BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0871300 Os01g0871300|AK059062
(458 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0871300 1-aminocyclopropane-1-carboxylate synthase fam... 854 0.0
Os09g0453800 1-aminocyclopropane-1-carboxylate synthase fam... 167 1e-41
Os10g0484700 Aminotransferase, class I and II domain contai... 135 5e-32
Os01g0178000 Aminotransferase, class I and II domain contai... 129 6e-30
Os06g0345200 Similar to Tyrosine aminotransferase 108 8e-24
Os02g0302700 Similar to Nicotianamine aminotransferase A 105 6e-23
AK060557 96 5e-20
Os02g0302400 Similar to Tyrosine aminotransferase-like protein 96 5e-20
Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate s... 92 8e-19
Os03g0195100 Similar to Plastid aminotransferase (Fragment) 76 5e-14
Os05g0196600 73 6e-13
Os01g0192900 1-aminocyclopropane-1-carboxylate synthase fam... 72 6e-13
Os03g0299900 Similar to Plastid aminotransferase (Fragment) 69 6e-12
Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (... 67 3e-11
Os05g0319200 67 3e-11
Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate s... 65 9e-11
>Os01g0871300 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 458
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/430 (96%), Positives = 417/430 (96%)
Query: 29 VCFARASGRCRMASVVVRAEAVDATISPTVSALRPSKTMAITDQATALRQAGVPVIGLAA 88
VCFARASGRCRMASVVVRAEAVDATISPTVSALRPSKTMAITDQATALRQAGVPVIGLAA
Sbjct: 29 VCFARASGRCRMASVVVRAEAVDATISPTVSALRPSKTMAITDQATALRQAGVPVIGLAA 88
Query: 89 GEPDFDTPHVIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGISYSPDQVLVSN 148
GEPDFDTPHVIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGISYSPDQVLVSN
Sbjct: 89 GEPDFDTPHVIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGISYSPDQVLVSN 148
Query: 149 GAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSISENFLLRPELLA 208
GAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSISENFLLRPELLA
Sbjct: 149 GAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSISENFLLRPELLA 208
Query: 209 SKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHT 268
SKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHT
Sbjct: 209 SKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHT 268
Query: 269 SFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKX 328
SFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQK
Sbjct: 269 SFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKA 328
Query: 329 XXXXXXXXXXXXEAVSTMVKAFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFSSYYGS 388
EAVSTMVKAFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFSSYYGS
Sbjct: 329 GLAALNLGYAGGEAVSTMVKAFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFSSYYGS 388
Query: 389 EVEGFGTIKDSESLCMFLLEKAQVALVPGDAFGDDKCIRMSYAAALSTLQTAMEKIKEAV 448
EVEGFGTIKDSESLCMFLLEKAQVALVPGDAFGDDKCIRMSYAAALSTLQTAMEKIKEAV
Sbjct: 389 EVEGFGTIKDSESLCMFLLEKAQVALVPGDAFGDDKCIRMSYAAALSTLQTAMEKIKEAV 448
Query: 449 ALIKPRVAAK 458
ALIKPRVAAK
Sbjct: 449 ALIKPRVAAK 458
>Os09g0453800 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 466
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 186/374 (49%), Gaps = 34/374 (9%)
Query: 84 IGLAAGEPDFDTPHVIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGISYSPD- 142
I L G P+FD P + EA + AI G +Y G EL AI + +++G+ P+
Sbjct: 109 INLGQGFPNFDGPDFVKEAAIQAINAGKNQYARGYGVPELNSAIAERFLKDSGLQVDPEK 168
Query: 143 QVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSISENFLL 202
+V V++G + I +L + +PGDEV++ AP++ SY ++AGA V T +F +
Sbjct: 169 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAN-VKAITLRPPDFSV 227
Query: 203 RPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIY 262
E L + +++ +R +++ +P NPTG ++ +E LE IA + K+ +L+ +DE+Y+ + +
Sbjct: 228 PLEELKAAVSKNTRAIMINTPHNPTGKMFTREELEFIATLCKEN-DVLLFADEVYDKLAF 286
Query: 263 QPAKHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGAS 322
+ A H S AS+PGM++RT+T+N K F++TGW++G+ AP H + S T
Sbjct: 287 E-ADHISMASIPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATC 345
Query: 323 SISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDY------LVKSFKELPGVKISEPQGAF 376
+ Q E + RRDY LV K+ G + G +
Sbjct: 346 TPMQAAAAAALRAPDSYYEEL---------RRDYGAKKALLVNGLKD-AGFIVYPSSGTY 395
Query: 377 YLFIDFSSYYGSEVEGFGTIKDSESLCMFLLEKAQVALVPGDAF-----GDDKCIRMSYA 431
++ +D + FG D E C +L+ + V +P F +R ++
Sbjct: 396 FVMVDHTP--------FGFDNDIE-FCEYLIREVGVVAIPPSVFYLNPEDGKNLVRFTFC 446
Query: 432 AALSTLQTAMEKIK 445
TL+ A+E++K
Sbjct: 447 KDDETLRAAVERMK 460
>Os10g0484700 Aminotransferase, class I and II domain containing protein
Length = 412
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 179/374 (47%), Gaps = 29/374 (7%)
Query: 84 IGLAAGEPDFDTPHVIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGISYSP-D 142
+ LA G PDF P + A AI +Y G + A+ ++ ++G+ P
Sbjct: 30 VNLAEGFPDFPAPAHVKAAAAAAIAADLNQYRHVQGICD---ALAETMKRDHGLRVDPLT 86
Query: 143 QVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSISENFLL 202
V G + A+ A+ GDEVL+ P + +Y LA PV +P L
Sbjct: 87 DFAVCCGQSEAFAAAIFAIIDQGDEVLLFDPAFETYQTCIELARGVPVYVPLDPPSWTLN 146
Query: 203 RPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIY 262
+ L S N +++ ++L SP NPTG V+ +E L IA +K ++DE+YE+I Y
Sbjct: 147 EDKFLKSFTN-RTKAVVLNSPHNPTGKVFSREELLIIAQACQKM-DCFAITDEVYEYITY 204
Query: 263 QPAKHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGAS 322
KH S ASLPGM +RT+ + SK +++TGWR+G+ AP + +A I + T A
Sbjct: 205 DENKHISLASLPGMQERTIITSSLSKTYSVTGWRIGWACAPANIASAIRNIHVKLTDSAP 264
Query: 323 SISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYLVKSFKELPGVKIS-EPQGAFYLFID 381
+ Q+ + S++ + + RRD++++ + G +IS +PQG+ ++F++
Sbjct: 265 APFQE---AALVALTSPPDFYSSLKQDYTARRDFILQVLTDF-GFRISFKPQGSIFVFVE 320
Query: 382 FSSYYGSEVEGFGTIKDSESLCMFLLEKAQVALVPGDAF----GDD-----KCIRMSYAA 432
+ F T L++ A VA VPG F DD + +R ++
Sbjct: 321 LPRSWQLSDMDFVTN---------LIKNAGVAAVPGRGFFHSSTDDPSYHHRYVRFAFCK 371
Query: 433 ALSTLQTAMEKIKE 446
+ TL A EK+++
Sbjct: 372 SNDTLNAAAEKMRK 385
>Os01g0178000 Aminotransferase, class I and II domain containing protein
Length = 394
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 172/378 (45%), Gaps = 37/378 (9%)
Query: 83 VIGLAAGEPDFDTPHVIAEAGMNAIKD-----GYTRYTPNAGTLELRKAICNKLQEENGI 137
V+ LA G + P EA MN IK+ ++Y + G ELR+A+ KL+ EN +
Sbjct: 32 VMSLAQGVVYWQPP----EAAMNKIKEIVWEPSISKYGSDDGLPELREALLEKLRRENKL 87
Query: 138 SYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSIS 197
+ S ++V++GA Q VL +C GD V++ APY+ + + G T +++ S
Sbjct: 88 TKS--SIMVTSGANQAFVNVVLTLCDAGDAVVMFAPYYFNSYMSFQMTGVTDILVGASNP 145
Query: 198 ENFLLRPELLASKINEKS---RLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSD 254
E + L + E + +L+ + +P NP+G+ PK +LE I+++ + LV+ D
Sbjct: 146 ETLHPDVDWLEKVLQENNPIPKLVSVVNPGNPSGAFIPKPMLERISELCRNAGAWLVV-D 204
Query: 255 EIYEHIIYQPAKHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKH---FVAACG 311
YE+ +Y +H + + + FSKA+ M GWR+GY+A P A
Sbjct: 205 NTYEYFMYDGMEHYCLEG-----NHIVNLFSFSKAYGMMGWRVGYIAHPNEADGLHAQLL 259
Query: 312 KIQSQFTSGASSISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYLVKSFKELPGVKISE 371
K+Q AS I Q+ E + V+ + R+ L+++ L +
Sbjct: 260 KVQDNIPICASIIGQR---LALYALEAGPEWIRERVRDLVKNRELLMEAMSPLGKDSVKG 316
Query: 372 PQGAFYLFIDFSSYYGSEVEGFGTIKDSESLCMFLLEKAQVALVPGDAFGDDKCIRMSYA 431
+GA YL+ D + +L K VA++PG A G IR+S+
Sbjct: 317 GEGAIYLWAKLPE----------KCSDDFEVVRWLANKHGVAVIPGSASGGPGYIRVSFG 366
Query: 432 A-ALSTLQTAMEKIKEAV 448
S + A E+++ +
Sbjct: 367 GLKESDTRLAAERLRRGL 384
>Os06g0345200 Similar to Tyrosine aminotransferase
Length = 441
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 170/380 (44%), Gaps = 29/380 (7%)
Query: 82 PVIGLAAGEPD----FDTPHVIAEAGMNAIKDG-YTRYTPNAGTLELRKAICNKLQEENG 136
PVI L+ G+P F T EA A++ G Y Y+ A +L R+AI L +
Sbjct: 45 PVIPLSHGDPSSSACFRTAPEAEEAVAAAVRSGDYNGYSSPATSLPARRAIAEYLSCDLP 104
Query: 137 ISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSI 196
D + +++G Q I + PG +L+P P + + A +
Sbjct: 105 YKLCTDDIFLTSGGTQAIEIVMSVFGQPGANILLPKPGYPKHEAHAVFHRMEVRLYDLVP 164
Query: 197 SENFLLRPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEI 256
+ + E + + +E + +++ +P+NP G+VY E L +IAD K+ LLV++DE+
Sbjct: 165 ERGWEINVEAVEALADENTVAIVITNPNNPCGNVYTYEHLSKIADTASKF-GLLVIADEV 223
Query: 257 YEHIIYQPAKHTSFASLPGMWDRT---LTVNGFSKAFAMTGWRLGYLAA--PKHFVAACG 311
Y H++Y T F + G++ T LT+ SK + + GWR G++A PK +
Sbjct: 224 YGHLVY---GSTPFVPM-GVFGETVPVLTLGAISKRWVVPGWRFGWIAICDPKGILKETK 279
Query: 312 KIQS-----QFTSGASSISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYLVKSFKELPG 366
+ S T+G ++ Q E ++ +E + KE+
Sbjct: 280 VVDSLRSFRNLTTGPATFIQG--AIPHIMKNTNDEFFRKTLELLKETAEICFGEIKEIKC 337
Query: 367 VKI-SEPQGAFYLFIDFSSYYGSEVEGFGTIKDSESLCMFLLEKAQVALVPGDAFGDDKC 425
+ +P+G+F++ + ++ I D C L+++ V L+PG A G +
Sbjct: 338 ITCPHKPEGSFFMMVKL------DISQLSDICDDIDFCSKLVKEESVVLLPGRALGMENW 391
Query: 426 IRMSYAAALSTLQTAMEKIK 445
+R+++A L+ +E++K
Sbjct: 392 LRITFALDPPRLKQGLERVK 411
>Os02g0302700 Similar to Nicotianamine aminotransferase A
Length = 439
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 170/380 (44%), Gaps = 29/380 (7%)
Query: 82 PVIGLAAGEPDFDTPHVIAEAGMNAIKDG-----YTRYTPNAGTLELRKAICNKLQEENG 136
PV+ L G+P + A A +A+ D + Y+ G L R+AI L +
Sbjct: 62 PVLRLGNGDPTASACYRTAPAAEDAVVDALRSGAHNGYSLTVGVLSARRAIAEYLSRDLP 121
Query: 137 ISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSI 196
S + + +++G Q I + + PG +L+P P + Y T +
Sbjct: 122 YELSANDIYLTSGCVQAIEVMISVLAQPGSNILLPKPGFPLYESRTTFSNLEVRHFDLIP 181
Query: 197 SENFLLRPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEI 256
+ + E + + +E + +++ +PSNP GSVY + L +IA+ +K LL+++DE+
Sbjct: 182 ERGWEVDLEGVQAIADENTVAIVVINPSNPCGSVYSYDHLAKIAETARKL-GLLIIADEV 240
Query: 257 YEHIIYQPAKHTSFASLPGMWDRT---LTVNGFSKAFAMTGWRLGYLAA--PKHFVAACG 311
Y+H+ + + F + G++ +T +T+ SK + + GWRLG++A P +
Sbjct: 241 YDHLAF---GNNPFIPI-GVFGKTVPVITLGSISKRWLVPGWRLGWIATCDPNGILKEAK 296
Query: 312 KIQS-----QFTSGASSISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYLVKSFKELPG 366
QS ++ ++ Q + + ++ + D K++ G
Sbjct: 297 VNQSIENYINISTDPATFVQG--AIPQIIANTKEDYFNKILDQLRNAADLCYDKIKDIKG 354
Query: 367 VKI-SEPQGAFYLFIDFSSYYGSEVEGFGTIKDSESLCMFLLEKAQVALVPGDAFGDDKC 425
+ +P+G+ ++ + Y ++GF D C L ++ V ++PG A G
Sbjct: 355 ITCPHKPEGSMFVMVKLDLSY---LDGF---HDDMDFCCRLAKEESVIVLPGSALGLKNW 408
Query: 426 IRMSYAAALSTLQTAMEKIK 445
+R+++A + +L A E+IK
Sbjct: 409 VRITFAIDIPSLVDAFERIK 428
>AK060557
Length = 452
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 25/343 (7%)
Query: 114 YTPNAGTLELRKAICNKLQEENGISYSPDQVLVSNGAKQCITQ-AVLAVCSPGDEVLIPA 172
Y P+ G R+A+ + L V ++ G IT A + +PG VL+P
Sbjct: 107 YAPSCGFPAARRAVADHLSAGARHRTRDADVFMTAGGTGAITAIATVLGGAPGANVLLPR 166
Query: 173 PYWVSYPEMATLAGATPV---ILPTSISENFLLRPELLASKINEKSRLLILCSPSNPTGS 229
P + Y LAGA P +LP E L +A + + +++ +P+NP G+
Sbjct: 167 PGFAPYEAACELAGAEPRFYDLLPRRGWEADLAGVRAMA---DGATAAIVVINPNNPCGA 223
Query: 230 VYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASLPGMWDRTLTVNGFSKA 289
VY + L +IA+ ++ + +++DE+Y H+++ +K A+ + +T+ SK
Sbjct: 224 VYSAQHLFQIAETARELG-IPIIADEVYAHMVFGGSKFVPMATFAHI-TPVITIGALSKK 281
Query: 290 FAMTGWRLGYLA------APKHFVAACGKIQSQFTSGASSISQKXXXXXXXXXXXXXEAV 343
F + GWRLG+LA A KH V ++ TSG +SI Q E
Sbjct: 282 FMLPGWRLGWLAFCDPNGALKH-VRNATEMLLNVTSGPASIVQ--AAVPKILSNEHNEFH 338
Query: 344 STMVKAFQERRDYLVKSFKELPGVKI-SEPQGAFYLFIDFSSYYGSEVEGFGTIKDSESL 402
+V + D L + ++ ++ S+P G+ ++ ++ ++ FG ++D
Sbjct: 339 RNVVNLLESAADALYRRVNQIEALQCYSKPHGSMFMMVEVNTSL-----LFG-VEDDMDF 392
Query: 403 CMFLLEKAQVALVPGDAFGDDKCIRMSYAAALSTLQTAMEKIK 445
L+++ V ++PG G IR+ + A S + A ++I+
Sbjct: 393 ARELIKEESVLVLPGSVIGLKNWIRIFFGAPTSVILEACDRIE 435
>Os02g0302400 Similar to Tyrosine aminotransferase-like protein
Length = 430
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 150/351 (42%), Gaps = 34/351 (9%)
Query: 111 YTRYTPNAGTLELRKAICNKLQEENGISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLI 170
Y Y+P G A+ L E + SP V+++ G + + + SPG VL+
Sbjct: 85 YNYYSPAVGIAPACSAVAAHLSRELPYAVSPADVVLTAGCNHAVEIMMSVLASPGANVLL 144
Query: 171 PAPYWVSYPEMATLAGATPV---ILPTSISENFLLRPELLASKINEKSRLLILCSPSNPT 227
P P + Y A L+G +LP S E L E LA + + +++ +P+NP
Sbjct: 145 PRPGYPLYASRAALSGLEFRHFDLLPDSEWEVDLAGVEALA---DANTVAMVIVNPNNPC 201
Query: 228 GSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASLPGMWDRTLTVNGFS 287
G VY ++ L +IA+ +K ++V+SDE+Y+H + G +T+ G S
Sbjct: 202 GCVYSRDHLAKIAETARKL-GIMVISDEVYDHFAFGSKPFVPMGVF-GDVAPVMTLGGIS 259
Query: 288 KAFAMTGWRLGYLAA--PKHFVAACGKIQSQFTSGASSISQKXXXXXXXXXXXXXEAVST 345
K + + GWRLG++AA P + I S A S+ + ++
Sbjct: 260 KRWMVPGWRLGWIAATDPNGILRNKKIIDSVIDYRAISVDP-----VTFVQGALPDILAK 314
Query: 346 MVKAFQERRDYLVKSFKELPGVKISE---------PQGAFYLF--IDFSSYYGSEVEGFG 394
AF +VK E+ K+ E P+G+ ++ +D SS G
Sbjct: 315 TDDAFFTNALGVVKKAAEICYEKLKEIDCITCPHKPEGSMFVMAKLDLSSLDG------- 367
Query: 395 TIKDSESLCMFLLEKAQVALVPGDAFGDDKCIRMSYAAALSTLQTAMEKIK 445
I+D C L ++ V + PG G +R+++A L+ +E+ K
Sbjct: 368 -IEDDVDFCSKLAKEESVVICPGSGLGMKNWLRITFAVDPQLLEDGLERTK 417
>Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 542
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 24/325 (7%)
Query: 110 GYTRYTPNAGTLELRKAICNKLQE--ENGISYSPDQVLVSNGAKQCITQAVLAVCSPGDE 167
G Y P G L L+ A+ +++ + +S+ P QV++++GA + + PG+
Sbjct: 188 GLAAYQPYDGILALKMALAGFMRQIMQGSVSFEPSQVVITSGATPAMEILSFCLADPGNA 247
Query: 168 VLIPAPYWVSYP-EMATLAGATPVILPTSISENFLLRPELLASKINE------KSRLLIL 220
L+P+PY+ + ++ G + +P ++NF + L N+ K R +++
Sbjct: 248 FLVPSPYYPGWDRDIKWRTGIELIPVPCRSTDNFNISITALEIAYNQAKKRGIKVRGVLI 307
Query: 221 CSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASLPGMWD-- 278
+P+NPTGS PK+ L ++ + + + ++SDE++ Y K S A + +
Sbjct: 308 SNPNNPTGSFVPKQTLHDLLEFAAE-KNIHLISDEVFAGSTYGSGKFVSVAEVVDDLEDF 366
Query: 279 ---RTLTVNGFSKAFAMTGWRLGYL-AAPKHFVAACGKIQSQFTSGASSISQKXXXXXXX 334
R + G SK ++ G+R+G + + + V A KI ++F+S S+ +Q+
Sbjct: 367 DKGRVHIIYGLSKDLSLAGFRVGVIYSYNESIVTAAAKI-ARFSS-VSTPTQRLLVAMLS 424
Query: 335 XXXXXXEAVSTMVKAFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFSSYYGSEVEGFG 394
+ + + ++ V + ++ G++ + G FY + D S + S E
Sbjct: 425 DQKFISDYLKVNRERLRKMYHLFVDALDQV-GIECYKSSGGFYCWADMSKFIRSYSE--- 480
Query: 395 TIKDSESLCMFLLEKAQVALVPGDA 419
K L LLE+A+V + PG +
Sbjct: 481 --KGERKLWDRLLEEAKVNVTPGSS 503
>Os03g0195100 Similar to Plastid aminotransferase (Fragment)
Length = 440
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 34/325 (10%)
Query: 83 VIGLAAGEPDFDTPHVIAEAGMN-----AIKDGYTRYTPNAGTLELRKAICNKLQEENGI 137
VI L G+ P ++ A + +GY Y P G LRK I +K+ + GI
Sbjct: 68 VISLGIGDTTEPIPSIVTSAMAEYALALSTPEGYQGYGPEQGHKNLRKEIADKVYPDMGI 127
Query: 138 SYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATP-------- 189
S +V +S+GA QC + + P + + P + Y + + G T
Sbjct: 128 KES--EVFISDGA-QCDIARLQTLFGPNVTIAVQDPTFPGYVDNGVIMGQTGKADDGGRY 184
Query: 190 --VILPTSISENFLLRPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYP 247
+ EN P+L S++ ++ ++ CSP+NPTG +E L ++ ++ ++
Sbjct: 185 AGIEYMRCAPENAFF-PDL--SRV-RRTDVIFFCSPNNPTGHAASREQLRQLVELARRNG 240
Query: 248 RLLVLSDEIYEHIIYQPAKHT--SFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKH 305
++V +I + T S +PG + + V+ FSK TG RLG+ P
Sbjct: 241 SIIVFDSAYSSYISSSSSSSTPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWAVVPDE 300
Query: 306 FVAACG--------KIQSQFTSGASSISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYL 357
+ + G ++ +GAS I+Q AV+ +V ++E L
Sbjct: 301 LLYSDGVPVARDFDRVVCTCFNGASGIAQAGGVACLSTEEGRG-AVARVVGVYRENARVL 359
Query: 358 VKSFKELPGVKISEPQGAFYLFIDF 382
V++F+ L G ++ A Y+++ F
Sbjct: 360 VETFRSL-GKEVHGGGDAPYVWVRF 383
>Os05g0196600
Length = 437
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 144/352 (40%), Gaps = 31/352 (8%)
Query: 119 GTLELRKAICNKLQEENG--ISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWV 176
G RKA+ + ++ G + PD+V+++ GA + PGD +L+P PY+
Sbjct: 77 GLKSFRKAMASFMETIRGGKARFDPDRVVLTAGATAANELLTFILADPGDALLVPTPYYP 136
Query: 177 SYP-EMATLAGATPVILPTSISENFLLRPELLASKINE------KSRLLILCSPSNPTGS 229
+ ++ G V + + F + L + +E + R +++ +PSNP G+
Sbjct: 137 GFDRDLRWRTGVNIVPVSCDSAAGFQVTAGALRAAYDEAVAAGTRVRGVLITNPSNPLGT 196
Query: 230 VYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASL--------PGMWD--- 278
+ +LE I D V ++ + ++SDEIY ++ S A L G D
Sbjct: 197 TAARGVLEGILDFVARHD-MHLISDEIYSGSVFAAPDLVSVAELVDERRRARGGAADAED 255
Query: 279 ---RTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKXXXXXXXX 335
R V SK + G+R+G + + V A + S FT SS +Q+
Sbjct: 256 IARRVHVVYSLSKDLGLPGFRVGVVYSYNDAVVAAARRMSSFTL-VSSQTQRTLAAMLSD 314
Query: 336 XXXXXEAVSTMVKAFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFSSYYGSEVEGFGT 395
V + +ER V + + ++++D G +G T
Sbjct: 315 AAFAAAYVRSNRDRLRERHARAVAGLRRAGVACLRGANAGLFVWVDMRRLLG---DGEAT 371
Query: 396 IKDSESLCMFLLEKAQVALVPGDAFG--DDKCIRMSYA-AALSTLQTAMEKI 444
+ L ++ +A++ + PG + + R+ +A +L TL A+ ++
Sbjct: 372 VAGELRLWRRVVAEAKLNISPGSSCHCREPGWFRVCFANMSLETLDVALHRL 423
>Os01g0192900 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 461
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 28/274 (10%)
Query: 80 GVPVIGLAAGEPDFDTPHVIAE-----AGMNAIKDGYTRYTPNA------GTLELRKAIC 128
GV +GLA + FD AG + G + NA G RKA+
Sbjct: 53 GVIQMGLAENQVSFDLLEAYLRDHPEAAGWSTGGAGAGSFRDNALFQDYHGLKSFRKAMA 112
Query: 129 NKLQEENG--ISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYP-EMATLA 185
+ + + G + PD ++++ GA + +PGD +LIP PY+ + ++
Sbjct: 113 SFMGKIRGGKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRT 172
Query: 186 GATPVILPTSISENFLLRPELLASKINE------KSRLLILCSPSNPTGSVYPKELLEEI 239
G V + + F + L + +E ++R +++ +PSNP G+ +++L++I
Sbjct: 173 GVNIVPVRCDSANGFQVTVAALQAAYDEAAAVGMRARAVLITNPSNPLGTTVRRKMLDDI 232
Query: 240 ADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASL------PGMWDRTLTVNGFSKAFAMT 293
D V + + ++SDEIY ++ S A L G+ R V SK +
Sbjct: 233 LDFVSRND-IHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLP 291
Query: 294 GWRLGYLAAPKHFVAACGKIQSQFTSGASSISQK 327
G+R+G + + V + S FT SS +QK
Sbjct: 292 GFRVGVVYSYNDAVVTAARRMSSFTL-VSSQTQK 324
>Os03g0299900 Similar to Plastid aminotransferase (Fragment)
Length = 464
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 146/355 (41%), Gaps = 50/355 (14%)
Query: 83 VIGLAAGE-----PDFDTPHVIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGI 137
+I L G+ PD T + A + DGY+ Y G +LR AI + GI
Sbjct: 96 IISLGIGDTTEPIPDVITNAMAKRAHALSTVDGYSGYGAEQGEKKLRAAIAATYYADLGI 155
Query: 138 SYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYPEMATLAGATPVI------ 191
+ + VS+GAK C + + ++ + P + +Y + + + G T +
Sbjct: 156 EET--DIFVSDGAK-CDISRLQVLFGSNVKIAVQDPSYPAYVDSSVIMGQTGLYQEDVQK 212
Query: 192 ------LPTSISENFLLRPELLASKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKK 245
+ S F P+L + ++ ++ CSP+NPTG+ ++ L ++ K
Sbjct: 213 YGNIEYMKCSPENGFF--PDLSSV---PRTDIIFFCSPNNPTGAAASRDQLTKLVKFAKD 267
Query: 246 YPRLLVLSDEIYEHIIYQPAKHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKH 305
++V D Y I + + F +PG + + FSK TG RLG+ PK
Sbjct: 268 NGSIIVY-DSAYAMYISDDSPKSIF-EIPGAKEVAIETASFSKYAGFTGVRLGWTVVPKE 325
Query: 306 FVAACG--------KIQSQFTSGASSISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYL 357
+ + G +I +GAS+ISQ +A+S +V ++E +
Sbjct: 326 LLFSDGHPVAKDFNRIVCTCFNGASNISQ--AGGLGCLSPEGLKAMSDVVGFYKENTKII 383
Query: 358 VKSFKELPGVKISEPQGAFYLFIDFSSYYGSEVEGFGTIKDSESLCMFLLEKAQV 412
V +F L G + + A Y+++ F ++S + +LEKA V
Sbjct: 384 VDTFTSL-GFNVYGAKNAPYVWVHFPG------------RNSWDVFAEILEKAHV 425
>Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (EC 4.4.1.14) (ACC
synthase 1) (S-adenosyl-L-methionine
methylthioadenosine-lyase 1)
Length = 487
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 137/335 (40%), Gaps = 33/335 (9%)
Query: 79 AGVPVIGLAAGEPDFD--------TPHVIA---EAGMNAIKDGYTRYTPNAGTLELRKAI 127
+G+ +GLA + FD PH + E G ++ + G + A+
Sbjct: 48 SGIIQMGLAENQLSFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNAL 107
Query: 128 CNKLQEENG--ISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWVSYP-EMATL 184
+ E+ G + + P ++++ GA + + GD LIP PY+ + ++
Sbjct: 108 ARFMSEQRGYKVVFDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWR 167
Query: 185 AGATPVILPTSISENF-LLRPEL-LASKINEKSRL----LILCSPSNPTGSVYPKELLEE 238
GA V + + + F + RP L A + +K RL +++ +PSNP G+ P+ LE
Sbjct: 168 TGAEIVPVHCASANGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLET 227
Query: 239 IADIVKKYPRLLVLSDEIYEHIIYQ--PAKHTS----FASLPG----MWDRTLTVNGFSK 288
I D V + ++SDEIY + PA S A G + DR V SK
Sbjct: 228 IVDFVAA-KGIHLISDEIYAGTAFAEPPAGFVSALEVVAGRDGGGADVSDRVHVVYSLSK 286
Query: 289 AFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKXXXXXXXXXXXXXEAVSTMVK 348
+ G+R+G + + V + S F SS +Q V+ +
Sbjct: 287 DLGLPGFRVGAIYSANAAVVSAATKMSSFGL-VSSQTQYLLAALLGDRDFTRSYVAENKR 345
Query: 349 AFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFS 383
+ER D LV +E+ G+ + ++D S
Sbjct: 346 RIKERHDQLVDGLREI-GIGCLPSNAGLFCWVDMS 379
>Os05g0319200
Length = 496
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 150/379 (39%), Gaps = 34/379 (8%)
Query: 98 VIAEAGMNAIKDGYTRYTPNAGTLELRKAICNKLQEENG--ISYSPDQVLVSNGAKQCIT 155
V + G ++ +D + G RKA+ +++ G ++ PD+++++ GA
Sbjct: 85 VAGDGGGDSFRDN-ALFQDYHGLANFRKAMARFMEKIMGGKATFDPDRIVLTAGATAANE 143
Query: 156 QAVLAVCSPGDEVLIPAPYWVSYP-EMATLAGATPVILPTSISENFLLRPELL------A 208
+ P D +LIP PY+ + ++ G V + + F + L A
Sbjct: 144 LLTFILADPRDALLIPTPYYPGFDRDLRWRTGVNVVPVHCDSANGFQVTAAALQAAHDEA 203
Query: 209 SKINEKSRLLILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHT 268
+ + R +++ +PSNP G+ +E LE I V + LV SDEIY ++
Sbjct: 204 AAAGMRVRGVLITNPSNPLGTTARREALEGILGFVARNDIHLV-SDEIYSGSVFAAPDLV 262
Query: 269 SFASL------------------PGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAAC 310
S A L G+ DR V SK + G+R+G + + V A
Sbjct: 263 SVAELVESSSSRARHRGEDDDGDVGVADRVHVVYSLSKDLGLPGFRVGVVYSRNDAVVAA 322
Query: 311 GKIQSQFTSGASSISQKXXXXXXXXXXXXXEAVSTMVKAFQERRDYLVKSFKELPGVKIS 370
+ S FT SS +Q+ V+ +ER D++V GV
Sbjct: 323 ARRMSSFTL-VSSQTQRTLAAVLSDEAFVDAYVAANRARLRERHDHVVAGLAR-AGVPCL 380
Query: 371 EPQGAFYLFIDFSSYYGSEVEGFGTIKDSESLCMFLLEKAQVALVPGDA--FGDDKCIRM 428
++++D + T L LL + ++ + PG + + R+
Sbjct: 381 RGNAGLFVWMDMRRLLLGDGGDAATFAGELRLWDRLLREVKLNVSPGSSCHCSEPGWFRV 440
Query: 429 SYA-AALSTLQTAMEKIKE 446
+A +L+TL A+E+I
Sbjct: 441 CFANMSLATLDVALERISR 459
>Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 483
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 119 GTLELRKAICNKLQEENG--ISYSPDQVLVSNGAKQCITQAVLAVC--SPGDEVLIPAPY 174
G E RKA+ + + G ++ PD+V++S GA Q LA C +PG+ L+P PY
Sbjct: 92 GLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGATG--AQETLAFCLANPGEAFLVPTPY 149
Query: 175 WVSYP-EMATLAGATPVILPTSISENFLLRPELLASKINEKSRL------LILCSPSNPT 227
+ ++ + +G + + +F L E L S + R +++ +PSNP
Sbjct: 150 YPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSAYDGARRQGISVKGILITNPSNPL 209
Query: 228 GSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASLPGM---W---DRTL 281
G++ ++ L +A ++ R+ ++ DEIY ++ ++ S A + W D
Sbjct: 210 GTITDRDTLAMLATFATEH-RVHLVCDEIYAGSVFATPEYVSIAEVIERDVPWCNRDLIH 268
Query: 282 TVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQF 317
V SK F + G+R+G + + V A + S F
Sbjct: 269 VVYSLSKDFGLPGFRVGIIYSYNDAVVAAARRMSSF 304
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,449,875
Number of extensions: 543269
Number of successful extensions: 1312
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1289
Number of HSP's successfully gapped: 16
Length of query: 458
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 354
Effective length of database: 11,605,545
Effective search space: 4108362930
Effective search space used: 4108362930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)