Os01g0908100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RabGAP/TBC domain containing protein.
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Os01g0908100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RabGAP/TBC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.53 | 0.268 | 9.13 | -0.962 | 0.716 | -0.577 | 0.00541 | 0.328 | 0.0182 | 0.127 | 79 | 49 | -- | -- |
| 32.68 | 0.266 | 9.13 | -0.972 | 0.713 | -0.571 | -0.106 | -- | 0.0164 | 0.105 | 79 | 50 | -- | -- |
| 32.53 | 0.266 | 9.13 | -0.962 | 0.716 | -0.577 | -- | 0.325 | 0.0181 | 0.126 | 79 | 48 | -- | -- |
| 32.72 | 0.266 | 9.13 | -0.964 | 0.721 | -0.561 | -- | -- | 0.0192 | 0.122 | 79 | 48 | -- | -- |
| 50.01 | 0.331 | 9.1 | -0.972 | -- | -1.29 | -- | 0.504 | 0.0751 | -- | 164.5 | 4 | -- | -- |
| 37.82 | 0.288 | 9.12 | -0.998 | 0.929 | -- | -0.055 | -- | 0.0469 | 0.738 | -- | -- | -- | -- |
| 37.83 | 0.288 | 9.12 | -0.996 | 0.929 | -- | -- | -- | 0.0471 | 0.74 | -- | -- | -- | -- |
| 50.35 | 0.33 | 9.1 | -0.98 | -- | -1.26 | -- | -- | 0.0717 | -- | 179.8 | 2 | -- | -- |
| 57.05 | 0.352 | 9.1 | -- | 0.682 | -0.629 | -- | -- | 0.124 | 23.9 | 79.06 | 58 | -- | -- |
| 91.77 | 0.448 | 9.1 | -0.963 | -- | -- | -- | -- | 0.0639 | -- | -- | -- | -- | -- |
| 63.99 | 0.374 | 9.1 | -- | 0.913 | -- | -- | -- | 0.158 | 0.69 | -- | -- | -- | -- |
| 75.51 | 0.406 | 9.1 | -- | -- | -1.38 | -- | -- | 0.0987 | -- | 79.06 | 58 | -- | -- |
| 116.22 | 0.503 | 9.08 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.65 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 2 | 31.70 | humidity | 50 | 10 | > th | dose dependent | sin | 21 | NA |
| 9 | 31.87 | humidity | 90 | 30 | < th | dose dependent | rect. | 6 | 12 |
| 15 | 32.00 | humidity | 80 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 19 | 32.04 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 20 | 32.05 | humidity | 90 | 10 | < th | dose dependent | sin | 21 | NA |
| 30 | 32.08 | humidity | 80 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 147 | 32.42 | humidity | 60 | 10 | > th | dose dependent | rect. | 9 | 12 |
| 148 | 32.42 | humidity | 50 | 90 | > th | dose dependent | rect. | 9 | 12 |
| 154 | 32.42 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 309 | 32.58 | humidity | 80 | 30 | < th | dose dependent | no | NA | NA |
| 441 | 32.73 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 476 | 32.76 | temperature | 20 | 30 | > th | dose dependent | rect. | 22 | 20 |
| 498 | 32.79 | humidity | 80 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 523 | 32.82 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 526 | 32.82 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 564 | 32.86 | humidity | 80 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 570 | 32.87 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 572 | 32.88 | humidity | 80 | 30 | < th | dose dependent | rect. | 11 | 9 |
| 604 | 32.93 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 615 | 32.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 621 | 32.95 | temperature | 20 | 30 | > th | dose dependent | rect. | 24 | 18 |
| 649 | 32.99 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 658 | 33.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 701 | 33.07 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 715 | 33.09 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 726 | 33.10 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 728 | 33.10 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 729 | 33.10 | humidity | 60 | 270 | > th | dose independent | rect. | 23 | 22 |
| 736 | 33.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 759 | 33.12 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 786 | 33.15 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 23 |
| 811 | 33.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 870 | 33.25 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 878 | 33.26 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 915 | 33.29 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 12 |
| 940 | 33.32 | humidity | 50 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 943 | 33.33 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 968 | 33.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 983 | 33.39 | humidity | 60 | 270 | > th | dose independent | rect. | 10 | 10 |