Os01g0871300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 1-aminocyclopropane-1-carboxylate synthase family protein.
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Os01g0871300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 1-aminocyclopropane-1-carboxylate synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.53 | 0.324 | 10.1 | -0.39 | 0.857 | -0.523 | 0.493 | -0.998 | -0.0587 | 10.3 | 69 | 1187 | -- | -- |
| 49.33 | 0.327 | 10.1 | -0.505 | 0.866 | -0.569 | 0.268 | -- | -0.0766 | 10.2 | 69.69 | 1184 | -- | -- |
| 48.42 | 0.324 | 10.1 | -0.394 | 0.85 | -0.522 | -- | -0.809 | -0.0616 | 10.2 | 69.06 | 1194 | -- | -- |
| 49.58 | 0.328 | 10.1 | -0.459 | 0.871 | -0.532 | -- | -- | -0.0903 | 10.2 | 72 | 1186 | -- | -- |
| 81.84 | 0.421 | 10.2 | -0.281 | -- | -0.653 | -- | -1.04 | -0.117 | -- | 75 | 3002 | -- | -- |
| 61.07 | 0.366 | 10.1 | -0.386 | 0.734 | -- | 0.173 | -- | -0.0533 | 9.77 | -- | -- | -- | -- |
| 61.19 | 0.366 | 10.1 | -0.38 | 0.734 | -- | -- | -- | -0.0531 | 9.75 | -- | -- | -- | -- |
| 81.8 | 0.421 | 10.2 | -0.427 | -- | -0.732 | -- | -- | -0.157 | -- | 76 | 2964 | -- | -- |
| 54.5 | 0.344 | 10.1 | -- | 0.783 | -0.684 | -- | -- | -0.0814 | 10.1 | 75 | 2706 | -- | -- |
| 93.25 | 0.451 | 10.1 | -0.387 | -- | -- | -- | -- | -0.0524 | -- | -- | -- | -- | -- |
| 64.99 | 0.377 | 10.1 | -- | 0.735 | -- | -- | -- | -0.0108 | 9.79 | -- | -- | -- | -- |
| 86.62 | 0.433 | 10.2 | -- | -- | -0.701 | -- | -- | -0.104 | -- | 76 | 2967 | -- | -- |
| 97.2 | 0.46 | 10.1 | -- | -- | -- | -- | -- | -0.00941 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 2 | 47.30 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 4 | 47.46 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 11 | 48.17 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 16 | 48.32 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 20 | 48.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 21 | 48.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 24 | 48.60 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 25 | 48.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 27 | 48.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 28 | 48.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 29 | 48.64 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 39 | 48.70 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 40 | 48.72 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 53 | 48.77 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 82 | 48.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 85 | 48.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 86 | 48.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 88 | 48.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 15 |
| 100 | 48.87 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 102 | 48.88 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 114 | 48.89 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 129 | 48.90 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 135 | 48.93 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 138 | 48.93 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 141 | 48.94 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 143 | 48.94 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 152 | 48.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 212 | 49.03 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 217 | 49.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 221 | 49.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 224 | 49.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 239 | 49.05 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 263 | 49.09 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 265 | 49.09 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 267 | 49.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 268 | 49.10 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 269 | 49.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 272 | 49.10 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 279 | 49.11 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 285 | 49.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 288 | 49.12 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 295 | 49.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 296 | 49.14 | humidity | 60.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 333 | 49.19 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 338 | 49.20 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 346 | 49.21 | humidity | 60.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 351 | 49.21 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 363 | 49.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 377 | 49.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 381 | 49.23 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 391 | 49.25 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 396 | 49.26 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 418 | 49.28 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 475 | 49.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 516 | 49.35 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 525 | 49.35 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 527 | 49.35 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 539 | 49.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 543 | 49.37 | wind | 3.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 545 | 49.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 559 | 49.38 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 561 | 49.38 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 654 | 49.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 655 | 49.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 656 | 49.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 659 | 49.45 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 664 | 49.46 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 666 | 49.46 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 670 | 49.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 675 | 49.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 687 | 49.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 739 | 49.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 746 | 49.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 763 | 49.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 790 | 49.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 795 | 49.54 | humidity | 70.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 802 | 49.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 10 |
| 803 | 49.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 821 | 49.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 822 | 49.55 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 833 | 49.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 835 | 49.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 847 | 49.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 21 |
| 864 | 49.57 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 867 | 49.57 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 892 | 49.57 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 901 | 49.58 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 924 | 49.59 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 931 | 49.59 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 947 | 49.59 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 18 |