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Os02g0302400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Tyrosine aminotransferase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0199) R2 : 0.807
β1 : 1.02 (0.0732) R2dD : 0.0865 R2D : 0.1
β2 : 1.85 (0.0483) R2dC : 0.623 R2C : 0.631
β3 : -- (--) R2dE : -- R2E : --
β4 : -2.52 (0.19) R2dD*C : 0.0758 R2D*C : 0.0991
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0857 (0.0425) R2dN8 : 0.00231 R2N8 : -0.00692
σ : 0.375
deviance : 63.88
__
_____
C
peak time of C : 22
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.86 0.36 12.1 0.941 1.85 2.88 -2.7 11.8 0.0965 22 8.7 175 -- --
63.83 0.375 12.2 1.03 1.85 -0.119 -2.52 -- 0.0883 22 8.7 175 -- --
84.95 0.429 12.1 1.02 1.85 2.54 -- 12.1 0.111 22.1 8.476 488 -- --
88.3 0.438 12.2 1.14 1.85 -0.24 -- -- 0.0967 22.1 8.6 331 -- --
289.8 0.793 12 1.16 -- 2.07 -- 13.3 0.174 -- 8.9 568 -- --
63.88 0.375 12.2 1.02 1.85 -- -2.52 -- 0.0857 22 -- -- -- --
88.54 0.441 12.2 1.12 1.85 -- -- -- 0.0895 22.1 -- -- -- --
216.51 0.685 12.2 1.8 -- -1.4 -- -- -0.11 -- 3.301 695 -- --
119.34 0.509 12.2 -- 1.85 0.693 -- -- -0.0583 22 7.966 139 -- --
296.22 0.804 12.1 1.14 -- -- -- -- 0.0917 -- -- -- -- --
121.5 0.516 12.2 -- 1.86 -- -- -- -0.0351 22.1 -- -- -- --
269.33 0.764 12.2 -- -- -1.39 -- -- -0.121 -- 3.499 699 -- --
330.67 0.849 12.2 -- -- -- -- -- -0.035 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.29 humidity 50.0 720 > th dose dependent rect. 7 4
3 57.64 temperature 20.0 90 > th dose independent rect. 5 10
16 58.27 temperature 15.0 720 > th dose independent rect. 1 6
18 58.30 temperature 15.0 720 > th dose independent rect. 19 18
19 58.41 temperature 20.0 30 > th dose independent rect. 20 19
22 58.46 temperature 15.0 720 > th dose independent rect. 1 14
24 58.51 atmosphere 1015.0 720 < th dose independent rect. 1 6
25 58.51 humidity 90.0 30 < th dose independent rect. 6 9
26 58.53 temperature 15.0 720 > th dose independent rect. 19 12
29 58.56 temperature 15.0 720 > th dose independent rect. 19 20
34 58.66 atmosphere 1015.0 720 < th dose independent rect. 19 12
35 58.66 humidity 80.0 90 > th dose dependent rect. 7 10
38 58.67 temperature 20.0 30 > th dose independent rect. 5 21
39 58.67 radiation 30.0 10 < th dose dependent rect. 7 23
40 58.68 temperature 15.0 720 > th dose independent rect. 3 10
56 58.81 wind 7.0 90 > th dose dependent sin 10 NA
59 58.82 atmosphere 1015.0 720 < th dose independent rect. 1 14
61 58.84 wind 9.0 90 < th dose independent sin 3 NA
69 58.86 temperature 15.0 720 > th dose independent rect. 9 6
70 58.87 wind 7.0 90 > th dose dependent rect. 11 17
76 58.88 wind 7.0 90 > th dose dependent rect. 11 15
86 58.93 temperature 15.0 270 > th dose independent rect. 9 13
89 58.95 temperature 15.0 720 > th dose independent rect. 1 22
91 58.96 atmosphere 1015.0 720 < th dose independent rect. 11 20
92 58.96 humidity 50.0 90 > th dose dependent rect. 7 12
107 59.02 wind 7.0 30 < th dose independent rect. 23 23
113 59.05 temperature 15.0 720 > th dose independent rect. 3 18
114 59.06 radiation 30.0 720 < th dose independent rect. 7 2
116 59.07 wind 7.0 90 > th dose dependent rect. 11 11
122 59.09 temperature 15.0 720 > th dose independent rect. 22 9
126 59.09 wind 7.0 270 > th dose dependent rect. 17 22
127 59.10 temperature 20.0 90 > th dose independent rect. 5 18
130 59.11 atmosphere 1005.0 270 > th dose dependent rect. 23 4
131 59.12 wind 7.0 270 > th dose independent sin 9 NA
133 59.12 wind 7.0 90 > th dose dependent rect. 14 22
137 59.14 wind 7.0 90 > th dose dependent sin 19 NA
138 59.14 radiation 40.0 720 < th dose dependent rect. 7 2
143 59.15 humidity 90.0 4320 < th dose independent rect. 2 2
145 59.15 wind 7.0 90 > th dose dependent rect. 11 8
150 59.16 humidity 70.0 720 > th dose independent rect. 7 4
151 59.16 wind 7.0 270 > th dose dependent rect. 19 22
155 59.17 wind 7.0 270 > th dose dependent rect. 19 20
175 59.19 humidity 80.0 90 > th dose dependent rect. 7 12
177 59.20 wind 7.0 270 > th dose independent rect. 19 20
179 59.20 temperature 15.0 14400 < th dose dependent rect. 11 5
181 59.20 wind 7.0 270 > th dose dependent rect. 20 15
202 59.21 wind 7.0 90 > th dose dependent rect. 24 22
207 59.21 radiation 10.0 30 < th dose dependent rect. 23 23
208 59.22 temperature 15.0 720 > th dose independent sin 7 NA
209 59.22 temperature 20.0 90 > th dose independent sin 1 NA
212 59.22 wind 9.0 90 > th dose independent rect. 11 15
219 59.22 wind 7.0 90 > th dose independent rect. 15 21
223 59.22 wind 7.0 90 > th dose dependent no NA NA
249 59.23 wind 7.0 270 > th dose independent rect. 17 22
253 59.23 atmosphere 1000.0 90 > th dose dependent rect. 23 6
271 59.24 radiation 30.0 4320 < th dose independent rect. 24 7
272 59.24 wind 9.0 90 > th dose independent rect. 11 12
282 59.25 wind 9.0 90 > th dose independent rect. 11 8
288 59.25 wind 7.0 270 > th dose dependent rect. 17 18
293 59.26 temperature 15.0 14400 < th dose independent rect. 12 12
294 59.26 temperature 15.0 14400 < th dose dependent rect. 20 2
299 59.27 wind 9.0 90 > th dose independent sin 19 NA
300 59.27 wind 7.0 270 < th dose independent sin 5 NA
316 59.28 wind 7.0 90 > th dose dependent rect. 24 19
328 59.29 temperature 15.0 14400 < th dose independent rect. 14 10
365 59.30 temperature 15.0 14400 < th dose dependent rect. 10 9
366 59.30 temperature 15.0 14400 < th dose dependent rect. 10 12
401 59.32 humidity 90.0 90 > th dose independent rect. 7 9
438 59.33 wind 3.0 720 > th dose independent rect. 5 6
441 59.33 temperature 15.0 720 > th dose independent rect. 21 13
449 59.33 temperature 15.0 14400 < th dose dependent rect. 12 1
469 59.35 temperature 15.0 14400 > th dose independent rect. 15 8
478 59.36 wind 7.0 720 < th dose independent sin 8 NA
480 59.36 temperature 15.0 14400 < th dose independent rect. 19 3
483 59.36 temperature 15.0 720 > th dose independent rect. 19 22
484 59.36 temperature 10.0 43200 < th dose dependent rect. 23 1
528 59.37 temperature 15.0 14400 < th dose dependent rect. 15 1
533 59.38 precipitation 0.1 720 < th dose independent sin 7 NA
542 59.38 precipitation 0.1 720 < th dose dependent sin 7 NA
555 59.39 wind 3.0 720 > th dose independent rect. 7 4
563 59.39 temperature 15.0 14400 > th dose independent rect. 8 13
572 59.39 atmosphere 1005.0 10 > th dose dependent rect. 24 6
620 59.40 humidity 50.0 720 > th dose dependent rect. 23 13
625 59.40 wind 1.0 10 > th dose dependent rect. 11 15
645 59.41 temperature 20.0 270 < th dose independent rect. 9 1
650 59.41 temperature 15.0 14400 > th dose independent rect. 11 11
652 59.41 temperature 15.0 14400 < th dose independent rect. 9 12
654 59.41 humidity 50.0 14400 > th dose independent rect. 18 13
655 59.41 wind 7.0 270 > th dose independent rect. 20 15
680 59.42 temperature 15.0 14400 < th dose independent sin 20 NA
691 59.42 atmosphere 1010.0 90 < th dose independent rect. 20 18
738 59.44 temperature 15.0 14400 < th dose independent rect. 5 16
743 59.44 temperature 20.0 90 < th dose dependent sin 4 NA
814 59.46 radiation 30.0 90 < th dose dependent rect. 7 22
818 59.47 wind 3.0 720 > th dose independent rect. 8 1
819 59.47 temperature 10.0 43200 < th dose independent rect. 22 1
844 59.47 precipitation 0.1 720 < th dose independent rect. 9 23
920 59.47 precipitation 0.1 720 < th dose dependent rect. 9 23
921 59.48 wind 9.0 270 < th dose independent no NA NA
922 59.48 temperature 15.0 14400 > th dose independent sin 20 NA
935 59.48 temperature 15.0 720 > th dose independent rect. 13 22