BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0269900 Os01g0269900|AK068395
(429 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0269900 Actin/actin-like family protein 794 0.0
AK059967 186 2e-47
Os03g0718100 Actin 1 177 2e-44
Os05g0106600 Similar to Actin 97 175 7e-44
Os10g0510000 actin [Oryza sativa (japonica cultivar-group)] 174 1e-43
Os11g0163100 Similar to Actin 7 (Actin 2) 174 1e-43
Os03g0836000 Similar to Actin 7 (Actin 2) 172 4e-43
Os05g0438800 Similar to Actin 1 170 2e-42
Os12g0163700 Similar to Actin 7 (Actin 2) 160 1e-39
Os12g0641000 Similar to Actin 1 120 3e-27
Os02g0596900 Actin/actin-like family protein 115 4e-26
AK110209 104 1e-22
Os08g0369300 Similar to ARP2 (Actin-related protein 2) 89 9e-18
Os08g0137200 Actin/actin-like family protein 79 9e-15
>Os01g0269900 Actin/actin-like family protein
Length = 429
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/406 (95%), Positives = 386/406 (95%)
Query: 24 DMNPTAVVPNCMAKPPGSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWER 83
DMNPTAVVPNCMAKPPGSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWER
Sbjct: 24 DMNPTAVVPNCMAKPPGSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWER 83
Query: 84 VIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASR 143
VIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASR
Sbjct: 84 VIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASR 143
Query: 144 QPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNV 203
QPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNV
Sbjct: 144 QPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNV 203
Query: 204 MDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEA 263
MDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEA
Sbjct: 204 MDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEA 263
Query: 264 CRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEMLFHPIDLGMN 323
CRYSSLPANG PELSQNEFVLTNERFLVPEMLFHPIDLGMN
Sbjct: 264 CRYSSLPANGESVRKDSSDSDRSKFEDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMN 323
Query: 324 QAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKII 383
QAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKII
Sbjct: 324 QAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKII 383
Query: 384 AQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFFH 429
AQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFFH
Sbjct: 384 AQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFFH 429
>AK059967
Length = 375
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 189/415 (45%), Gaps = 73/415 (17%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 24 DDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWD 80
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P +LL E NP A + +++FE ++ VA ++
Sbjct: 81 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAV 139
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G TH P+ + + L +A+ R+DL G+ LT+YL ++
Sbjct: 140 LSLYASGR-------TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 192
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKLC+V+LD ++ A SS SY LPDG
Sbjct: 193 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSS---ALEKSYELPDG---- 245
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ NERF PE
Sbjct: 246 ---------------------------------------------QVITIGNERFRAPEA 260
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P LGM AG+ E +I C ++ L+ ++L+GG+T+FP +R++KEL L
Sbjct: 261 LFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMQKELTAL 320
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 321 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 375
>Os03g0718100 Actin 1
Length = 377
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 73/415 (17%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 26 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWD 82
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P +LL E NP A + +++FE ++ VA ++
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAV 141
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+YL ++
Sbjct: 142 LSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 194
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKL +++LD ++ A+ SS+ SY LPDG
Sbjct: 195 LTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSS---VEKSYELPDG---- 247
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ ERF PE+
Sbjct: 248 ---------------------------------------------QVITIGAERFRCPEV 262
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P +GM AG+ E +I C ++ L+ I+L+GG+T+FP +R+ KE+ L
Sbjct: 263 LFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++K++A + W GGS+LA F+ M I K+EY+E G R+ F
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>Os05g0106600 Similar to Actin 97
Length = 377
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 187/415 (45%), Gaps = 73/415 (17%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 26 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWD 82
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P +LL E NP A + +++FE ++ VA ++
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAV 141
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++
Sbjct: 142 LSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKI 194
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKL +V+LD +L A+ N + SY LPDG
Sbjct: 195 LTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAK---NSSSVEKSYELPDG---- 247
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ ERF PE+
Sbjct: 248 ---------------------------------------------QVITIGAERFRCPEV 262
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P +GM AG+ E +I C ++ L+ I+L+GG+T+FP +R+ KE+ L
Sbjct: 263 LFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++K++A + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>Os10g0510000 actin [Oryza sativa (japonica cultivar-group)]
Length = 377
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 188/415 (45%), Gaps = 73/415 (17%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 26 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWD 82
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P +LL E NP A + +++FE ++ VA ++
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFSVPAMYVA-IQAV 141
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++
Sbjct: 142 LSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKI 194
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKL +V+LD +L A+ SS+ SY LPDG
Sbjct: 195 LTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSS---VEKSYELPDG---- 247
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ ERF PE+
Sbjct: 248 ---------------------------------------------QVITIGAERFRCPEV 262
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
+F P +GM G+ E +I C ++ L+ I+L+GGST+FP +R+ KE+ L
Sbjct: 263 MFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL 322
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++K++A + W GGS+LA F+ M I+++EYEE G R+ F
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>Os11g0163100 Similar to Actin 7 (Actin 2)
Length = 377
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 187/415 (45%), Gaps = 73/415 (17%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 26 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWD 82
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P +LL E NP A + +++FE ++ VA ++
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAV 141
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++
Sbjct: 142 LSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKI 194
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKL +V+LD +L A+ SS+ SY LPDG
Sbjct: 195 LTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELEAAKSSSS---VEKSYELPDG---- 247
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ ERF PE+
Sbjct: 248 ---------------------------------------------QVITIGAERFRCPEV 262
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P +GM G+ E +I C ++ L+ I+L+GGST+FP +R+ KE+ L
Sbjct: 263 LFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL 322
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++K++A + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 377
>Os03g0836000 Similar to Actin 7 (Actin 2)
Length = 377
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 187/415 (45%), Gaps = 73/415 (17%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 26 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVNNWD 82
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P +LL E NP A + +++FE ++ VA ++
Sbjct: 83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVA-IQAV 141
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G TH P+ + + L +A+ R+DL G+ LT+ L ++
Sbjct: 142 LSLYASGR-------TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKI 194
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKL +++LD +L A+ SS+ SY LPDG
Sbjct: 195 LTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSS---VEKSYELPDG---- 247
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ ERF PE+
Sbjct: 248 ---------------------------------------------QVITIGAERFRCPEV 262
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P +GM G+ E +I C ++ L+ I+L+GG+T+FP +R+ KE+ L
Sbjct: 263 LFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++K++A + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 323 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
>Os05g0438800 Similar to Actin 1
Length = 376
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 192/414 (46%), Gaps = 77/414 (18%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ QA+ +TL+ PI+ G + N +
Sbjct: 25 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQAKR---GILTLKYPIEHGIVNNWD 81
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P + +LL E NP A + +++FE ++ VA ++
Sbjct: 82 DMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVA-IQAV 140
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G +H P+ + +TL +A+ R+DL G+ LT++L ++
Sbjct: 141 LSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYTLPHAILRLDLAGRDLTDHLMKI 193
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R SL E ++ D KEKL +V+LD +L +R SS+ SY +PDG
Sbjct: 194 LTERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETSRSSSS---VEKSYEMPDG---- 246
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ +ERF PE+
Sbjct: 247 ---------------------------------------------QVITIGSERFRCPEV 261
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P +GM G+ E +I C ++ L+ ++L+GGST+FP +R+ KE+ L
Sbjct: 262 LFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSL 321
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMG----SMRC 423
P +VK+IA + W GGS+LA F+ M I+K EY+E G M+C
Sbjct: 322 APSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKC 375
>Os12g0163700 Similar to Actin 7 (Actin 2)
Length = 363
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 179/415 (43%), Gaps = 87/415 (20%)
Query: 24 DMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQE 75
D P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N +
Sbjct: 26 DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWD 82
Query: 76 VQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
++W N L+V P ++ FN PA+ A ++
Sbjct: 83 DMEKIWHHTFYNELRVAPEEKMTQIMFESFNVPAMYVAIQ------------------AV 124
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++
Sbjct: 125 LSLYASGRT-------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKI 177
Query: 196 ISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYK 253
++ R S E ++ D KEKL +V+LD +L A + N + SY LPDG
Sbjct: 178 LTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDG---- 233
Query: 254 KGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEM 313
+ ERF PE+
Sbjct: 234 ---------------------------------------------QVITIGAERFRCPEV 248
Query: 314 LFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPL 373
LF P +GM AG+ E +I C ++ L+ ++L+GGST+FP +R+ KE+ L
Sbjct: 249 LFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITAL 308
Query: 374 VPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
P ++K++A + W GGS+LA F+ M I+K+EY+E G R+ F
Sbjct: 309 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 363
>Os12g0641000 Similar to Actin 1
Length = 243
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 62/302 (20%)
Query: 61 TLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFE 120
TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++FE
Sbjct: 1 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 60
Query: 121 ELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRR 180
++ VA +++ LY + R +V+D G +H P+ + + L +A+ R
Sbjct: 61 TFNAPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILR 112
Query: 181 MDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDN 238
+DL G+ LT+YL ++++ R S E ++ D KEKL +++LD ++ A S+
Sbjct: 113 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFDQEMATAATGSS-- 170
Query: 239 PFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQ 298
SY LPDG G
Sbjct: 171 -VEKSYELPDGQVITIG------------------------------------------- 186
Query: 299 NEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTL 358
ERF PE+LF P +GM AG+ E +I C ++ L+ I+L+GG+T+
Sbjct: 187 ------AERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTM 240
Query: 359 FP 360
FP
Sbjct: 241 FP 242
>Os02g0596900 Actin/actin-like family protein
Length = 428
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 155/400 (38%), Gaps = 68/400 (17%)
Query: 44 WLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEP 103
+ + + A+ L PI G + N + W++ I N L+ DP + LL E
Sbjct: 69 FFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTES 128
Query: 104 QFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFT 163
PP + T E++FE L +A P L A+ + +VVD G T
Sbjct: 129 PLTPPETREYTGEIMFETFNVPGLYIACQPVLA---LAAGYTTTKCEMTGVVVDVGDGAT 185
Query: 164 HASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETL--LIDDAKEKLCFVS 221
H PV + + ++R + + GK +T ++++L+ R ++ E + KE C+
Sbjct: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
Query: 222 LDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGXXXXXXXX 281
D+ + N S I P K G D
Sbjct: 246 SDIVKEFNKHDREPNKYIKHWSGIKP-----KTGAKYTCD-------------------- 280
Query: 282 XXXXXXXXXXXXPELSQNEFVLTNERFLVPEMLFHPIDLGMN-QAGLAECIVRAIQACHP 340
+ ERFL PE+ FHP + L I + IQ+
Sbjct: 281 ---------------------IGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPI 319
Query: 341 HLQPVLFERIILTGGSTLFPRFTERLEKELRPLV----------------PDDYQVKIIA 384
+ L++ I+L+GGST+F F RL+++L+ +V +V +++
Sbjct: 320 DTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVS 379
Query: 385 QEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCR 424
W GGS+LA +F C TK+EYEE G+ CR
Sbjct: 380 HPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICR 419
>AK110209
Length = 618
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 186/473 (39%), Gaps = 97/473 (20%)
Query: 25 MNPTAVVPNCMAKPPGSKKWL-VADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWER 83
++P A + A PG+K + V+ + D + LR P G +++ Q+ +W+
Sbjct: 83 ISPHAASSSPTAPAPGTKTSVFVSSHIHTLLDDYAALHLRLPHQSGVVVDWAAQKTIWDH 142
Query: 84 VIRNLLQVDPN----------NSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAP 133
V+ N L P ++++ E N Q+ATD L+FE G ++
Sbjct: 143 VLANHLAKLPQRPKAKGRLLAGKAVVIAETYLNLEPAQYATDLLLFEHYGASAVWRTTPA 202
Query: 134 SLVHL-------------------------------------------YEASRQPSLF-- 148
+LV L +A+ P +
Sbjct: 203 ALVGLGIPAFATPSPIPPPQASSSAEIAEVAASGPKRSRSARTEAVDKEQAAGLPRVLAP 262
Query: 149 -RAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDET 207
R Q LV+D G+SF HA P++ + AVRR++LG K L N LKE +S+R L+ MDE+
Sbjct: 263 RRPQSMLVLDLGYSFCHAVPIVNGQVVYPAVRRLELGAKMLINLLKETLSFRQLDTMDES 322
Query: 208 LLIDDAKEKLCFVSLDV------PGDLRLARL--------SSND----------NPFRCS 243
L+ FV+ +V D LAR+ + ND + +
Sbjct: 323 WLVTHIFRHTSFVAAEVGARSHGANDDHLARIRDTPAALWTYNDLMLLAKQRASSGMAVT 382
Query: 244 YILPDGITYKKGFVKDLDEACRYSSL-----PAN-GXXXXXXXXXXXXXXXXXXXXPELS 297
+ LPD G + + RY + PA+ G
Sbjct: 383 WRLPDYGGTTPGAGEAQRDRARYGYIVDGPNPASKGSQDVEWESAYIASEGSSGRRGHAE 442
Query: 298 QNE----FVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQP------VLF 347
+++ +L +ER+ + E LF+P L ++Q GL E + AI A Q +++
Sbjct: 443 EHDEVQTLILESERYSMLEHLFNPAALELDQQGLPELVASAISAVASSSQSLRAAADMMW 502
Query: 348 ERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLA 400
I+L GG + RL EL PL P D + I+ +DP A G +LA
Sbjct: 503 ANIVLVGGLSGAVNMRRRLHAELAPLAPADVPLHIVVPDDPQRAAVDAGVVLA 555
>Os08g0369300 Similar to ARP2 (Actin-related protein 2)
Length = 441
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 146/369 (39%), Gaps = 95/369 (25%)
Query: 27 PTAVVPNCMAKPPGSKKWLVADQLQAQDVD--VTGMT---LRRPIDRGY-LINQEVQR-- 78
PT+V P + +P + LQ Q++ V G LR +D Y + N VQ
Sbjct: 26 PTSVFPCVVGRP----LLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWD 81
Query: 79 ---EVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSL 135
+W+ + L+VDP+ +LL +P NP + E +FE+ F + + ++
Sbjct: 82 DMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFI-QVQAV 140
Query: 136 VHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKEL 195
+ LY LV+D G TH PV+ F+ + +RM++ G+ +T+YL +L
Sbjct: 141 LSLYAQG-------LLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDL 193
Query: 196 ISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKG 255
+S R L + I+ +E + S D R +L SY LPDG K G
Sbjct: 194 LSRRGL----LSHFIELKRENM--YSYDYK---REYQLGLETTILVKSYTLPDGRVIKVG 244
Query: 256 FVKDLDEACRYSSLPANGXXXXXXXXXXXXXXXXXXXXPELSQNEFVLTNERFLVPEMLF 315
ERF PE LF
Sbjct: 245 -------------------------------------------------TERFQAPEALF 255
Query: 316 ------HPID--------LGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPR 361
H ID + + G+A+ R IQ + L++ I+L+GGST++P
Sbjct: 256 TPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPG 315
Query: 362 FTERLEKEL 370
RLEKE+
Sbjct: 316 LPSRLEKEM 324
>Os08g0137200 Actin/actin-like family protein
Length = 443
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 163/389 (41%), Gaps = 61/389 (15%)
Query: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
M + P+ G + + ++ +W R L ++P +L+ EP N + EL+F
Sbjct: 92 MEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMF 151
Query: 120 EELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVR 179
E+ +L +A L RA SLVVD G T + V + L +V
Sbjct: 152 EKYKVPALFLAKNAVLTSFASG-------RA-TSLVVDSGGGSTVVAAVHDGYVLQKSVA 203
Query: 180 RMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDV-PGDLRLARL----S 234
+GG+ LT+ + + + + + + + + F +V PG+ ++ L +
Sbjct: 204 TSPIGGEFLTDCMMKSLESKGVVI----------RPRYSFKKKEVGPGEYKVVDLDLPNT 253
Query: 235 SNDNPFRCSYILPDGITYKKGFVKD--LDEACRYSSLPANGXXXXXXXXXXXXXXXXXXX 292
+ C + I V D DE Y+++P
Sbjct: 254 TESYKLYCMRAIASDIKESVCRVPDTAFDEVA-YANVPTTSY------------------ 294
Query: 293 XPELSQNEFV-LTNERFLVPEMLFHP--------IDL---GMNQAGLAECIVRAIQACHP 340
EL + + + +RF +P++LF+P +D M+ GL ++ ++ C
Sbjct: 295 --ELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDV 352
Query: 341 HLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPI---LGAWRGGS 397
++ L I+L+GGS+ + ERLEKE+ + +VK++A + + W GGS
Sbjct: 353 DIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGS 412
Query: 398 LLAHRPDFESMCITKSEYEEMGSMRCRRR 426
+LA F+ M +K+EYEE G +R+
Sbjct: 413 ILASLGSFQQMWFSKAEYEEHGVSYIQRK 441
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,032,037
Number of extensions: 566164
Number of successful extensions: 994
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 970
Number of HSP's successfully gapped: 23
Length of query: 429
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 325
Effective length of database: 11,605,545
Effective search space: 3771802125
Effective search space used: 3771802125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)