BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0788800 Os01g0788800|AF317882
(709 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0788800 Homeodomain-like containing protein 1439 0.0
Os04g0627000 Similar to Roc1 330 2e-90
Os04g0569100 Similar to OCL1 homeobox protein 267 2e-71
Os02g0674800 Similar to OCL1 homeobox protein 224 2e-58
Os08g0292000 Homeobox domain containing protein 151 2e-36
Os10g0575600 Homeodomain-related containing protein 150 3e-36
Os08g0136100 Similar to Roc1 101 2e-21
Os08g0187500 Similar to Roc1 97 5e-20
Os09g0526300 Similar to Homeobox protein GLABRA2 (Homeobox-... 86 7e-17
Os06g0208100 Similar to Homeodomain protein HOX3 83 9e-16
Os09g0526200 Similar to OCL3 protein 75 1e-13
Os10g0480200 Similar to Rolled leaf1 75 2e-13
Os01g0760800 Similar to Homeodomain protein 1 72 2e-12
Os07g0426600 69 1e-11
>Os01g0788800 Homeodomain-like containing protein
Length = 709
Score = 1439 bits (3724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/709 (97%), Positives = 689/709 (97%)
Query: 1 MEMNQQHNEGNESFVALMNGFAGDGTATLPNDGEQRMSIPARELFAAIEADSGLLPVNSS 60
MEMNQQHNEGNESFVALMNGFAGDGTATLPNDGEQRMSIPARELFAAIEADSGLLPVNSS
Sbjct: 1 MEMNQQHNEGNESFVALMNGFAGDGTATLPNDGEQRMSIPARELFAAIEADSGLLPVNSS 60
Query: 61 NTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQ 120
NTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQ
Sbjct: 61 NTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQ 120
Query: 121 VKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSE 180
VKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSE
Sbjct: 121 VKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSE 180
Query: 181 WLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHVAL 240
WLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHVAL
Sbjct: 181 WLQQEIARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHVAL 240
Query: 241 WFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNY 300
WFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNY
Sbjct: 241 WFPVPGCSYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNY 300
Query: 301 RTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEG 360
RTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEG
Sbjct: 301 RTFFPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEG 360
Query: 361 LVVVIDVSLDDGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCMNG 420
LVVVIDVSLDDGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCMNG
Sbjct: 361 LVVVIDVSLDDGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCMNG 420
Query: 421 LVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRKNLMKLADDLLASFXXXXXXXXXX 480
LVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRKNLMKLADDLLASF
Sbjct: 421 LVFGARRWVATMARQSARMRDVHHNKTAPQVSTKGRKNLMKLADDLLASFAGGIAATGGG 480
Query: 481 XXXXXXXXXXEKDIRVAYRRTTEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKW 540
EKDIRVAYRRTTEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKW
Sbjct: 481 TWTVVIGAGTEKDIRVAYRRTTEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKW 540
Query: 541 DVLVHGSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQ 600
DVLVHGSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQ
Sbjct: 541 DVLVHGSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQ 600
Query: 601 IDSELMNTMVLSPSDLPPGRGGPSLYPTGFSLLPDVEAAQDSSGIALGEVGGTLMTMGFQ 660
IDSELMNTMVLSPSDLPPGRGGPSLYPTGFSLLPDVEAAQDSSGIALGEVGGTLMTMGFQ
Sbjct: 601 IDSELMNTMVLSPSDLPPGRGGPSLYPTGFSLLPDVEAAQDSSGIALGEVGGTLMTMGFQ 660
Query: 661 IPVKLASGDRMYSRSAASAIRLMTDTIALVKKTLMNEHSGIYGVSPFHP 709
IPVKLASGDRMYSRSAASAIRLMTDTIALVKKTLMNEHSGIYGVSPFHP
Sbjct: 661 IPVKLASGDRMYSRSAASAIRLMTDTIALVKKTLMNEHSGIYGVSPFHP 709
>Os04g0627000 Similar to Roc1
Length = 784
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 229/697 (32%), Positives = 347/697 (49%), Gaps = 66/697 (9%)
Query: 57 VNSSNTNEK-RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQ 115
V+ + N++ RK+R R T Q + +E FF C HPDD Q++ LS GL QVKFWFQ
Sbjct: 94 VDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 153
Query: 116 NKRTQVKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERL 175
NKRTQ+K + EN +L +NE LR EN R K A +A C C + +++ + L
Sbjct: 154 NKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHL 213
Query: 176 MGQSEWLQQEIAR-------------------SNGTPPAANLAFQLNSSADYVFSG---- 212
++ L++EI R SN AA+ A A Y G
Sbjct: 214 RIENARLREEIDRISAIAAKYVGKPMVPFPVLSNPMAAAASRAPLDLPVAPYGVPGDMFG 273
Query: 213 -------------QHDQQMIAELAKNAMHALIILAESHVALWFPVP-----GCSYEVLNK 254
+ D+ MI ELA AM L+ +A+ LW P + E L++
Sbjct: 274 GGGAGELLRGVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSE 333
Query: 255 MAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTN 314
Y + +P G ++EA+R ++V+M + ++V+ LMD Y F ++S A+T
Sbjct: 334 EEYARMFPRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITL 393
Query: 315 RIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD--G 372
+ + + YNG +Q+M+VE PSPLVP R+ F+RYC +G V+DVSLD
Sbjct: 394 EVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRP 453
Query: 373 SIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCMN-GLVFGARRWVAT 431
S KCR+ PSG LIQ + KVT +EHV DD VH +Y+ +N GL FGARRWV T
Sbjct: 454 SPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGT 513
Query: 432 MARQSARMRDVHHNKTAPQ-----VSTKGRKNLMKLADDLLASFXXXXXXXXXXXXXXXX 486
+ RQ R+ V + S++GRK+++KLA+ ++ SF
Sbjct: 514 LDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLS 573
Query: 487 XXXXEKDIRVAYRRTTEGSSSYNAI-LSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVH 545
E D+RV R++ + I L+ S LP+P ++ FD LR+ + R +WD+L +
Sbjct: 574 GSGAE-DVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSN 632
Query: 546 GSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSEL 605
G +V+E IA G + V++L + ++ +ILQ + DASGS+++Y+ +D
Sbjct: 633 GGIVQEMAHIANGRDQGNCVSLLRVNSS-NSNQSNMLILQESCTDASGSYVIYAPVDVVA 691
Query: 606 MNTMVLSPSDLPPGRGGP---SLYPTGFSLLPDVEA--AQDSSGIALGEVGGTLMTMGFQ 660
MN ++ G P +L P+GF++LPD A D G GG+L+T+ FQ
Sbjct: 692 MNVVL--------NGGDPDYVALLPSGFAILPDGPAHDGGDGDGGVGVGSGGSLLTVAFQ 743
Query: 661 IPVKLASGDRMYSRSAASAIRLMTDTIALVKKTLMNE 697
I V ++ S A+ L+ T+ +K + E
Sbjct: 744 ILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGE 780
>Os04g0569100 Similar to OCL1 homeobox protein
Length = 806
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 211/715 (29%), Positives = 341/715 (47%), Gaps = 100/715 (13%)
Query: 65 KRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTM 124
KRK+R R T +Q + LE F C HPD+ Q+ LS+ GL QVKFWFQN+RTQ+K
Sbjct: 103 KRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQ 162
Query: 125 CWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSV-------QNQLAVEMERLMG 177
+ EN L EN+ LR EN ++ A AVC+ C ++ ++ L VE RL
Sbjct: 163 LERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKD 222
Query: 178 Q--------SEWLQQEIA----------------------RSNGTPPAANL--------A 199
+ +++L + I+ G+ P+A + A
Sbjct: 223 ELSRVCALAAKFLGKSISVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTITDFA 282
Query: 200 FQLNSSADYVFSGQH-----------DQQMIAELAKNAMHALIILAESHVALWFP---VP 245
++SS V + D+ + ELA +AM L+ +A+ LW P VP
Sbjct: 283 GAMSSSMGTVITPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPGASVP 342
Query: 246 GC-SYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMD-YKSVVDFLMDPYNYRTF 303
+ E LN Y +P G+ +EA+R +V++D ++V+ LMD +
Sbjct: 343 SSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERRWSDM 402
Query: 304 FPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVV 363
F +I+ A T + + NG + LM E+ SPLVP R+ FLR+ L +G+
Sbjct: 403 FSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLADGVWA 462
Query: 364 VIDVSLD----DGSIFS-------KCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHE 412
V+DVS D D I S CR++PSG ++Q KVT +EH D+ VH
Sbjct: 463 VVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHP 522
Query: 413 LYQPCM-NGLVFGARRWVATMARQSARMRDVHHNKTAPQ-----VSTKGRKNLMKLADDL 466
LY+P + +GL GA RW+AT+ RQ + + + P+ + +G+++++KLA +
Sbjct: 523 LYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRM 582
Query: 467 LASFXXXXXXXXXXXXXXXXXXXXE--KDIRVAYRRTT-EGSSSYNAILSVTASLRLPLP 523
+F +D+ V R++ E + +LS S+ +P+
Sbjct: 583 TDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSVWMPVM 642
Query: 524 MRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTM- 582
+ F+ L N R +WD+L +G ++E +IA+G N +TV +L K + +D+ +M
Sbjct: 643 PERLFNFLHNKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLL--KASPTKDKQNSML 700
Query: 583 ILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGPSLYPTGFSLLPDVEAAQDS 642
ILQ DASGS +VY+ +D M+ +V+S D +L P+GF++LP
Sbjct: 701 ILQETCADASGSMVVYAPVDIPAMH-LVMSGGD----SSCVALLPSGFAILP-------- 747
Query: 643 SGIALG---EVGGTLMTMGFQIPVKLASGDRMYSRSAASAIRLMTDTIALVKKTL 694
+G ++G ++GG+L+T+ FQI ++ S + L++ TI +K L
Sbjct: 748 AGPSIGADHKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTAL 802
>Os02g0674800 Similar to OCL1 homeobox protein
Length = 804
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/516 (31%), Positives = 259/516 (50%), Gaps = 53/516 (10%)
Query: 212 GQHDQQMIAELAKNAMHALIILAESHVALWFP-VPGC-SYEVLNKMAYDQAYPGDNSANA 269
G D+ + ELA +AM L+ +A+ LW P +PG S EVLN Y ++
Sbjct: 305 GNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKP 364
Query: 270 IGFKTEATRAVSMVMMDYK-SVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGV 328
G+ +EA+R +V++D ++V+ LMD + F +I+ A + + NG
Sbjct: 365 AGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGA 424
Query: 329 IQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLD-------------DGSIF 375
+ LM E+ SPLVP R+ TFLR+C L EG V+DVS+D G++
Sbjct: 425 LLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNV- 483
Query: 376 SKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCM-NGLVFGARRWVATMAR 434
KCR++PSG ++Q CKVT +EH D+ VH+LY+P + +GL FGARRW+AT+ R
Sbjct: 484 -KCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQR 542
Query: 435 QSARMRDVHHNKT-----APQVSTKGRKNLMKLADDLLASFXXXXXXXXXXXXXXXXXXX 489
Q + + + T + +S +G+++++KLA + +F
Sbjct: 543 QCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGAT 602
Query: 490 XE--KDIRVAYRRT-TEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHG 546
+D+RV R++ +E +LS S+ +P+ K F+ LR+ R +WD+L +G
Sbjct: 603 GSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNG 662
Query: 547 SVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELM 606
++E IA+G + ++V++L A ++ +ILQ DASGS +VY+ +D M
Sbjct: 663 GPMQEMTQIAKGQRDGNSVSLLRAS-AVSANQSSMLILQETCTDASGSIVVYAPVDIPAM 721
Query: 607 NTMVLSPSDLPPGRGGPSLY----PTGFSLLPDVEAAQDSSGIALG----EVGGTLMTMG 658
++ GG S Y P+GF++LPD G +G E GG+L+T+
Sbjct: 722 QLVM---------NGGDSTYVALLPSGFAILPD--------GPRIGATGYETGGSLLTVA 764
Query: 659 FQIPVKLASGDRMYSRSAASAIRLMTDTIALVKKTL 694
FQI V ++ S + L++ TI +K L
Sbjct: 765 FQILVNNQPTAKLTVESVETVNNLISCTIKKIKTAL 800
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 76/128 (59%)
Query: 61 NTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQ 120
+ + KRK+R R T +Q + LE F C HPD+ Q+ LS L QVKFWFQN+RTQ
Sbjct: 93 SNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQ 152
Query: 121 VKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSE 180
+KT + EN L EN+ LR EN ++ A + +C +C + ++ ++++E + L ++
Sbjct: 153 MKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENA 212
Query: 181 WLQQEIAR 188
L+ E+ R
Sbjct: 213 RLKDELNR 220
>Os08g0292000 Homeobox domain containing protein
Length = 786
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 184/739 (24%), Positives = 297/739 (40%), Gaps = 124/739 (16%)
Query: 65 KRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTM 124
K+ RR Q LT +Q E L F C +PD + L++ + Q+K+WFQN RT++K
Sbjct: 60 KKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKF 119
Query: 125 CWKEENYKLSVENEILRDENRRVKIAHCTAVCLTC--------C-----------NSSVQ 165
EE L ENE L+ EN ++ + C C C N V
Sbjct: 120 KNNEERKLLQKENEELKKENAELRNRMKNSTCRACDLPLFHIDCRHWENPMLNKGNHGVT 179
Query: 166 NQL-------------------------AVEMERLMGQSEWLQQEIARSNGTPPAANLAF 200
+ L AV M S LQ A S AN
Sbjct: 180 SNLIPQAVSSLLPSSSGFVASGSNLSSNAVLMPVSAMPSSVLQPAPAVS-----GANFPI 234
Query: 201 QLNSSADYVFSGQHDQQMIAELAKNAMH----------ALIILAESHVALWFP-VPGCSY 249
N SA+ G ++ ++ +LA AM +L++ + + LW P +
Sbjct: 235 LHNLSAN-ANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGV 293
Query: 250 EVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVIS 309
E LN Y A + FK TR ++V +V L+D +R FP +++
Sbjct: 294 ESLNYQEY-LAKSRTIGQKPVDFKVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVA 352
Query: 310 GAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSL 369
A T +I + S+ ++G++QLM E+ SP VP TFLR GL V+DVS+
Sbjct: 353 SANTTKIISTGPSNLHDGLLQLMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSI 412
Query: 370 D----------DGSIFS--------KCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVH 411
D S+ + + R +PSG +I+ + KVT + H D+ V
Sbjct: 413 DTILPGESKTAQSSVQTSSTAARRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVP 472
Query: 412 ELYQPCM-NGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKG---RKNLMKLADDLL 467
LY + + GA RWVA++ R S + +H P + R+ ++ L +
Sbjct: 473 VLYHSLLRSAKALGACRWVASLQRHSQFLSGLHKYIFCPDSTMTEVVMRRKVLYLVKQMT 532
Query: 468 ASFXXXXXXXXXXXXXXXXXXXXEKDIRVAYRRTTEGSSSYNA--ILSVTASLRLP-LPM 524
+SF D A+ + G++ A +LS T ++ LP +
Sbjct: 533 SSFTGLFASMSKATLQDG------DDTHFAH-QIVGGATGEPAGLLLSATTTIWLPGVNP 585
Query: 525 RKTFDLLRNLTHRCKWDVL----------------VHGSVVKEEVTIARGVGNDDTVTVL 568
R +D LR+ +W L ++G V E + G+ ++++
Sbjct: 586 RHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGAPLNGETVPEFYRMVNGLHEGHAISLI 645
Query: 569 HCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMV---LSPSDLPPGRGGPSL 625
+ G + T++LQ D SGS +VY++ D +++++ L+P+ + G ++
Sbjct: 646 SPREMG-GNISNTLLLQEARTDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAI 704
Query: 626 YP---TGFSLLPDVEAAQ---DSSGIA-LGEVGGTLMTMGFQIPVKLASGDRMYSRS--- 675
P F L P A Q S+ IA E GG+ +T+ +Q+ G S S
Sbjct: 705 LPDCLESFPLHPAATADQAGTSSAAIASRSETGGSFVTVTYQMFFSSQGGAAPASSSIHQ 764
Query: 676 AASAIRLMTDTIALVKKTL 694
A++ TD +V TL
Sbjct: 765 GRDALKKATDIFKVVLDTL 783
>Os10g0575600 Homeodomain-related containing protein
Length = 882
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 33/445 (7%)
Query: 213 QHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIG- 271
+ D+Q++ +LA A L + + LW G + + A ++P D + G
Sbjct: 341 EQDKQLVVDLAATAADQLARMCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGG 400
Query: 272 --FKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGY--NG 327
+ E TR ++V+M+ ++VD +D + FP ++ A T +I + G+ +G
Sbjct: 401 AVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSG 460
Query: 328 VIQLMTVEMMFPSPLVPARKCTFLRYC-NVLNEGLVVVIDV---SLDDGSIFS---KCRK 380
+ LM E+ F SPLV AR+ F RYC + +EG ++D ++G + + +CR+
Sbjct: 461 TLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRR 520
Query: 381 MPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCM-----NGLVFGARRWVATMARQ 435
PSG +IQ + +V +EH+ + G + QP +G FGA RW++ + RQ
Sbjct: 521 RPSGCIIQDMPNGYSRVVWVEHM--EMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQ 578
Query: 436 SARM-RDVHHNKTAPQV--STKGRKNLMKLADDLLASFXXXXXXXXXXXXXXXXXXXXEK 492
R+ ++ N V + + R N+MKL+ ++ +F +
Sbjct: 579 CERLASELARNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDT 638
Query: 493 DIRVAYRRTTEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEE 552
IRV R+ TE IL+ ++ LP ++ F+LL + RC+ ++L +G + E
Sbjct: 639 -IRVTTRKNTEPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEV 697
Query: 553 VTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNG-YDASGSFMVYSQIDSELMNTMVL 611
IA G + +++L A + ++LQ + + GS +V++ +D + + +
Sbjct: 698 AHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMS 757
Query: 612 S--PSDLPPGRGGPSLYPTGFSLLP 634
PS +P L P GF++ P
Sbjct: 758 GEDPSYIP-------LLPLGFAIFP 775
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 56 PVNSSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQ 115
P ++ N K+KR R T Q + +E F C HPDD Q+ LS+ GL QVKFWFQ
Sbjct: 125 PSGAAGGNAKKKR-YHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQ 183
Query: 116 NKRTQVKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERL 175
N+RTQ+K + +N L ENE L+ +N R++ A VC C +++V ++ E ++L
Sbjct: 184 NRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQL 243
Query: 176 MGQSEWLQQEIAR 188
++ L+ E+ R
Sbjct: 244 RIENARLKDELDR 256
>Os08g0136100 Similar to Roc1
Length = 130
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 69/123 (56%)
Query: 66 RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMC 125
RK+R R T Q + LE FF C HPDD Q++ LS GL QVKFWFQNKRTQ+KT
Sbjct: 1 RKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 60
Query: 126 WKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQE 185
+ EN L ENE LR EN R K A A C C + +++ + L ++ L+ E
Sbjct: 61 ERHENNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDE 120
Query: 186 IAR 188
I R
Sbjct: 121 IDR 123
>Os08g0187500 Similar to Roc1
Length = 326
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 61/110 (55%)
Query: 50 ADSGLLPVNSSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQ 109
A GL + RK+R R T Q + +E FF C HPDD Q++ LS GL Q
Sbjct: 90 AGDGLSGDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQ 149
Query: 110 VKFWFQNKRTQVKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTC 159
VKFWFQNKRTQ+K + EN +L EN+ LR EN R K A +A C C
Sbjct: 150 VKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALSSASCPNC 199
>Os09g0526300 Similar to Homeobox protein GLABRA2 (Homeobox-leucine zipper
protein ATHB-10) (HD-ZIP protein ATHB-10)
Length = 131
Score = 86.3 bits (212), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Query: 66 RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVK-TM 124
+K+R R T +Q + LE F C HPD+ Q+ LS L QVKFWFQN+RTQ+K T
Sbjct: 1 KKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60
Query: 125 CWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQ 184
+ EN L EN+ LR EN ++ A +C +C ++V ++++E + L ++ L+
Sbjct: 61 IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120
Query: 185 EIAR 188
E+ R
Sbjct: 121 ELDR 124
>Os06g0208100 Similar to Homeodomain protein HOX3
Length = 129
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 66 RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMC 125
R++R R T +Q + LE F C HPD+ Q+ LS GL Q+KFWFQN+RTQ+K
Sbjct: 1 RRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQH 60
Query: 126 WKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQE 185
+ +N L EN+ +R EN ++ A +C TC V E ++L ++ L++E
Sbjct: 61 ERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDYFDE-QKLRMENARLKEE 119
Query: 186 IAR 188
+ R
Sbjct: 120 LDR 122
>Os09g0526200 Similar to OCL3 protein
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 37/208 (17%)
Query: 511 ILSVTASLRLP--LPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVGNDDTVTVL 568
+LS T S+RLP LP R FD LR+ R WD+L +G ++E IA+G + + V++L
Sbjct: 101 VLSATTSVRLPGTLPQR-VFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHHGNAVSLL 159
Query: 569 HCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGRGGPSLY-- 626
A ++ +ILQ D+SGS +VY+ +D + M+ ++ GG S Y
Sbjct: 160 R-PNATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVM---------NGGDSAYVS 209
Query: 627 --PTGFSLLPDVEAAQDSSGIALGEVGG------------------TLMTMGFQIPVKLA 666
P+GF++LPD + + + EVG +L+T+ FQI V
Sbjct: 210 LLPSGFAILPD--GHNNGASPSPAEVGSGASPNSAAGGGGGSNNTGSLVTVAFQILVNNL 267
Query: 667 SGDRMYSRSAASAIRLMTDTIALVKKTL 694
++ S + L++ TI +K L
Sbjct: 268 PTAKLTVESVDTVSNLLSCTIQKIKSAL 295
>Os10g0480200 Similar to Rolled leaf1
Length = 840
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 167/415 (40%), Gaps = 84/415 (20%)
Query: 72 RLTGKQSEVLEGFFSICGHPDDGQKRHLSE----TTGLGLDQVKFWFQNKRTQVKTMCWK 127
R T +Q E LE ++ C P +++ L + Q+K WFQN+R + K K
Sbjct: 32 RYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQR--K 89
Query: 128 EE------NYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEW 181
E N KL+ N++L +EN R L ++ +L+ ++ +
Sbjct: 90 EASRLQAVNRKLTAMNKLLMEENER---------------------LQKQVSQLVHENAY 128
Query: 182 LQQEI---ARSNGTPPAANLAFQLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHV 238
++Q++ + N T +N+ N D + + +A+ + + A
Sbjct: 129 MKQQLQNPSLGNDTSCESNVTTPQNPLRD-----ASNPSGLLTIAEETLTEFLSKATGTA 183
Query: 239 ALWFPVPGCSYEVLNKMAYDQAYPGDNSANAI----GFKTEATRAVSMVMMDYKSVVDFL 294
W P+PG PG +S + G + A RA +V ++ +V+ L
Sbjct: 184 VDWVPMPGMK-------------PGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEIL 230
Query: 295 MDPYNYRTFFPEVISGAVTNRIYT-WPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRY 353
D P + ++T +P +G G I+L+ ++M P+ LVPAR LRY
Sbjct: 231 KDR-------PSWFRDCRSLEVFTMFPAGNG--GTIELVYMQMYAPTTLVPARDFWTLRY 281
Query: 354 CNVLNEGLVVVID---------VSLDDGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVL 404
+ +G +VV + S F + +PSG+L++ V ++H+
Sbjct: 282 TTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLD 341
Query: 405 ADDTGVHELYQPCMNGLVFGARRWVATMARQSA--RMRDVHHNKTAPQVSTKGRK 457
+ V E+ +P ++ + R VA +A +R + + V GR+
Sbjct: 342 LEAWSVPEVLRP-----LYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQ 391
>Os01g0760800 Similar to Homeodomain protein 1
Length = 134
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 67 KRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMCW 126
++ R T +Q ++E F HPD+ Q++ +S+ GL QVKFWFQN+RTQ+K
Sbjct: 1 RKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIKE--- 57
Query: 127 KEENYKLSVENEILRDENRRVK-IAHCTAVCLTC 159
+ EN L E E L+DE+R ++ +A + CL C
Sbjct: 58 RHENSLLKSELEKLQDEHRAMRELAKKPSRCLNC 91
>Os07g0426600
Length = 196
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 49 EADSGLLPVN---SSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGL 105
EAD + + S +E +R++R T Q + LE F C + Q+ L++ G+
Sbjct: 31 EADDAAVDYHDDSSEGQDEVSNKRMKRHTDDQIKHLESVFERCTYLGGNQRVQLAKKLGM 90
Query: 106 GLDQVKFWFQNKRTQVKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTC 159
QVKFWFQN+RT+ K ++E L EN++L EN+ +K A +C TC
Sbjct: 91 EERQVKFWFQNRRTRKKMHDERQEGMWLQEENDVLHAENKVLKEAMWANICFTC 144
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,088,000
Number of extensions: 947763
Number of successful extensions: 2061
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2025
Number of HSP's successfully gapped: 18
Length of query: 709
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 601
Effective length of database: 11,396,689
Effective search space: 6849410089
Effective search space used: 6849410089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)