++ F+R
Sbjct: 420 GFMRKARHNFRLDEVGIRRQLKIVSQIIKRKDSHLYKHLQKLQAEDCFFVYRMVVVLFRR 479
Query: 572 EFSFDQIMLLWEVLWT-----------HYW---------SEHFHLYLCVAILKRYRSRII 611
E +F+Q + LWEV+W W ++ LY A + + R II
Sbjct: 480 ELTFEQTVCLWEVMWADQAAIRAGIGRSTWAKIRLRAPPTDDLLLYAIAACVLQRRKLII 539
Query: 612 GEQMDFDTLLKFINELSGEINLDRAIQDAEAL 643
+ D +L+ N ++G++++ R + DA L
Sbjct: 540 EKYSSMDEILRECNSMAGQLDVWRLLDDAHDL 571
>Os10g0518100 RabGAP/TBC domain containing protein
Length = 586
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 20/192 (10%)
Query: 472 ILLTYSFYNFDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQ 531
IL Y+ Y+ ++GYCQGMSD LAP+L V+ED++E+FWCFA M + NF D+ G+ Q
Sbjct: 386 ILEAYAIYDPEIGYCQGMSDLLAPLLAVLEDDNEAFWCFAGFMRKARHNFRLDEVGIRRQ 445
Query: 532 LLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYW- 590
L ++++++ D L+ + + FF +R V++ F+RE +F+Q + LWEV+W
Sbjct: 446 LNMVARIIKYKDFHLYRHLEMLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAA 505
Query: 591 -------------------SEHFHLYLCVAILKRYRSRIIGEQMDFDTLLKFINELSGEI 631
++ LY A + + R II D +++ N ++G++
Sbjct: 506 NRAGIAKSSLGKLRLGAPPTDDLLLYAIAASVLQKRKLIIESYSSMDEIIRECNSMAGQL 565
Query: 632 NLDRAIQDAEAL 643
++ + + DA L
Sbjct: 566 DIWKLLDDAHDL 577
>Os01g0908100 RabGAP/TBC domain containing protein
Length = 368
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 65/322 (20%)
Query: 364 RVMDSKALRKKVFYGGID-HVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIKSQ 422
+V+D LR G D +R VWK LLGY D E+E KR++Y A K +
Sbjct: 32 KVIDLDELRMLAAQGVPDGAAVRPTVWKLLLGYLPSDRALWEQEL--AKKRSQYAAFKEE 89
Query: 423 WKSI-----------------------------------------SSTQAKRFTKFRERK 441
+ S +T +F ++ E
Sbjct: 90 FLSNPMEIARQRELEGQGSENAGSIYNGLLHRSEVTQEEHPLSLGKTTAWNQFFEYSEII 149
Query: 442 GLIDKDVVRTDRSVPYYEGDDN---QNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILY 498
ID+DV RT + ++ GD + N L++IL+ ++ N + Y QGM++ LAP+ +
Sbjct: 150 EQIDRDVKRTHPDMHFFCGDSSFAKSNQESLKNILIIFAKLNAGIRYVQGMNEILAPLFF 209
Query: 499 VMED----------ESESFWCFAILMERLGANFNRDQN----GMHAQLLALSKLVELLDP 544
V + E++SF+CF L+ NF + + G+ L LS+LV D
Sbjct: 210 VFRNDPDDKNANFAEADSFFCFMELLSGFRDNFCQKLDNSAVGIQGTLSKLSQLVAKYDG 269
Query: 545 QLHNYFRKNDCLN-YFFCFRWVLIQFKREFSFDQIMLLWEVLWTHY-WSEHFHLYLCVAI 602
+L Y +N F+ FRW+ + +EF+F + +W+ L + + L +C A+
Sbjct: 270 ELQRYLEITTEINPQFYAFRWITLLLTQEFNFADTIHIWDTLLSDPDGPQETLLRICCAM 329
Query: 603 LKRYRSRIIGEQMDFDTLLKFI 624
L R R++ DF + LK +
Sbjct: 330 LILVRKRLLAG--DFTSNLKLL 349
>Os11g0479300 RabGAP/TBC domain containing protein
Length = 338
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 444 IDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMED- 502
ID+DV RT +P++ NQ L R +L+ +S N + Y QGM++ LAP+ YV ++
Sbjct: 122 IDRDVKRTHPEMPFFSAKANQESL--RRVLIIFSKLNPTIRYVQGMNEVLAPLFYVFKND 179
Query: 503 ---------ESESFWCFAILMERLGANFNR----DQNGMHAQLLALSKLVELLDPQLHNY 549
E+++F+CF L+ N+ + Q G+ + L LS+L++ D +L +
Sbjct: 180 PDTSNSASAEADTFFCFVELLSGFKDNYCKHLDNSQVGIRSTLSKLSQLLKRHDEELWRH 239
Query: 550 FR-KNDCLNYFFCFRWVLIQFKREFSFDQIMLLWE-VLWTHYWSEHFHLYLCVAILKRYR 607
++ FRW+ + EFSF+ + +W+ +L L +C A+L R
Sbjct: 240 MEITTKVYPQYYAFRWITLLLTMEFSFNVCIHIWDAILGDPEGPPDTLLRICCAMLILVR 299
Query: 608 SRIIG-------------EQMDFDTLLKFINELSGEI 631
R++ + D LL N L G +
Sbjct: 300 RRLLAGDFTANIQLLQHYPPTNIDHLLHIANRLRGSV 336
>Os11g0587500 RabGAP/TBC domain containing protein
Length = 279
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 444 IDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMEDE 503
I DV+RTDRS+ +YE + +N+ L DIL Y++ + ++GYCQGMSD +P++ ++ DE
Sbjct: 186 IGLDVLRTDRSMVFYE--NKENLSKLWDILAVYAWIDKEIGYCQGMSDLCSPMIVLLNDE 243
Query: 504 SESFWCFAILMERL 517
+++FWCF LM RL
Sbjct: 244 ADAFWCFERLMRRL 257
>Os08g0337700 RabGAP/TBC domain containing protein
Length = 419
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 26/258 (10%)
Query: 365 VMDSKALRKKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIKSQWK 424
V+ + +++ G+ VLR +VW + G + ST E Y +++ TE + + +
Sbjct: 124 VLTNTITLRRLIRKGVPPVLRPKVWLSVSGAAKKRSTVPETYYDELIRATEGKTTPATLQ 183
Query: 425 SISSTQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLG 484
ID D+ RT + ++ Q L R +L+ YSF + ++G
Sbjct: 184 -------------------IDHDLPRTFPCHSWLNSEEGQASL--RRVLVGYSFRDSEVG 222
Query: 485 YCQGMSDFLAPILYVMEDESESFWCFAILMERLGAN--FNRDQNGMHAQLLALSKLVELL 542
YCQG++ A +L VM+ E ++FW A+L+E + N + + +G H + L+
Sbjct: 223 YCQGLNYVAALLLLVMKTEEDAFWMLAVLLENVLVNDCYTDNLSGCHVEQRVFKDLLAKK 282
Query: 543 DPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCVAI 602
P++ + W L F + + + +W+VL+ FH+ L +
Sbjct: 283 CPRIAAHLEAMGFDVSLVATEWFLCLFSKTLPSETTLRVWDVLFNEGAKVLFHVALAIFK 342
Query: 603 LKR---YRSRIIGEQMDF 617
++ R + IG+ +D
Sbjct: 343 MREDDLLRIQHIGDVIDI 360
>Os09g0515800 RabGAP/TBC domain containing protein
Length = 444
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 38/282 (13%)
Query: 373 KKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIKSQWKSISSTQAK 432
+++ + G+ +R +W+ LLGY ++ RE + KR EY SQ+ I T+
Sbjct: 141 RELSWSGVPPYMRPNIWRLLLGYAPPNAD--RREGVLTRKRLEYVECVSQYYDIPDTE-- 196
Query: 433 RFTKFRERKGLIDKDVVRTDRSVP---YYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGM 489
+ E ++ + V R+VP +++ Q L IL T++ + GY QG+
Sbjct: 197 ---RSDEEINMLRQIAVDCPRTVPDVTFFQHPQIQKSL--ERILYTWAIRHPASGYVQGI 251
Query: 490 SDFLAPILYV--------------MED---------ESESFWCFAILMERLGANFNRDQN 526
+D L P L V ME E++ +WC + ++ + ++ Q
Sbjct: 252 NDLLTPFLVVFLSEHLEGNMDTWSMEKLSPQDVSNIEADCYWCLSKFLDGMQDHYTFAQP 311
Query: 527 GMHAQLLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEV-L 585
G+ + L +LV +D + + + F FRW RE F + LW+ L
Sbjct: 312 GIQRLVFRLKELVHRIDEPVSKHMEEQGLDFLQFAFRWFNCLMIREIPFHLVTRLWDTYL 371
Query: 586 WTHYWSEHFHLYLCVAILKRYRSRIIGEQMDFDTLLKFINEL 627
+ F +Y+ + L + ++ +++DF ++ F+ L
Sbjct: 372 AEGDYLPDFLVYISASFLLTWSDKL--KKLDFQEMVMFLQHL 411
>Os04g0377600 Similar to TBC1 domain family member 13
Length = 316
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 444 IDKDVVRTDRSVPYYEGDDN---QNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVM 500
ID+DV RT + ++ GD + N L+ IL ++ N + Y QGM++ LAP+ YV
Sbjct: 95 IDRDVKRTHPEMQFFNGDSSDALSNQESLKRILTIFAKLNPGIRYVQGMNEVLAPLYYVF 154
Query: 501 ED----------ESESFWCFAILMERLGANFNRDQN----GMHAQLLALSKLVELLDPQL 546
++ E ++F+CF L+ NF + + G+ + + LS+L++ D +L
Sbjct: 155 KNDPEENNAESAEPDAFFCFVELLSGFRDNFCKQLDNSVVGIRSTISKLSQLLKRHDEEL 214
Query: 547 HNYFRKNDCLN-YFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLY-LCVAILK 604
+ +N F+ FRW+ + +EF F + +W+ L L +C A+L
Sbjct: 215 WRHLEVVTKVNPQFYAFRWITLLLTQEFKFRDCIHIWDALLGDPEGPQATLLRICCAMLI 274
Query: 605 RYRSRIIGEQMDFDTLLKFINELSGEINLDRAIQDAEAL 643
R R++ DF LK + N+D + A L
Sbjct: 275 LVRRRLLAG--DFTANLKLLQSYP-PTNIDHLLHIANKL 310
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,406,241
Number of extensions: 934087
Number of successful extensions: 2199
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2187
Number of HSP's successfully gapped: 12
Length of query: 679
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 571
Effective length of database: 11,396,689
Effective search space: 6507509419
Effective search space used: 6507509419
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)