BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0310800 Os11g0310800|AK101122
(708 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0310800 ATP-dependent helicase, DEAH-box family protein 1397 0.0
Os07g0508000 Similar to ADR224Wp 509 e-144
Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA he... 506 e-143
Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA he... 506 e-143
Os01g0212100 ATP-dependent helicase, DEAH-box family protein 444 e-124
Os03g0314100 Helicase, C-terminal domain containing protein 417 e-116
Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA he... 405 e-113
Os06g0192500 ATP-dependent helicase, DEAH-box family protein 268 1e-71
Os02g0736600 ATP-dependent helicase, DEAH-box family protein 174 1e-43
Os01g0767700 Similar to DEIH-box RNA/DNA helicase 171 2e-42
Os04g0432300 Double-stranded RNA binding domain containing ... 130 3e-30
Os03g0282700 DEAD/DEAH box helicase, N-terminal domain cont... 127 2e-29
Os11g0196100 95 2e-19
Os01g0118100 Similar to Maleless protein 72 1e-12
>Os11g0310800 ATP-dependent helicase, DEAH-box family protein
Length = 708
Score = 1397 bits (3616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/695 (98%), Positives = 682/695 (98%)
Query: 14 ELPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPXXXXX 73
ELPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQP
Sbjct: 14 ELPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPRRVAA 73
Query: 74 XXXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVII 133
QELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVII
Sbjct: 74 VSVSRRVAQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVII 133
Query: 134 LDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLF 193
LDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLF
Sbjct: 134 LDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLF 193
Query: 194 PVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEE 253
PVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEE
Sbjct: 194 PVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEE 253
Query: 254 GSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVK 313
GSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVK
Sbjct: 254 GSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVK 313
Query: 314 QRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEIQ 373
QRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEIQ
Sbjct: 314 QRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEIQ 373
Query: 374 RSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGRI 433
RSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGRI
Sbjct: 374 RSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGRI 433
Query: 434 MAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQELPDGS 493
MAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQELPDGS
Sbjct: 434 MAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQELPDGS 493
Query: 494 GWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDVQ 553
GWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDVQ
Sbjct: 494 GWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDVQ 553
Query: 554 AKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEYG 613
AKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEYG
Sbjct: 554 AKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEYG 613
Query: 614 KLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLERLDMNKLSGGSSGSKDPEPLED 673
KLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLERLDMNKLSGGSSGSKDPEPLED
Sbjct: 614 KLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLERLDMNKLSGGSSGSKDPEPLED 673
Query: 674 KQVSSPKKAMDVKQSDVDSKIQAARERYLARKGKK 708
KQVSSPKKAMDVKQSDVDSKIQAARERYLARKGKK
Sbjct: 674 KQVSSPKKAMDVKQSDVDSKIQAARERYLARKGKK 708
>Os07g0508000 Similar to ADR224Wp
Length = 1280
Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/668 (41%), Positives = 408/668 (61%), Gaps = 27/668 (4%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPXXXXXX 74
LPI D+++ V N VVVV+GETGSGK+TQL+Q LH GYT G + TQP
Sbjct: 583 LPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYTTTGIVGCTQPRRVAAM 642
Query: 75 XXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVIIL 134
+E+ LG +VGYAIRFED TS T IKY+TDGVLLRE+L D +L +Y VI++
Sbjct: 643 SVAKRVSEEMETELGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVM 702
Query: 135 DEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLFP 194
DEAHERSLNTD+L G++K+++ R D K+++TSATL+ K SKFF G PV +IPG FP
Sbjct: 703 DEAHERSLNTDVLFGILKKVVA-RRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFP 761
Query: 195 VEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEEG 254
V +S +Y+E++++ A+ IH+ PGD+LIFMTG+++I+ L ER++ L
Sbjct: 762 VNIMFSKTPCEDYVEAAVKQAMTIHITSGPGDILIFMTGQEEIEATCYALAERLEQLISS 821
Query: 255 SCMDA---LVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGY 311
S +LP++ LP + Q ++F A R+ IVATN+AETSLTVDG+ +VID GY
Sbjct: 822 STKTVPKLSILPIYSQLPADLQAKIFQKAEEGTRKCIVATNIAETSLTVDGIFYVIDTGY 881
Query: 312 VKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPE 371
K + YNP GM +L V +SR ADQRAGRAGRT PG CYRL+ S YQ E L +PE
Sbjct: 882 GKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEMLPNPVPE 941
Query: 372 IQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVG 431
IQR++L VL LKSL + N+L FDF+DPP +E++ +++ QL+++ A++ G +T +G
Sbjct: 942 IQRTNLGNVVLLLKSLKVE--NLLDFDFMDPPPQENILNSMYQLWVLGALNNVGALTVIG 999
Query: 432 RIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSA-EITFR-STRSKDMEGKRKRQEL 489
M E PL+P+L++ L+ +L CL + LT+ ++LS + FR R+++ + R++ +
Sbjct: 1000 WKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFV 1059
Query: 490 PDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGS 549
P+ DH+ LL ++ W Y WC+DH L V+G++ +++VR+QL I++ +
Sbjct: 1060 PE----SDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPL 1115
Query: 550 TDVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEG 609
T ++ +R+A+C Y + A L G + +HP S L G
Sbjct: 1116 TSCHM--------EWDVVRKAICSAYFHNAAR--LKGVGEYVNCRNGMPCHLHPSSALYG 1165
Query: 610 DEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVK---PILKKLERLDMNKLSGGSSGSK 666
G P YVVYHEL+ TT+ +M+ V+AVD W+ P+ ++ D + L +
Sbjct: 1166 --LGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETDTSLLDHKKRQKE 1223
Query: 667 DPEPLEDK 674
D +E++
Sbjct: 1224 DKTAMEEE 1231
>Os06g0343100 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1084
Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/663 (41%), Positives = 403/663 (60%), Gaps = 26/663 (3%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPXXXXXX 74
LPI ++E++ AV N V+VVIGETGSGK+TQ++Q L GY RG IA TQP
Sbjct: 431 LPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYITRGKIACTQPRRVAAE 490
Query: 75 XXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVIIL 134
+E LG+EVGY+IRF+D T T IKY+TDG+LLRE L D +L YSV++L
Sbjct: 491 SVAKRVSEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLSSYSVVML 550
Query: 135 DEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLFP 194
DEAHER++ TDIL L+K+LI+ R +DLK+++TSATLD K S +F C + IPG +P
Sbjct: 551 DEAHERTIYTDILFALLKKLIR-RRTDLKLIVTSATLDAEKFSGYFFDCNIFTIPGRTYP 609
Query: 195 VEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEEG 254
VE YS + ++Y+ ++L T IH+ E GD+L+F+TG+++ID L ER+++L
Sbjct: 610 VEILYSKQPESDYMHAALLTVSQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKSLGR- 668
Query: 255 SCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVKQ 314
+ + L+ ++ + P E Q ++F P PP R+ +VATN+AE S+T+DG+ +VID G+ K
Sbjct: 669 NVPELLIYAVYSAQPAEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVIDPGFAKL 728
Query: 315 RQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEIQR 374
YNP G+ SL + IS+ A QRAGRAGRT PGKCYRLY S Y+ E T PEIQR
Sbjct: 729 NVYNPKQGLDSLIITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTTPEIQR 788
Query: 375 SSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGRIM 434
+L +VL +K++ + D +L FDF+DPP+ +SL A+ QLY + A+DE G +T VGR M
Sbjct: 789 INLGETVLNMKAMGIND--LLSFDFMDPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRM 846
Query: 435 AELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQEL--PDG 492
AE P EP LS+ L+ + +LGC + LT+ A++ F R K + RKR P+
Sbjct: 847 AEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADRKRGNFFQPE- 905
Query: 493 SGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDV 552
GDH+ LL ++++W + WC ++ +Q+ ++ ++DVR QL +I+ K
Sbjct: 906 ---GDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVV-- 960
Query: 553 QAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEY 612
+ D K+R+A+ G+ A R GY T+ Q V +HP S L +
Sbjct: 961 ------SAGNDLTKVRKAITAGFFFH-AARKDPQGGYRTIADHQQ-VYIHPASAL----F 1008
Query: 613 GKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLER-LDMNKLSGGSSGSKDPEPL 671
+ P +V+YHE++ TT+ +MR V+A+D W+ + + R D K+S + EPL
Sbjct: 1009 QQQPEWVIYHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKISKRKRQER-IEPL 1067
Query: 672 EDK 674
D+
Sbjct: 1068 YDR 1070
>Os05g0389800 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box
protein 8)
Length = 1070
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/679 (39%), Positives = 415/679 (61%), Gaps = 45/679 (6%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRG--AIAVTQPXXXX 72
LP+ + +D+++ A++ + V++V+GETGSGK+TQ+ Q LH GYT G +A TQP
Sbjct: 404 LPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGGRKKVACTQPRRVA 463
Query: 73 XXXXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVI 132
+E+ V LG EVGY+IRFED TSEKT IKY+TDG+LLRE L +P+L YSV+
Sbjct: 464 AMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYSVV 523
Query: 133 ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 192
++DEAHER+L TDIL GL+K + + R D+K+LI+SATL+ K S FF PV IPG
Sbjct: 524 VVDEAHERTLATDILFGLVKDIARLR-PDMKLLISSATLNADKFSDFFDAAPVFRIPGRR 582
Query: 193 FPVEKFYSTEHPTNYIESSLRTAIDIHVKESPG--DVLIFMTGKDDIDKMVSKLEERIQN 250
F V Y+ +YI++++ T + +HV E PG D+L+F+TG+++I+ + L R++
Sbjct: 583 FEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLTGQEEIETVEEILRHRLRV 642
Query: 251 LEEGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCG 310
L G + ++ P++ +LP E Q ++F PAP R+ ++ATN+AETSLT+DG+ +V+D G
Sbjct: 643 LG-GKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLATNIAETSLTIDGIKYVVDPG 701
Query: 311 YVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIP 370
+ K + YNP +GM SL V +SR A+QRAGR+GRT PG+C+RLY + + + +P
Sbjct: 702 FCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPGECFRLYTEYNFVSDLDDDAVP 761
Query: 371 EIQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDV 430
EIQRS+LA VL LK+L + D ++ FDF+DPP ESL AL +L+ + A++ G++T
Sbjct: 762 EIQRSNLASVVLALKALGIND--LVGFDFMDPPPAESLLRALEELFALGALNSRGELTKT 819
Query: 431 GRIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSA-EITFRSTRSKDMEGKRKRQEL 489
GR MAE PL+P LS+ ++ + GC + +T+AA+LSA F R K + R+
Sbjct: 820 GRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVFYRPRDKRVHADAARRAF 879
Query: 490 PDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKI---- 545
G+ GDH+ LL ++ +W +GY P+WC + +Q R M+ ++DVR+QL +++++
Sbjct: 880 HAGNA-GDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAP 938
Query: 546 --AKGSTDVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHP 603
+ G D+ A +R+A+ GY A R+ Y V R Q V VHP
Sbjct: 939 CSSAGGGDLDA------------VRKAVTAGYFRHAA-RLQRDGSYRAVKSR-QTVFVHP 984
Query: 604 FSVLEGDEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKK-LERLDMNKLSGGS 662
S + P + +YHEL+ TT+ +MR V+ + W+ I ER D++
Sbjct: 985 SSGVA----QAPPRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYERKDVD------ 1034
Query: 663 SGSKDPEPLEDKQVSSPKK 681
+PEP + ++P++
Sbjct: 1035 ----EPEPKKTAAATTPQE 1049
>Os01g0212100 ATP-dependent helicase, DEAH-box family protein
Length = 700
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/652 (39%), Positives = 384/652 (58%), Gaps = 43/652 (6%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRG-AIAVTQPXXXXX 73
LP+ ++ I+ VE + +V+GETGSGKSTQ+ Q L G+ G I TQP
Sbjct: 51 LPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWAEGGRLIGCTQPRRLAV 110
Query: 74 XXXXXXXXQELSVPLGDEVGYAIRFEDRTSE-KTCIKYLTDGVLLRESLSDPELKQYSVI 132
+E+ V LG+EVGY IRFED+T+ T IK+LTDGVL+RE + DP L +YSVI
Sbjct: 111 QSVASRVAEEVGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTKYSVI 170
Query: 133 ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFS----------- 181
++DEAHERS++TD+LLGL+K+ I+ R DL+++I+SAT++ +S FF+
Sbjct: 171 MVDEAHERSISTDMLLGLLKK-IQRRRPDLRLIISSATIEARSMSTFFNIRRKNSMLESA 229
Query: 182 -GCP-----VLNIPGTLFPVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKD 235
P +L++ G + VE Y E ++Y+++++ T + IH KE PGD+L+F+TG+D
Sbjct: 230 DHLPNPEPAILSVEGKGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQD 289
Query: 236 DIDKMVSKLEERIQNLEEGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAE 295
DID V L E IQ+ +D L+LPL+ LP Q +F P R+ +++TN+AE
Sbjct: 290 DIDAAVKMLNEEIQH-RGRHYLDLLILPLYSGLPRGDQDLIFTPTSKGKRKVVISTNIAE 348
Query: 296 TSLTVDGVVFVIDCGYVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLY 355
TSLT++GVV+V+D G+ KQ+ YNP S + SL V IS+ A QRAGRAGR RPGKC+RLY
Sbjct: 349 TSLTLEGVVYVVDSGFSKQKCYNPISDIESLVVAPISKASARQRAGRAGRVRPGKCFRLY 408
Query: 356 PISIYQKEFLEATIPEIQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQL 415
Y KE IPE+QRS+L + LK+L + NIL FD+ PS E++ AL L
Sbjct: 409 TEEFYLKEMQPEGIPEMQRSNLVSCITQLKALGID--NILGFDWPASPSPEAMIRALEVL 466
Query: 416 YLIDAIDENGQIT-DVGRIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRS 474
Y + +DE+ ++T +G +AE+PL+P +S+ ++ AN GC + LT+AA LS + + S
Sbjct: 467 YSLGILDEDAKLTVPLGFQVAEIPLDPMISKMILSANNFGCSDEILTIAAFLSVQSVWVS 526
Query: 475 TRSKDMEGKRKRQELPDGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDV 534
R E + L + GDH+ L I++ + ++G +WC + L + +K D+
Sbjct: 527 MRGVKKEFDEAK--LRFAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQALKKVIDI 584
Query: 535 RNQLSQIIQKIAKGSTDVQAKKERKSDPDYRKLRRALCVG---YGNQLAERMLHHNGYHT 591
R QL +II++ T D D +R+A+ G Y L E NG +
Sbjct: 585 REQLVRIIKRFGIPLTS--------CDRDMEAVRKAIIAGAFAYACHLEE--YSQNGMYK 634
Query: 592 VGYRAQLVQVHPFSVLEGDEYGKLPVYVVYHELINTTRPFMRNVSAVDQSWV 643
+Q V +HP SVL + P +V+Y L++T + +MRNV A++ SW+
Sbjct: 635 TIRTSQEVYIHPSSVL----FRVNPKWVIYQSLVSTDKHYMRNVIAIEPSWL 682
>Os03g0314100 Helicase, C-terminal domain containing protein
Length = 564
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/462 (44%), Positives = 314/462 (67%), Gaps = 12/462 (2%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQ-ILHRRGYTRRGAIAVTQPXXXXX 73
LP+ + +D+ +A + N ++++GETGSGK+TQ+ Q +L G + R +A TQP
Sbjct: 65 LPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFVLEAEGLSNRSMVACTQPRRVAA 124
Query: 74 XXXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVII 133
+E+ V +G+EVGY+IRFED +S KT +KYLTDG+LLRE+++DP L++Y VI+
Sbjct: 125 MSVSRRVAEEMDVTIGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVIV 184
Query: 134 LDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTLF 193
LDEAHER+L TD+L GL+K ++K+R DLK+++ SATL+ K +FSG P++ +PG L
Sbjct: 185 LDEAHERTLATDVLFGLLKEVLKNRP-DLKLVVMSATLEAEKFQTYFSGAPLMKVPGRLH 243
Query: 194 PVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEE 253
PVE FY+ E +Y+E+++RT + IH+ E GD+L+F+TG+++I+ K+ + I N+ +
Sbjct: 244 PVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKINKEINNMGD 303
Query: 254 GSCMDALVLPLHGSLPPEQQVRVFAPAP-------PNCRRFIVATNVAETSLTVDGVVFV 306
V+PL+ +LPP Q ++F PAP P R+ +V+TN+AETSLT+DG+V+V
Sbjct: 304 -QVGPVKVVPLYSTLPPAMQQKIFEPAPAPSREGGPAGRKIVVSTNIAETSLTIDGIVYV 362
Query: 307 IDCGYVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLE 366
ID G+ KQ+ YNP + SL V IS+ A QRAGRAGRT+PGKC+RLY + +
Sbjct: 363 IDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFNDDLQP 422
Query: 367 ATIPEIQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQ 426
T PEI RS+LA +VL LK L + D ++ FDF+DPP+ E+L AL L + A+D++G
Sbjct: 423 QTYPEILRSNLANTVLTLKKLGIDD--LVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 480
Query: 427 ITDVGRIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSA 468
+T +G M+E PL+P +S+ L+ + + C ++ L+++A+LS
Sbjct: 481 LTPLGETMSEFPLDPQMSKMLVISPKYNCSNEILSISAMLSG 522
>Os02g0301500 Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1)
(DEAH-box protein 8)
Length = 536
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 337/545 (61%), Gaps = 26/545 (4%)
Query: 133 ILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCPVLNIPGTL 192
+LDEAHER+++TD+L GL+K+LIK R SD+++++TSATLD K S +F C + IPG
Sbjct: 1 MLDEAHERTIHTDVLFGLLKQLIK-RRSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRT 59
Query: 193 FPVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLE 252
FPVE Y+ + ++Y++++L T + IH+ E GD+L+F+TG+++ID L ER++ L
Sbjct: 60 FPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQCLYERMKGLG 119
Query: 253 EGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYV 312
+ + ++LP++ +LP E Q ++F PAPP R+ +VATN+AE SLT+DG+ +V+D G+
Sbjct: 120 K-DVPELIILPVYSALPSEMQSKIFDPAPPGKRKVVVATNIAEASLTIDGIYYVVDPGFA 178
Query: 313 KQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEI 372
K YN G+ SL + IS+ A QRAGRAGRT PGKCYRLY S Y+ E TIPEI
Sbjct: 179 KINVYNSKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEI 238
Query: 373 QRSSLAGSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGR 432
QR +L +VL +K++ + D +L FDF+DPP+ ++L A+ QLY + A+DE G +T +GR
Sbjct: 239 QRINLGSTVLNMKAMGIND--LLSFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGR 296
Query: 433 IMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRKRQEL--P 490
MAE PL+P LS+ L+ + +LGC + LT+ A++ F R K + +KR + P
Sbjct: 297 KMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 356
Query: 491 DGSGWGDHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGST 550
+ GDH+ LL ++E+W + WC ++ +Q R ++ ++DVR QL I+ +
Sbjct: 357 E----GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRY---KL 409
Query: 551 DVQAKKERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGD 610
DV + ++ K+R+A+ G+ A R GY T+ Q V +HP S L
Sbjct: 410 DVVSAGR-----NFTKIRKAITAGFFFH-AARKDPQEGYRTL-VENQPVYIHPSSAL--- 459
Query: 611 EYGKLPVYVVYHELINTTRPFMRNVSAVDQSWVKPILKKLER-LDMNKLSGGSSGSKDPE 669
+ + P +V+YHEL+ TT+ +MR V+ +D W+ + + + D K+S + E
Sbjct: 460 -FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLTELAPRFYKSADPTKMSKRKRQERI-E 517
Query: 670 PLEDK 674
PL D+
Sbjct: 518 PLYDR 522
>Os06g0192500 ATP-dependent helicase, DEAH-box family protein
Length = 386
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 215/356 (60%), Gaps = 32/356 (8%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRG-AIAVTQPXXXXX 73
LPI+ E ++ V N ++V+GETGSGK+TQL Q L+ G+ + G I +TQP
Sbjct: 31 LPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYDAGFCQDGKVIGITQPRRVAA 90
Query: 74 XXXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVII 133
+E + LG +VGY+IRF+D TS T IKY+TDG+LLRE+L DP L +YSVI+
Sbjct: 91 VTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSVIV 150
Query: 134 LDEAHERSLNTDILLGLMKRLIKDRA------------------------------SDLK 163
+DEAHER+++TD+LLGL+K++ R+ LK
Sbjct: 151 VDEAHERTVHTDVLLGLLKKVQHSRSIYANKNGKILPDIQHQSQYFTLKACQGTKIDPLK 210
Query: 164 VLITSATLDGLKVSKFFSGCPVLNIPGTLFPVEKFYSTEHPTNYIESSLRTAIDIHVKES 223
++I SA+LD S +F ++I G +PV+ Y+ + ++Y++++L T IH++E
Sbjct: 211 LIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVTIFQIHLEEG 270
Query: 224 PGDVLIFMTGKDDIDKMVSKLEERIQNLEEGSCMDALVLPLHGSLPPEQQVRVFAPAPPN 283
PGD+L F+TG+++I+ + ++ER + L P++ SLP EQQ+ F PAP
Sbjct: 271 PGDILAFLTGQEEIESLDRLIQERARQLPPQRS-KIWTTPIYSSLPSEQQMNAFKPAPAG 329
Query: 284 CRRFIVATNVAETSLTVDGVVFVIDCGYVKQRQYNPSSGMYSLDVVQISRVQADQR 339
R+ ++ATN+AETS+T+ G+ +VID G VK R YNP +GM SL ++ +S+ QA QR
Sbjct: 330 TRKVVLATNIAETSVTIPGIKYVIDPGMVKARAYNPVTGMESLIIIPVSKAQALQR 385
>Os02g0736600 ATP-dependent helicase, DEAH-box family protein
Length = 1272
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 213/451 (47%), Gaps = 79/451 (17%)
Query: 261 VLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVKQRQYNPS 320
VLPL+ LP QQ+RVF P R +VATNVAETSLT+ G+ +V+D G K + YN +
Sbjct: 659 VLPLYAMLPASQQLRVFQDIPDGERLVVVATNVAETSLTIPGIKYVVDTGKQKVKNYNHA 718
Query: 321 SGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKE--FLEATIPEIQRSSLA 378
+GM S ++ IS+ A QR+GRAGRT PG CY LY + Y K+ F E + PEI+ +
Sbjct: 719 TGMASYEIQWISKASASQRSGRAGRTGPGHCYHLYSAAAYGKDELFPEFSEPEIKNIPVD 778
Query: 379 GSVLYLKSLDLPDINILKFDFLDPPSRESLEDALRQLYLIDAIDENGQITDVGRIMAELP 438
G VL LK +++ + F F PP +ESL +A R L +++A+D G+ T +G+ MA+ P
Sbjct: 779 GVVLMLKFMNINKVE--NFPFPTPPDKESLVEAERCLKVLEALDSKGEPTLMGKAMAQYP 836
Query: 439 LEPSLSRTLIEA----NELGCLSQ---------------ALTVAAVLSAEITFRSTR-SK 478
+ P SR L+ N C S+ + T + E + S + +
Sbjct: 837 MSPRHSRLLLTIVKILNSQRCFSRPNFILGYAAAAASALSFTNPFLTQNEFSGESKQDNP 896
Query: 479 DMEGK----RKRQELPDGSGWGDHIQL-------------LQIFESWDRTGYDP-RWCSD 520
D E K RKRQ+ H + LQ+FE +P +C
Sbjct: 897 DSEDKDRQERKRQKKLKAMVREAHTKFSNPSSDALSISRALQLFE----LSENPVEFCRV 952
Query: 521 HELQVRGMKFSKDVRNQLSQIIQKIAKG----------STDVQAKKERKSDPDYRKLR-- 568
+ L ++ M+ +R QL ++I +K S DV+ +SD +L
Sbjct: 953 NSLHLKTMEEMSKLRKQLLRLIFHHSKFCEEFSWKFGVSEDVEEAWRHESDKKPMQLNEE 1012
Query: 569 ----RALCVGYGNQLAERMLHHNG------------YHTVGYRAQLVQVHPFSVLEGDEY 612
+ +C G+ +++A+R+ G Y + + + SV
Sbjct: 1013 ELLGQGICAGWADRVAKRIRAFPGPSKDDKKVRAVHYQSCAFNDTIYLHRSSSVAR---- 1068
Query: 613 GKLPVYVVYHELINTTRPFMRNVSAVDQSWV 643
P +VVY EL++T R +M V++V W+
Sbjct: 1069 -IAPEFVVYSELLHTKRSYMHGVTSVKPGWI 1098
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 154/290 (53%), Gaps = 43/290 (14%)
Query: 14 ELPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQILHRRGY------TRRGAIAVTQ 67
+LPI E EIM A+ N VV++ GETG GK+TQ+ Q L+ G+ R+G I +TQ
Sbjct: 239 DLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRSDRKGIIGITQ 298
Query: 68 PXXXXXXXXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELK 127
P EL + LG EVG+ +R + K IK++TDG+LLRE SD LK
Sbjct: 299 PRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLREVQSDFLLK 358
Query: 128 QYSVIILDEAHERSLNTDILLGLMKRLIK----------------------DRASDLKVL 165
+YSVIILDEAHERSLNTDIL+G++ R+IK D+ S LKV+
Sbjct: 359 RYSVIILDEAHERSLNTDILIGMLSRIIKIRKSLYIEQQEKIRCGLSINPEDKISQLKVV 418
Query: 166 ITSATL---DGLKVSKFFSGC-PVLNIPGTLFPVEKFYSTEHPTNYIESSLRTAIDIHVK 221
+ SATL D + + F P + +P FPV +S +Y+ + + + IH K
Sbjct: 419 LMSATLQLKDFISNRRLFDVIPPAIKVPVRQFPVTVHFSKSTHDDYLGQAYKKVMSIHKK 478
Query: 222 ESPGDVLIFMTGKDDIDKMVSKLE-----------ERIQNLEEGSCMDAL 260
G +L+F+TG+ ++D + KL+ E+++ E GS + +
Sbjct: 479 LPQGGILVFVTGQREVDYLCKKLQRASKQQTDKKTEKVEGDENGSSQEVV 528
>Os01g0767700 Similar to DEIH-box RNA/DNA helicase
Length = 1223
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 191/383 (49%), Gaps = 26/383 (6%)
Query: 195 VEKFYSTEHP----TNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQN 250
+ K+ +T +P T IE LR I V + G +L+F+ G +DI++ +L
Sbjct: 550 LNKYLATINPEHIDTVLIERLLRK---ICVDSNEGAILVFLPGWEDINQTRERL------ 600
Query: 251 LEEGSCMDA---LVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVI 307
L D+ LVL LH +P +Q +VF P R+ I++TN+AET++T+D VVFVI
Sbjct: 601 LASPFFQDSSKFLVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVI 660
Query: 308 DCGYVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEA 367
D G +K++ Y+P + + +L +S+ A QR GRAGR +PG CY LY LE
Sbjct: 661 DSGRMKEKSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYS-RFRAASLLEY 719
Query: 368 TIPEIQRSSLAGSVLYLKSLDLPDINILKF--DFLDPPSRESLEDALRQLYLIDAIDENG 425
IPEI+R + L +K LD P+ I F LDPP E++ +A+ L + A+ ++
Sbjct: 720 QIPEIKRMPIEELCLQVKLLD-PNCRIADFLRKTLDPPIPETVRNAITVLQDLGALTQDE 778
Query: 426 QITDVGRIMAELPLEPSLSRTLIEANELGCLSQALTVAAVLSAEITFRSTRSKDMEGKRK 485
Q+T++G + LP+ PS S+ L+ + CL ALT+A F + D +
Sbjct: 779 QLTELGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKRAA 838
Query: 486 RQELPDGS---GWGDHIQLLQIFESWDRT---GYDPRWCSDHELQVRGMKFSKDVRNQLS 539
++ S G+ D + ++ + W R G + ++CS + + M ++R QL
Sbjct: 839 AAKVELASLYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQ 898
Query: 540 QIIQKIAKGSTDVQAKKERKSDP 562
+ + D A DP
Sbjct: 899 NELAQRGFVPVDASACSLNARDP 921
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 18/203 (8%)
Query: 14 ELPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQIL--HRRGYTRRGAIAVTQPXXX 71
+LPIS ++D I + +E + VV++ GETG GK+TQ+ Q + H G I TQP
Sbjct: 205 KLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQPRRI 264
Query: 72 XXXXXXXXXXQELSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLS--------- 122
E +GD VGY IR E + + + I + T+GVLLR +
Sbjct: 265 SAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVTNISKEQ 324
Query: 123 ------DPELKQYSVIILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKV 176
D + + II+DE HER +D +L +++ L+ L++++ SAT+D +
Sbjct: 325 NQKRSFDDAVTGITHIIVDEIHERDRFSDFMLAILRDLLP-LYPHLRLVLMSATIDAERF 383
Query: 177 SKFFSGCPVLNIPGTLFPVEKFY 199
S +FSGCP + +PG PV+ FY
Sbjct: 384 SNYFSGCPFIQVPGFTHPVKTFY 406
>Os04g0432300 Double-stranded RNA binding domain containing protein
Length = 1114
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 235/535 (43%), Gaps = 54/535 (10%)
Query: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQIL-------HRRGYTRRGAIAVTQ 67
LPIS +D + ++ N V+VV GETG GK+TQ+ Q + GY +I TQ
Sbjct: 589 LPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESELGGYC---SIVCTQ 645
Query: 68 PXXXXXXXXXXXXXQEL--SVPLGDE--VGYAIRFEDRTSEKTCIKYLTDGVLLRESLSD 123
P E S P + VGY +R + +E+T + + T G+LLR+ +
Sbjct: 646 PRRIAAISVAERVSSERCESSPGSKDSLVGYQVRLDSARNERTKLLFCTTGILLRKLSGN 705
Query: 124 PELKQYSVIILDEAHERSL----NTDILLGLMKRLIKDRASD----LKVLITSATLDGLK 175
+L + +++DE HER++ D + + L++ R++ LKV++ SAT+D
Sbjct: 706 NDLSDVTHVVVDEVHERTILRKSMNDPDFPVFRSLVEKRSNQPGRKLKVILMSATVDSSL 765
Query: 176 VSKFFSGCPVLNIPGTLFPVEKFYSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKD 235
+++F CPV+N+ G PV + E +E L A+D SP F +
Sbjct: 766 FARYFGDCPVINVEGRTHPVSSHF-LEDVYEKMEYCL--ALD-----SPASGAYFQQHGE 817
Query: 236 DIDKMVSKLEER--IQNLEEGSCMDALVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATN- 292
S + R +NL S D VL + P + + + N
Sbjct: 818 KWKNASSTVNNRRGKKNLVLSSWGDESVL-TEDYVNPHYTTDCYQSYSERTNQNLKRLNE 876
Query: 293 -VAETSLTVDGVVFVI-DCGYVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGK 350
V + L D + ++ +C + P G+ +D++ I R+ A R GR
Sbjct: 877 DVIDFDLLEDLICYIDENCPPGAVLVFLP--GVAEIDML-IDRLSASVRFGRESSDWILP 933
Query: 351 CYRLYPISIYQKEFLEA-----TIPEIQRSSLAGSVLYLKSLDLPDINILKFDFLDPPSR 405
+ L + +K F +PE+ R L L +KSL L I ++PP
Sbjct: 934 LHSLLAPTDQRKVFQSPPENIRKVPEMLRMPLTELCLQIKSLHLGGIKSFLLKAIEPPKE 993
Query: 406 ESLEDALRQLYLIDAIDENGQITDVGRIMAELPLEPSLSRTLIEANELGCLSQALTVAAV 465
E++ A+ LY + A + + +++ +G +A+LP++ + + ++ GCLS L+VAA
Sbjct: 994 EAISSAIDLLYQVGAFEGHEELSPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSVAAF 1053
Query: 466 LSAEITFRSTRSKDMEGKRKRQELP----DGSG------WGDHIQLLQIFESWDR 510
LS + F S + + ++ + L DGS DH+ ++ + W R
Sbjct: 1054 LSYKSPFISPKDEKQNVEKAKASLMNENLDGSASTADNKQSDHLLMVIAYNKWSR 1108
>Os03g0282700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 404
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 189/417 (45%), Gaps = 53/417 (12%)
Query: 24 IMAAVEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPXXXXXXXXXXXXXQE 83
I+ +E + VVVV GSGKS+ L + L GY G + QP +E
Sbjct: 24 ILEYLEDHRVVVVSAAPGSGKSSVLPRCLAESGY---GPVLCAQPRHLAAFVAMAKVGEE 80
Query: 84 LSVPLGDEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLSDPELKQYSVIILDEAHERSLN 143
D E T + L D R S P L Y +++DEAH+R+L
Sbjct: 81 W---------------DSDIEFTTTRQLLD----RFSSPAPVLAGYGAVVIDEAHDRTLG 121
Query: 144 TDILLGLMKRLIK---DRASDLKVLITSA--TLDGLKVSKFFSGCPVLNIPGTLFPVEKF 198
TD+LLG++K + KV++ +A DG+ +S FF G PV++IP VE
Sbjct: 122 TDVLLGMVKAALATGTTMGGRCKVVVCTAGGPADGM-LSAFFGGAPVVSIPRAAHQVEVR 180
Query: 199 YSTEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEEGSCMD 258
YS + + IH + PGDVL F+ DI + ++L G +
Sbjct: 181 YSRGPVLDMAAAVADEVAAIHASQPPGDVLAFLPENADIIGVHARL--------LGLPVP 232
Query: 259 AL-VLPLHGSLPPE--QQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGYVKQR 315
L V +H +LP E + + +P P RR ++AT+VAET++ V G+ +V+D G V ++
Sbjct: 233 GLAVRYVHDNLPAELIDIMLINSPVPDGRRRVVLATDVAETAVLVHGITYVVDTGLVSEQ 292
Query: 316 QYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQKEFLEATIPEIQRS 375
V+IS+ A RA AG + PG+C+RLY Y + E TIP I++
Sbjct: 293 P-----------PVRISKEAAAARAAIAGFSGPGRCHRLYQPEEYD-DLDEHTIPHIRQD 340
Query: 376 SLAGSVLYLKSLDLPDINILKFDFLDPPSRES-LEDALRQLYLIDAIDENGQITDVG 431
A + D I F+ DP + L++ QL +D+ G ++D G
Sbjct: 341 GAAVRFALMVKRHAAD-GIPGFEIFDPALEPAVLKNVFGQLVNGGYLDKLGNLSDKG 396
>Os11g0196100
Length = 333
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 77/292 (26%)
Query: 28 VEANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIAVTQPXXXXXXXXXXXXXQELSVP 87
V + VV+V G+GKS+Q+ ++LH G+
Sbjct: 6 VALHLVVLVDAGPGTGKSSQIPRLLHAAGH------------------------------ 35
Query: 88 LGDEVGYAIRFEDRTSEK-TCIKYLTDGVLLRESLSDPELKQYSVIILDEAHERSLNTDI 146
G VGY++ +DR+S+ T +KY+T G LLR+ +DP L +Y +++D+AH+ T +
Sbjct: 36 -GCVVGYSVPLDDRSSDADTVVKYITHGALLRDLAADPLLTRYGAVVVDDAHDGMAITGV 94
Query: 147 LLGLMKRLIKDRASDLKVLIT---SATLDGLKVSKFFSGCPV----LNIPGTLFPVEKFY 199
+L +K R DL+V++ +TL V FFSG + L +++ Y
Sbjct: 95 VLSCVKAAAARRL-DLRVVVCLNHYSTLCKGVVHGFFSGSGMDGKELWFRTYSGLIDQHY 153
Query: 200 STEHPTNYIESSLRTAIDIHVKESPGDVLIFMTGKDDIDKMVSKLEERIQNLEEGSCMDA 259
E T+Y+ +++ IH E PGD+L+F+ G D++ E + L
Sbjct: 154 LPEPVTDYLGAAVDAVCRIHTTEPPGDLLVFLPGCTDVEAA----EHALNGL-------- 201
Query: 260 LVLPLHGSLPPEQQVRVFAPAPPNCRRFIVATNVAETSLTVDGVVFVIDCGY 311
R+ ++AT+VA S+ VDG+ +++D GY
Sbjct: 202 -------------------------RKVVLATDVAVCSVFVDGIKYIVDSGY 228
>Os01g0118100 Similar to Maleless protein
Length = 164
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 110 YLTDGVLLRESLSDPELKQYSVIILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSA 169
+ T GVLLR L D LK + +I+DE HER +N D LL ++K L+ R +L++++ SA
Sbjct: 10 FCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRP-ELRLVLMSA 68
Query: 170 TLDGLKVSKFFSGCPVLNIPGTLFPV 195
TL+ S +F G P+++IPG +PV
Sbjct: 69 TLNAELFSSYFGGAPMIHIPGFTYPV 94
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,655,394
Number of extensions: 924276
Number of successful extensions: 2915
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2857
Number of HSP's successfully gapped: 17
Length of query: 708
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 600
Effective length of database: 11,396,689
Effective search space: 6838013400
Effective search space used: 6838013400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)