Os02g0709800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RabGAP/TBC domain containing protein.
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Os02g0709800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RabGAP/TBC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.19 | 0.376 | 7.5 | 0.211 | 0.743 | 1.6 | -0.534 | 0.0507 | -0.0426 | 13.1 | 25.55 | 104 | -- | -- |
| 64.19 | 0.373 | 7.5 | 0.218 | 0.749 | 1.59 | -0.538 | -- | -0.0372 | 13.2 | 25.66 | 104 | -- | -- |
| 65.08 | 0.376 | 7.51 | 0.164 | 0.759 | 1.64 | -- | 0.37 | -0.0355 | 13.3 | 25.7 | 98 | -- | -- |
| 65.35 | 0.377 | 7.5 | 0.204 | 0.762 | 1.6 | -- | -- | -0.0354 | 13.2 | 25.8 | 96 | -- | -- |
| 85.62 | 0.431 | 7.51 | 0.314 | -- | 1.27 | -- | -0.661 | -0.0523 | -- | 26.84 | 886 | -- | -- |
| 100.57 | 0.47 | 7.58 | -0.166 | 0.447 | -- | -0.621 | -- | -0.372 | 12.2 | -- | -- | -- | -- |
| 102.22 | 0.473 | 7.58 | -0.19 | 0.449 | -- | -- | -- | -0.375 | 12.3 | -- | -- | -- | -- |
| 86.18 | 0.432 | 7.52 | 0.184 | -- | 1.33 | -- | -- | -0.0839 | -- | 26.49 | 888 | -- | -- |
| 66.33 | 0.379 | 7.51 | -- | 0.743 | 1.52 | -- | -- | -0.0712 | 13.2 | 25.79 | 96 | -- | -- |
| 114.92 | 0.501 | 7.59 | -0.205 | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
| 103.17 | 0.475 | 7.57 | -- | 0.452 | -- | -- | -- | -0.353 | 12.4 | -- | -- | -- | -- |
| 86.96 | 0.434 | 7.53 | -- | -- | 1.25 | -- | -- | -0.119 | -- | 26.46 | 882 | -- | -- |
| 116.03 | 0.503 | 7.58 | -- | -- | -- | -- | -- | -0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 3 | 63.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 4 | 63.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 6 | 63.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 8 | 63.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 11 | 64.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 14 | 64.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 19 | 64.51 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 22 | 64.55 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 25 | 64.59 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 27 | 64.62 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 29 | 64.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 31 | 64.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 37 | 64.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 39 | 65.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 44 | 65.15 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 63 | 65.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 101 | 66.18 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 106 | 66.25 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 165 | 67.21 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 171 | 67.28 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 206 | 67.76 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 220 | 67.95 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 264 | 68.45 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 276 | 68.51 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 437 | 69.96 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 19 |
| 478 | 70.22 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 585 | 70.97 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 16 |
| 593 | 71.01 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 18 |
| 744 | 71.90 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 753 | 71.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 759 | 71.96 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 982 | 73.22 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 988 | 73.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 15 |