Os08g0337700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RabGAP/TBC domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0337700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : RabGAP/TBC domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.99 | 0.282 | 10.4 | -0.948 | 1.15 | -1.56 | -0.0446 | 0.183 | -0.192 | 21.4 | 28.12 | 52 | -- | -- |
| 36.02 | 0.28 | 10.3 | -0.916 | 1.15 | -1.56 | -0.00646 | -- | -0.186 | 21.3 | 27.92 | 57 | -- | -- |
| 35.99 | 0.279 | 10.3 | -0.945 | 1.15 | -1.55 | -- | 0.167 | -0.19 | 21.3 | 28.03 | 51 | -- | -- |
| 36.02 | 0.28 | 10.3 | -0.917 | 1.15 | -1.56 | -- | -- | -0.186 | 21.3 | 27.92 | 57 | -- | -- |
| 64.15 | 0.373 | 10.3 | -1.28 | -- | -2.24 | -- | 1.33 | -0.25 | -- | 55.6 | 566 | -- | -- |
| 69.83 | 0.392 | 10.3 | -0.522 | 1.14 | -- | 0.243 | -- | 0.151 | 19.7 | -- | -- | -- | -- |
| 70 | 0.392 | 10.3 | -0.529 | 1.14 | -- | -- | -- | 0.151 | 19.7 | -- | -- | -- | -- |
| 65.46 | 0.377 | 10.3 | -1.05 | -- | -2.21 | -- | -- | -0.188 | -- | 63.91 | 567 | -- | -- |
| 55.57 | 0.349 | 10.3 | -- | 1.18 | -1.17 | -- | -- | -0.0114 | 20.9 | 27.76 | 53 | -- | -- |
| 140.69 | 0.554 | 10.2 | -0.543 | -- | -- | -- | -- | 0.135 | -- | -- | -- | -- | -- |
| 77.36 | 0.411 | 10.3 | -- | 1.15 | -- | -- | -- | 0.21 | 19.7 | -- | -- | -- | -- |
| 92.09 | 0.447 | 10.3 | -- | -- | -1.84 | -- | -- | -0.0249 | -- | 74.13 | 541 | -- | -- |
| 148.47 | 0.569 | 10.2 | -- | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 2 | 36.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 4 | 36.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 7 | 36.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 11 | 36.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 19 | 37.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 20 | 37.20 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 24 | 37.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 29 | 37.55 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 39 | 37.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 41 | 37.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 49 | 37.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 71 | 38.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 79 | 38.40 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 90 | 38.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 114 | 38.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 119 | 38.70 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 138 | 38.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 163 | 39.06 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 191 | 39.27 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 222 | 39.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 234 | 39.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 22 |
| 382 | 40.17 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 403 | 40.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 416 | 40.29 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 517 | 40.62 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 556 | 40.78 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 23 |
| 577 | 40.87 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 23 |
| 590 | 40.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 601 | 40.94 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 632 | 41.03 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 12 |
| 773 | 41.60 | temperature | 10 | 90 | > th | dose dependent | sin | 8 | NA |
| 851 | 41.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 873 | 41.89 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 19 |
| 912 | 42.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 942 | 42.09 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 949 | 42.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 967 | 42.14 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 23 |
| 984 | 42.18 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |