BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0528500 Os02g0528500|AK063979
(197 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0528500 Nucleic acid-binding, OB-fold domain containin... 383 e-107
Os11g0625600 227 5e-60
Os08g0333300 226 7e-60
Os11g0243100 226 7e-60
Os07g0651500 Protein of unknown function DUF889, eukaryote ... 226 8e-60
Os11g0475900 221 3e-58
Os10g0194001 196 1e-50
Os07g0113000 Protein of unknown function DUF889, eukaryote ... 179 1e-45
Os12g0539300 146 8e-36
Os01g0838100 Nucleic acid-binding, OB-fold domain containin... 137 4e-33
Os01g0556600 Protein of unknown function DUF889, eukaryote ... 132 2e-31
Os10g0107100 110 7e-25
Os12g0459300 Nucleic acid-binding, OB-fold domain containin... 107 5e-24
Os01g0383200 105 2e-23
Os12g0454300 Protein of unknown function DUF889, eukaryote ... 105 3e-23
Os04g0300175 Protein of unknown function DUF889, eukaryote ... 103 7e-23
Os10g0502700 102 2e-22
Os01g0244200 Triosephosphate isomerase family protein 100 7e-22
Os01g0223400 Nucleic acid-binding, OB-fold domain containin... 89 3e-18
Os03g0855700 Nucleic acid-binding, OB-fold domain containin... 86 2e-17
Os04g0362550 84 5e-17
Os12g0511700 82 2e-16
Os10g0377500 82 3e-16
Os07g0418100 Protein of unknown function DUF889, eukaryote ... 79 2e-15
Os07g0642100 Nucleic acid-binding, OB-fold domain containin... 78 3e-15
Os01g0175300 Nucleic acid-binding, OB-fold domain containin... 77 9e-15
Os04g0604533 77 1e-14
Os03g0181900 77 1e-14
Os02g0295300 75 2e-14
>Os02g0528500 Nucleic acid-binding, OB-fold domain containing protein
Length = 197
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/197 (93%), Positives = 184/197 (93%)
Query: 1 MYTTFFLFFYTNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGL 60
MYTTFFLFFYTNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGL
Sbjct: 1 MYTTFFLFFYTNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGL 60
Query: 61 ALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEIN 120
ALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWI NKTVRELLEIN
Sbjct: 61 ALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIEAPARAAVEEVAENKTVRELLEIN 120
Query: 121 PHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRI 180
PHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRI
Sbjct: 121 PHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRI 180
Query: 181 VVIAGDDSDDAMFVLFG 197
VVIAGDDSDDAMFVLFG
Sbjct: 181 VVIAGDDSDDAMFVLFG 197
>Os11g0625600
Length = 2171
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 139/185 (75%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
SNST+ V+LW E+A AF+A++++ AG+++ Q+I+FVGTL K+Y G+GL ++G S CKWY+
Sbjct: 1755 SNSTMPVTLWGERADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYL 1814
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAH 132
N+D+P ++ELK+ NF+PI+W+ KT++E+L +NPHK + RF +
Sbjct: 1815 NLDIPEVLELKESFSANFRPISWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVN 1874
Query: 133 VTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAM 192
VTVRRIC++ WWY SC+ C++ +KPYGS+YKC+SCSNI + PRY++V+IAGD S +A
Sbjct: 1875 VTVRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIAGDASSNAT 1934
Query: 193 FVLFG 197
F+LFG
Sbjct: 1935 FILFG 1939
>Os08g0333300
Length = 2183
Score = 226 bits (576), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 139/185 (75%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
SNST+ V+LW E+A AF+A++++ AG+++ Q+I+FVGTL K+Y G+GL ++G S CKWY+
Sbjct: 1767 SNSTMPVTLWGERADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYL 1826
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAH 132
N+D+P ++ELK+ NF+P++W+ KT++E+L +NPHK + RF +
Sbjct: 1827 NLDIPEVLELKESFSANFRPVSWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVN 1886
Query: 133 VTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAM 192
VTVRRIC++ WWY SC+ C++ +KPYGS+YKC+SCSNI + PRY++V+IAGD S +A
Sbjct: 1887 VTVRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIAGDASSNAT 1946
Query: 193 FVLFG 197
F+LFG
Sbjct: 1947 FILFG 1951
>Os11g0243100
Length = 2171
Score = 226 bits (576), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 139/185 (75%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
SNST+ V+LW E+A AF+A++++ AG+++ Q+I+FVGTL K+Y G+GL ++G S CKWY+
Sbjct: 1755 SNSTMPVTLWGERADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYL 1814
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAH 132
N+D+P ++ELK+ NF+P++W+ KT++E+L +NPHK + RF +
Sbjct: 1815 NLDIPEVLELKESFSANFRPVSWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVN 1874
Query: 133 VTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAM 192
VTVRRIC++ WWY SC+ C++ +KPYGS+YKC+SCSNI + PRY++V+IAGD S +A
Sbjct: 1875 VTVRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIAGDASSNAT 1934
Query: 193 FVLFG 197
F+LFG
Sbjct: 1935 FILFG 1939
>Os07g0651500 Protein of unknown function DUF889, eukaryote family protein
Length = 2021
Score = 226 bits (576), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 139/185 (75%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
SNST+ V+LW E+A AF+A++++ AG+++ Q+I+FVGTL K+Y G+GL ++G S CKWY+
Sbjct: 1804 SNSTMPVTLWGERADAFDANSVYNAGQTQAQVIVFVGTLVKDYTGLGLTVTGSSPCKWYL 1863
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAH 132
N+D+P ++ELK+ NF+P++W+ KT++E+L +NPHK + RF +
Sbjct: 1864 NLDIPEVLELKESFSANFRPVSWVDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVN 1923
Query: 133 VTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAM 192
VTVRRIC++ WWY SC+ C++ +KPYGS+YKC+SCSNI + PRY++V+IAGD S +A
Sbjct: 1924 VTVRRICSENSWWYNSCRLCYRTSKPYGSSYKCSSCSNIGIPDPRYKVVLIAGDASSNAT 1983
Query: 193 FVLFG 197
F+LFG
Sbjct: 1984 FILFG 1988
>Os11g0475900
Length = 1429
Score = 221 bits (562), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 133/185 (71%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
SNSTL V+LW ++A+ F+AD I+ AG+++PQ+I+FVG L K+YPG+GL ++G S C+WY+
Sbjct: 1019 SNSTLPVTLWGDKAAIFDADTIYNAGQTQPQVIVFVGMLVKDYPGLGLIVTGSSPCQWYL 1078
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAH 132
N+D+P ++ELK+ NF+ I W+ K + E+L +NPHK + RF
Sbjct: 1079 NLDIPEVLELKESFSANFRAIAWVDNPATGYNQDIAEEKKILEILALNPHKNRSTRFIVT 1138
Query: 133 VTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAM 192
VTV++IC + WWY SC+ C++ ++PYGSTYKC+ CSNI + PRY++V+IAGDDS DA
Sbjct: 1139 VTVKKICTENSWWYNSCRMCYRTSRPYGSTYKCSGCSNIGIPDPRYKVVLIAGDDSCDAT 1198
Query: 193 FVLFG 197
F+LFG
Sbjct: 1199 FILFG 1203
>Os10g0194001
Length = 495
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 114/161 (70%)
Query: 37 AGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWI 96
AG+++ Q+++FVGTL K+Y G+GL L+G S CKWYIN+++P + EL + TNFQPI W+
Sbjct: 175 AGQTQAQVVVFVGTLVKDYRGLGLTLTGSSPCKWYINLNIPKVAELNESFSTNFQPIKWV 234
Query: 97 XXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVA 156
K+ E+L INPHK K RF +VTVRRICN+ WY SC+ C+K +
Sbjct: 235 DEPATGYNQDVPEEKSTAEILNINPHKHKGTRFIVNVTVRRICNEYSCWYNSCRICYKTS 294
Query: 157 KPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAMFVLFG 197
KPYGS+Y+C+SCSNI + PRY++V+IAGDD +A F+LFG
Sbjct: 295 KPYGSSYRCSSCSNIGIPDPRYKVVLIAGDDDANATFILFG 335
>Os07g0113000 Protein of unknown function DUF889, eukaryote family protein
Length = 1790
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 119/213 (55%), Gaps = 62/213 (29%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
+NSTLNVSLWAEQA AF+A++IHKAG+ LALS GSACKW
Sbjct: 1393 NNSTLNVSLWAEQALAFDAESIHKAGQR-------------------LALSRGSACKW-- 1431
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCK------- 125
G NFQPI + +KTVRELL++NPHK +
Sbjct: 1432 -------------IGANFQPIKLLQAPTTNIADENADDKTVRELLDMNPHKNRAPATNIA 1478
Query: 126 ---------------------KVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYK 164
+ RFQA+VT+R+ICND WWY SC++C +V KP+G TYK
Sbjct: 1479 DENADDKTVRELLDMNPHKNRRTRFQANVTIRKICNDSSWWYNSCEKCLRVVKPFGYTYK 1538
Query: 165 CTSCSNIAVAVPRYRIVVIAGDDSDDAMFVLFG 197
CT C NIA+AVPRY++ V+AGDD+ DA+F+LFG
Sbjct: 1539 CTGCYNIAMAVPRYKLSVLAGDDTADAVFILFG 1571
>Os12g0539300
Length = 1822
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 106/190 (55%), Gaps = 30/190 (15%)
Query: 11 TNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKW 70
+N NS LNV+LW E+A AF+A+ I+ AGK EPQI+LFVGTL K+Y G+ G +
Sbjct: 1548 SNINSILNVALWGERALAFQAEDIYNAGKKEPQIVLFVGTLVKDYTKSGIDSKIGMMYIF 1607
Query: 71 YIN---IDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKV 127
N D+ D G QP+ ++
Sbjct: 1608 SHNNRYTDLGKNCSQSD--GLKQQPLYMKMTLL-------------------------RL 1640
Query: 128 RFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDD 187
RF VT+R+ICN+ WWY SCQ+CFK AKPYG TYKC SCS I +A PRY++ + AGDD
Sbjct: 1641 RFITSVTIRKICNENSWWYRSCQKCFKGAKPYGYTYKCGSCSWIGMATPRYKLALTAGDD 1700
Query: 188 SDDAMFVLFG 197
SD+A F+LFG
Sbjct: 1701 SDNAEFILFG 1710
>Os01g0838100 Nucleic acid-binding, OB-fold domain containing protein
Length = 474
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
+N + + LW E A F+ADA+H G+ + +FV TL K Y LSGGSACKWY+
Sbjct: 213 ANCEVKLVLWGEHAPDFDADAVHSVGQDNAVVGIFVDTLMKAYNN-EETLSGGSACKWYL 271
Query: 73 NIDVPAIVELKDKTGTNFQPINWIXXXX----XXXXXXXXXNKTVRELLEINPHKCKKVR 128
N D+P I + D G + I WI +K+V +L +I+P +
Sbjct: 272 NEDIPEINQFFDSLGDSAPKIQWISTGAESFGSSQRPARLEHKSVADLKKIDPWEAAGAG 331
Query: 129 FQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDS 188
F VT+ ++ + WW+ SC RC + A YGS+YKC+S + A+P+YR+ +I D +
Sbjct: 332 FSCTVTIAKLSPSQSWWFSSCSRCHRAATAYGSSYKCSSGCSSVTAIPKYRLCLIGTDGT 391
Query: 189 DDAMFVLFG 197
+ A FVLFG
Sbjct: 392 NSAEFVLFG 400
>Os01g0556600 Protein of unknown function DUF889, eukaryote family protein
Length = 1932
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 28/204 (13%)
Query: 7 LFFYTNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGL------ 60
++ N T N+ LW E+A++F AD I AGK +PQI++FVGTL + + + L
Sbjct: 1337 VYMRNAENETTNIVLWGERATSFPADEILSAGKEKPQIVIFVGTLVRGHGSVVLIAWDTV 1396
Query: 61 -----ALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRE 115
+LSG SACK VE N++ I WI KT+ E
Sbjct: 1397 VIGNVSLSGNSACK---------CVE------GNYEAIKWIDLPAAPILQNNCEQKTIAE 1441
Query: 116 LLEINPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKC--TSCSNIAV 173
+ + +P K KK F V ++++ + WWY +C C K AKPYG+ Y+C ++C
Sbjct: 1442 IRDPHPFKFKKHEFSVTVVIKKLNMEYSWWYTACDICKKTAKPYGNLYRCGNSTCPPTGS 1501
Query: 174 AVPRYRIVVIAGDDSDDAMFVLFG 197
A PR+++ VIAGDD+ D F++FG
Sbjct: 1502 ASPRFKLSVIAGDDTGDTTFIIFG 1525
>Os10g0107100
Length = 794
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 75/111 (67%)
Query: 87 GTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQAHVTVRRICNDKCWWY 146
TNFQPI W+ K++ E+L INPHK K RF +VTVRRICN+ WWY
Sbjct: 574 STNFQPIKWVDEPATGYNQDVPEEKSIAEILNINPHKHKGTRFIVNVTVRRICNEYSWWY 633
Query: 147 GSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSDDAMFVLFG 197
SC+ C+K +KPYGS+Y+ +SCS+I + PRY++V+IA DD +A F+LFG
Sbjct: 634 NSCRICYKTSKPYGSSYRYSSCSSIGITDPRYKVVLIASDDDANATFILFG 684
>Os12g0459300 Nucleic acid-binding, OB-fold domain containing protein
Length = 116
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 67/96 (69%)
Query: 30 EADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYINIDVPAIVELKDKTGTN 89
+ I+K G+++PQ+++FVGTL ++Y GIGL ++G S CKWYIN+D+P ++ELK++ N
Sbjct: 16 QLQKIYKDGQTKPQVVVFVGTLVRDYAGIGLTITGSSPCKWYINLDIPDVLELKERFSVN 75
Query: 90 FQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCK 125
FQPI W+ KT++E+L++NPHK K
Sbjct: 76 FQPIKWVENAAPAFNQDTPEEKTIKEILKLNPHKYK 111
>Os01g0383200
Length = 1741
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 63/85 (74%)
Query: 6 FLFFYTNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGG 65
FL Y NSNSTL+++LW + A+AF A+ +HKAG++ PQ+ +FVGTL +NY GIGL L+G
Sbjct: 1388 FLATYKNSNSTLHITLWGKTAAAFNAEEVHKAGQTRPQVAVFVGTLVRNYTGIGLTLTGS 1447
Query: 66 SACKWYINIDVPAIVELKDKTGTNF 90
S CKWYI +D+ +ELK +T +
Sbjct: 1448 SPCKWYIGLDMVEALELKQRTSKPY 1472
>Os12g0454300 Protein of unknown function DUF889, eukaryote family protein
Length = 1051
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 62/73 (84%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
SNSTL ++LW E+A+AF+A+ I+ AG+ +PQ+++FVGTL KNY G+GL L+G S CKWYI
Sbjct: 709 SNSTLPLTLWGERATAFDAENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYI 768
Query: 73 NIDVPAIVELKDK 85
N+++P +VELK++
Sbjct: 769 NLEIPEVVELKER 781
>Os04g0300175 Protein of unknown function DUF889, eukaryote family protein
Length = 1718
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 41 EPQIILFVGTLAKNYPGIGLALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXX 100
EPQI++FVGTL K + + LSG +ACKWYINI I +D +P+ W+
Sbjct: 1583 EPQIVIFVGTLVKGFRR-EVYLSGNNACKWYINIGCDEIQSFRDSMKDKHEPVKWLDLPP 1641
Query: 101 XXXXXXXXXNKTVRELLEINPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYG 160
KT+ E+ ++NP + KK F VT+++I D WWY +C +C + AKPYG
Sbjct: 1642 LNAIRATAEQKTIVEIKDLNPFEYKKNEFIVTVTIKKI--DGPWWYNACDKCKRTAKPYG 1699
Query: 161 STYKC--TSCSNIAVAVPR 177
Y+C C A PR
Sbjct: 1700 YLYRCFGDDCPPTVPASPR 1718
>Os10g0502700
Length = 1169
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 60 LALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEI 119
++LSG SACKWYIN++ P + K+ ++PI I K++ ++ ++
Sbjct: 475 ISLSGNSACKWYINVNTPEVNSFKESIQGKYEPIKMIELPAVGAVRTGAEQKSIAQIKDL 534
Query: 120 NPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYR 179
NP +K F V +++I + WWY +C C + AKPYG +Y R++
Sbjct: 535 NPFMFRKNEFMVTVVIKKIDTESSWWYPACDSCKRTAKPYGKSY-------------RFK 581
Query: 180 IVVIAGDDSDDAMFVLFG 197
+ +IAGDD+ D FVLFG
Sbjct: 582 LSLIAGDDTGDTKFVLFG 599
>Os01g0244200 Triosephosphate isomerase family protein
Length = 2498
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 60 LALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEI 119
++LSG SACKWYIN++ P + K+ ++PI I K++ ++ ++
Sbjct: 1804 ISLSGNSACKWYINVNTPEVNSFKESIQGKYEPIKMIELPAVGAVRTGAEQKSIAQIKDL 1863
Query: 120 NPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYR 179
NP +K F V +++I + WWY +C C + AKPYG +Y R +
Sbjct: 1864 NPFMFRKNEFMVTVVIKKIDTESSWWYPACDTCKRTAKPYGKSY-------------RIK 1910
Query: 180 IVVIAGDDSDDAMFVLFG 197
+ +IAGDD+ D FVLFG
Sbjct: 1911 LSLIAGDDTGDTKFVLFG 1928
>Os01g0223400 Nucleic acid-binding, OB-fold domain containing protein
Length = 249
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 7 LFFYTNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGS 66
+F N+ LNV+LW E+A++F AD + AG+ EPQI++FVGTL K Y + +LSG S
Sbjct: 172 VFIRNTDNAILNVALWGERATSFPADEVFVAGQKEPQIVIFVGTLVKGYGDV--SLSGNS 229
Query: 67 ACKWYINIDVPAIVELKD 84
ACKWYIN D P ++ L++
Sbjct: 230 ACKWYINADTPEVISLRN 247
>Os03g0855700 Nucleic acid-binding, OB-fold domain containing protein
Length = 599
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Query: 11 TNSNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKW 70
TN T+ V+LW A+ F A+ + + + ++LFVG K + LAL G + C+W
Sbjct: 223 TNGRETVVVALWGPHATQFHAENLQQQADNGHVVMLFVGLTVK-FRDRQLALQGSTVCRW 281
Query: 71 YINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQ 130
Y N + + L N Q + I N V ++ ++NPH+ +
Sbjct: 282 YPNAPIQETISLISSLHGNPQVVRMIEANFGQKEAI---NVKVSDICDLNPHEALGNSYV 338
Query: 131 AHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTSCSNIAVAVPRYRIVVIAGDDSD- 189
++ +R + + WWY +C + G+ YKC CS A+ RYR+V++ D SD
Sbjct: 339 VNIIIRDLVPAEPWWYIACSTYKRGTAREGNAYKCPRCSTDAIET-RYRVVIMGIDPSDL 397
Query: 190 ------DAMFVLFG 197
A F FG
Sbjct: 398 ANDQAKAAEFTFFG 411
>Os04g0362550
Length = 1410
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 111 KTVRELLEINPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKC--TSC 168
K++ E+ ++NP KK+ F VT+++I D WWY +C RC + A+PYG TY+C C
Sbjct: 830 KSIIEIKDLNPFVHKKLEFVVTVTIKKI--DGSWWYVACDRCRRTARPYGKTYRCGGGDC 887
Query: 169 SNIAVAVPRYRIVVIAGDDSDDAMFVLFG 197
A PR+++ +IAGDD+ D FV+FG
Sbjct: 888 PATVPASPRFKLGLIAGDDTADTKFVMFG 916
>Os12g0511700
Length = 1312
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 31/140 (22%)
Query: 60 LALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEI 119
++LS SACKWYINID P L +++PI W+ KT+ E+ E+
Sbjct: 751 VSLSDNSACKWYINIDTPDAKSLAASVEGSYEPIKWLDLPAGPAAHNNGEEKTIVEIREL 810
Query: 120 NPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKC--TSCSNIAVAVPR 177
+P K FK KPYGS+Y+C +C + A PR
Sbjct: 811 HPFK-----------------------------FKTTKPYGSSYRCGNNTCPPVVSASPR 841
Query: 178 YRIVVIAGDDSDDAMFVLFG 197
+++ VIAGD + D F++FG
Sbjct: 842 FKLSVIAGDHTADTTFIVFG 861
>Os10g0377500
Length = 1414
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 31/140 (22%)
Query: 60 LALSGGSACKWYINIDVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEI 119
++LSG SACKWYINID P L +++PI W+ KT+ E+ E+
Sbjct: 879 VSLSGNSACKWYINIDTPDAKSLAASVEGSYEPIKWLDLPAGPAAHNNGEEKTIAEIREL 938
Query: 120 NPHKCKKVRFQAHVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKC--TSCSNIAVAVPR 177
+P K FK KPYGSTY+C C + A PR
Sbjct: 939 HPFK-----------------------------FKTTKPYGSTYRCGNNKCPPVVSASPR 969
Query: 178 YRIVVIAGDDSDDAMFVLFG 197
+++ VIAG D F++FG
Sbjct: 970 FKLSVIAGGHIADTTFIVFG 989
>Os07g0418100 Protein of unknown function DUF889, eukaryote family protein
Length = 2266
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 89 NFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCK-----------KVRFQAHVTVRR 137
+++PI W+ KT+ E+ E++P K K K F V +++
Sbjct: 1630 SYEPIKWLDLPSGPAAHNNGEEKTIAEIRELHPFKFKVVLTVTILWKQKHEFLVTVVIKK 1689
Query: 138 ICNDKCWWYGSCQRCFKVAKPYGSTYKC--TSCSNIAVAVPRYRIVVIAGDDSDDAMFVL 195
+ + WWY +C C K AKPYGS+Y+C +C + A P +++ VIAGD + D F++
Sbjct: 1690 LNMEYSWWYTACDICKKTAKPYGSSYRCGNNTCPPVVSASPWFKLSVIAGDHTADTTFIV 1749
Query: 196 FG 197
FG
Sbjct: 1750 FG 1751
>Os07g0642100 Nucleic acid-binding, OB-fold domain containing protein
Length = 145
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKW 70
SNSTL ++LW A+AF A+ ++ AG+ +PQ+I+FVGT+ KNY GIGL L+G S CKW
Sbjct: 88 SNSTLPITLWGNTAAAFNAEELYNAGQKKPQVIVFVGTVVKNYKGIGLTLNGSSPCKW 145
>Os01g0175300 Nucleic acid-binding, OB-fold domain containing protein
Length = 523
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
S T+++SL ++A F+ + I + G++ I +FVGT K G LSG +AC+WYI
Sbjct: 173 SGKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYI 232
Query: 73 NI-DVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQA 131
N D+P I + + PI + +KT+ EL EI+P K ++Q
Sbjct: 233 NENDIPEIKMFQKCLPPHADPIQKLYLQSDEDMQRSIEHKTLAELKEIDPFVDKDEKYQC 292
Query: 132 HVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTS----CSNIAVAVPRYRIVVIAGDD 187
T+ I K W Y +C+ C GS KC C +Y+I IA D
Sbjct: 293 TATIIGIQERKTWCYQACKLCNCKMIWDGSILKCKKENCPCRQYEY---KYKIPFIANDG 349
Query: 188 SDDAMFVLF 196
+ VLF
Sbjct: 350 TASLELVLF 358
>Os04g0604533
Length = 467
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
S T+++SL ++A F+ + I + G++ I +FVGT K G LSG +AC+WYI
Sbjct: 125 SGKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYI 184
Query: 73 NI-DVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQA 131
N D+P I + + PI + +KT+ EL EI+P K ++Q
Sbjct: 185 NENDIPEIKMFQKCLPPHADPIQKLYLQSDEDMQRSIEHKTLAELKEIDPFVDKDEKYQC 244
Query: 132 HVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTS----CSNIAVAVPRYRIVVIAGDD 187
T+ I K W Y +C+ C GS KC C +Y+I IA D
Sbjct: 245 TATIIGIQERKTWCYQACKLCNCKMIWDGSILKCKKENCPCRQYEY---KYKIPFIANDG 301
Query: 188 SDDAMFVLF 196
+ VLF
Sbjct: 302 TASLELVLF 310
>Os03g0181900
Length = 552
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 13 SNSTLNVSLWAEQASAFEADAIHKAGKSEPQIILFVGTLAKNYPGIGLALSGGSACKWYI 72
S T+++SL ++A F+ + I + G++ I +FVGT K G LSG +AC+WYI
Sbjct: 202 SGKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYI 261
Query: 73 NI-DVPAIVELKDKTGTNFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCKKVRFQA 131
N D+P I + + PI + +KT+ EL EI+P K ++Q
Sbjct: 262 NENDIPEIKMFQKCLPPHADPIQKLYLQSDEDMQRSIEHKTLAELKEIDPFVDKDEKYQC 321
Query: 132 HVTVRRICNDKCWWYGSCQRCFKVAKPYGSTYKCTS----CSNIAVAVPRYRIVVIAGDD 187
T+ I K W Y +C+ C GS KC C +Y+I IA D
Sbjct: 322 TATIIGIQERKTWCYQACKLCNCKMIWDGSILKCKKENCPCRQYEY---KYKIPFIANDG 378
Query: 188 SDDAMFVLF 196
+ VLF
Sbjct: 379 TASLELVLF 387
>Os02g0295300
Length = 2169
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 89 NFQPINWIXXXXXXXXXXXXXNKTVRELLEINPHKCK-----------KVRFQAHVTVRR 137
N++PI +I K + E+ +++P K K K +F V +R+
Sbjct: 1112 NYEPIKYIDLPASSDAPNNAEQKKIIEIKDLHPFKFKCANHHPTSGKQKHQFLVTVVIRK 1171
Query: 138 ICNDKCWWYGSCQRCFKVAKPYGSTYKC--TSCSNIAVAVPRYRIVVIAGDDSDDAMFVL 195
I D WWY +C C K AK +GS Y+C +C + A P +++ V+AGDD+ D F++
Sbjct: 1172 INMDSSWWYTACDICNKTAKRFGSGYRCGDPTCPPVISASPGFKLSVLAGDDTADTSFII 1231
Query: 196 FG 197
FG
Sbjct: 1232 FG 1233
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,466,220
Number of extensions: 239785
Number of successful extensions: 853
Number of sequences better than 1.0e-10: 29
Number of HSP's gapped: 824
Number of HSP's successfully gapped: 31
Length of query: 197
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 101
Effective length of database: 12,023,257
Effective search space: 1214348957
Effective search space used: 1214348957
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)