Os11g0479300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RabGAP/TBC domain containing protein.
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Os11g0479300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RabGAP/TBC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.3 | 0.295 | 9.25 | 0.351 | 0.823 | -0.524 | -0.588 | 1.4 | 0.17 | 9.63 | 5.048 | 10 | -- | -- |
| 41.98 | 0.302 | 9.25 | 0.365 | 0.816 | -0.555 | 0.153 | -- | 0.175 | 9.76 | 6.947 | 9 | -- | -- |
| 40.05 | 0.295 | 9.26 | 0.366 | 0.836 | -0.557 | -- | 0.977 | 0.178 | 9.68 | 6.804 | 9 | -- | -- |
| 42.02 | 0.302 | 9.25 | 0.383 | 0.835 | -0.573 | -- | -- | 0.176 | 9.74 | 6.569 | 9 | -- | -- |
| 67.28 | 0.384 | 9.27 | 0.347 | -- | 0.118 | -- | 1.19 | 0.183 | -- | 6.804 | 9 | -- | -- |
| 47.2 | 0.322 | 9.26 | 0.379 | 0.642 | -- | -0.0377 | -- | 0.179 | 8.68 | -- | -- | -- | -- |
| 47.21 | 0.322 | 9.26 | 0.378 | 0.642 | -- | -- | -- | 0.179 | 8.69 | -- | -- | -- | -- |
| 68.95 | 0.387 | 9.28 | 0.339 | -- | -0.578 | -- | -- | 0.167 | -- | 56.55 | 8 | -- | -- |
| 45.9 | 0.316 | 9.26 | -- | 0.842 | -0.569 | -- | -- | 0.136 | 9.75 | 6.07 | 9 | -- | -- |
| 70.47 | 0.392 | 9.27 | 0.38 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 50.98 | 0.334 | 9.27 | -- | 0.643 | -- | -- | -- | 0.137 | 8.65 | -- | -- | -- | -- |
| 65.2 | 0.376 | 9.28 | -- | -- | -0.987 | -- | -- | 0.0989 | -- | 54.51 | 954 | -- | -- |
| 74.27 | 0.402 | 9.28 | -- | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 3 | 33.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 8 | 33.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 9 | 33.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 10 | 33.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 11 | 33.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 13 | 34.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 14 | 34.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 16 | 34.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 17 | 34.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 20 | 34.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 21 | 34.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 22 | 34.01 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 26 | 34.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 27 | 34.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 28 | 34.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 32 | 34.13 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 33 | 34.16 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 35 | 34.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 36 | 34.24 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 40 | 34.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 42 | 34.33 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 44 | 34.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 45 | 34.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 46 | 34.47 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 47 | 34.48 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 49 | 34.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 50 | 34.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 52 | 34.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 53 | 34.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 55 | 34.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 56 | 34.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 59 | 34.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 60 | 34.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 62 | 34.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 66 | 34.60 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 69 | 34.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 74 | 34.71 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 77 | 34.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 80 | 34.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 87 | 34.95 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 88 | 34.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 115 | 35.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 121 | 35.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 169 | 35.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 173 | 35.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 175 | 35.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 177 | 35.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 178 | 35.32 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 181 | 35.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 182 | 35.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 183 | 35.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 186 | 35.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 208 | 35.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 229 | 35.54 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 248 | 35.60 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 265 | 35.62 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 267 | 35.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 270 | 35.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 271 | 35.65 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 272 | 35.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 274 | 35.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 279 | 35.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 280 | 35.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 281 | 35.68 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 283 | 35.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 284 | 35.68 | temperature | 15.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 286 | 35.69 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 314 | 35.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 319 | 35.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 325 | 35.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 345 | 35.84 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 348 | 35.85 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 349 | 35.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 353 | 35.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 376 | 35.91 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 393 | 35.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 403 | 35.96 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 423 | 36.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 474 | 36.09 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 497 | 36.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 500 | 36.18 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 502 | 36.18 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 504 | 36.18 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 505 | 36.18 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 507 | 36.18 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 508 | 36.18 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 509 | 36.18 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 513 | 36.18 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 520 | 36.20 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 540 | 36.24 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 559 | 36.34 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 572 | 36.41 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 578 | 36.42 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 580 | 36.42 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 583 | 36.42 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 584 | 36.43 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 585 | 36.43 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 624 | 36.46 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 657 | 36.51 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 669 | 36.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 671 | 36.53 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 715 | 36.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 722 | 36.63 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 752 | 36.67 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 858 | 36.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 859 | 36.83 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 6 |
| 867 | 36.85 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 880 | 36.85 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 930 | 36.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 951 | 36.92 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 955 | 36.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 963 | 36.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 966 | 36.94 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 968 | 36.94 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 969 | 36.94 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 974 | 36.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 980 | 36.94 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 13 |