BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0140400 Os11g0140400|J090022D11
(118 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0140400 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-trans... 237 1e-63
Os12g0136900 Similar to Calcium-transporting ATPase 4, plas... 222 5e-59
Os01g0939100 Similar to Calmodulin-stimulated calcium-ATPase 206 3e-54
Os03g0203700 Similar to Calcium-transporting ATPase 2, plas... 199 4e-52
Os12g0586600 Similar to Plasma membrane Ca2+-ATPase 195 6e-51
Os05g0495600 Similar to Calcium-transporting ATPase 4, plas... 195 7e-51
Os03g0616400 Similar to Plasma membrane Ca2+-ATPase 190 2e-49
Os10g0418100 Similar to Calcium-transporting ATPase 8, plas... 157 1e-39
Os04g0605500 Similar to Calcium-transporting ATPase 8, plas... 154 1e-38
Os02g0176700 Similar to Potential calcium-transporting ATPa... 145 6e-36
Os03g0281600 Similar to Ca2+-ATPase 97 2e-21
Os03g0730800 Similar to Calcium-transporting ATPase 3, endo... 89 8e-19
AK110089 79 5e-16
>Os11g0140400 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein
Length = 118
Score = 237 bits (605), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV
Sbjct: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNIIVFI 118
IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNIIVFI
Sbjct: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNIIVFI 118
>Os12g0136900 Similar to Calcium-transporting ATPase 4, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 4)
Length = 1039
Score = 222 bits (565), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/114 (95%), Positives = 110/114 (96%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV
Sbjct: 730 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNI 114
IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACI G +
Sbjct: 790 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPL 843
>Os01g0939100 Similar to Calmodulin-stimulated calcium-ATPase
Length = 1043
Score = 206 bits (525), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/116 (82%), Positives = 110/116 (94%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
MARSLPLDKHTLVTNLRGMF+EVV+VTGDGTNDAPALHEADIGLAMGIAGTEVAKE+ADV
Sbjct: 733 MARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADV 792
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNIIV 116
I++DDNF+TIINVA+WGR+VYINIQKFVQFQLTVN+VAL++NF+SA TG + +
Sbjct: 793 IIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTI 848
>Os03g0203700 Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 2)
Length = 1019
Score = 199 bits (506), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/114 (81%), Positives = 105/114 (92%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
MARS PLDKHTLV +LR FDEVV+VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV
Sbjct: 730 MARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNI 114
I+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+TG +
Sbjct: 790 IILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPL 843
>Os12g0586600 Similar to Plasma membrane Ca2+-ATPase
Length = 1020
Score = 195 bits (496), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 103/110 (93%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
MARS PLDKHTLV +LR F+EVV+VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV
Sbjct: 730 MARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 110
I+LDDNF+TI+ VA+WGR+VY+NIQKFVQFQLTVN+VAL++NF SAC TG
Sbjct: 790 IILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTG 839
>Os05g0495600 Similar to Calcium-transporting ATPase 4, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 4)
Length = 1038
Score = 195 bits (495), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 105/114 (92%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
+ARSLP+DK+ LVT+L+ M+ EVV+VTGDGTNDAPALHE+DIGLAMGI GTEVAKESADV
Sbjct: 729 IARSLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALHESDIGLAMGITGTEVAKESADV 788
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNI 114
I++DDNF TI+NVARWGRAVY+NIQKFVQFQLTVNIVAL++NFVSACI G +
Sbjct: 789 IIMDDNFETIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFVSACIIGSAPL 842
>Os03g0616400 Similar to Plasma membrane Ca2+-ATPase
Length = 1033
Score = 190 bits (483), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/114 (77%), Positives = 104/114 (91%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
+ARS PLDKHTLV +LR F+EVV+VTGDGTNDAPAL EADIGLAMGIAGTEVAKESADV
Sbjct: 734 LARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKESADV 793
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNI 114
++LDDNF+TI+ VA+WGR+VY+NIQKFVQFQLTVN+VAL++NF SAC TG+ +
Sbjct: 794 VILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTSACFTGDAPL 847
>Os10g0418100 Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 8)
Length = 458
Score = 157 bits (398), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 90/111 (81%), Gaps = 1/111 (0%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
MARSLPLDK LV L+ VV+VTGDGTNDAPAL EAD+GL+MG+ GTEVAKES+D+
Sbjct: 157 MARSLPLDKLVLVQRLK-QKGHVVAVTGDGTNDAPALKEADVGLSMGVQGTEVAKESSDI 215
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGE 111
++L+DNF T++ RWGR VY NIQKF+QFQLTVN+ ALVINFVSA TG
Sbjct: 216 VILNDNFDTVVTATRWGRCVYNNIQKFIQFQLTVNVAALVINFVSAVTTGR 266
>Os04g0605500 Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 8)
Length = 1088
Score = 154 bits (389), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 89/110 (80%), Gaps = 1/110 (0%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
M RS P DK LV LR VV+VTGDGTNDAPALHEADIGL+MGI GTEVAKES+D+
Sbjct: 767 MGRSSPNDKLLLVKALRKR-GHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDI 825
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 110
I+LDDNF +++ V RWGR+VY NIQKF+QFQLTVN+ AL+IN V+A +G
Sbjct: 826 IILDDNFASVVRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSG 875
>Os02g0176700 Similar to Potential calcium-transporting ATPase 9, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)
Length = 1029
Score = 145 bits (366), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Query: 1 MARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 60
M RS P DK LV L+ + VV+VTGDGTNDAPALHEADIGLAMGI GTEVAKES+D+
Sbjct: 722 MGRSSPSDKLLLVKALKKKGN-VVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDI 780
Query: 61 IVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 110
I+LDDNF +++ V RWGR+VY NIQKF+QFQLTVN+ AL+IN V+A +G
Sbjct: 781 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAISSG 830
>Os03g0281600 Similar to Ca2+-ATPase
Length = 845
Score = 97.4 bits (241), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 2 ARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 61
+R+ P K +V L+ EVV++TGDG NDAPAL ADIG+AMGI GTEVAKE++D++
Sbjct: 709 SRAEPKHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMV 767
Query: 62 VLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACI 108
+ DDNF+TI+ GR++Y N++ F+++ ++ NI + F+++ +
Sbjct: 768 LADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTSAL 814
>Os03g0730800 Similar to Calcium-transporting ATPase 3, endoplasmic
reticulum-type (EC 3.6.3.8)
Length = 755
Score = 88.6 bits (218), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 2 ARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 61
+R P K LV L+ + +EVV++TGDG NDAPAL +ADIG+AMG +GT VAK ++D++
Sbjct: 667 SRVEPSHKRMLVEALQ-LHNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMV 724
Query: 62 VLDDNFTTIINVARWGRAVYINIQKFVQF 90
+ DDNF TI+ GRA+Y N ++F+++
Sbjct: 725 LADDNFATIVAAVSEGRAIYNNTKQFIRY 753
>AK110089
Length = 1111
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 1 MARSLPLDKHTLVTNL--RGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESA 58
+AR P K ++ L RG F ++TGDG ND+P+L +D+G+AMG+ G++VAK+++
Sbjct: 733 IARCAPQTKVRMIEALHRRGKF---CAMTGDGVNDSPSLKMSDVGIAMGMNGSDVAKDAS 789
Query: 59 DVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGEGNIIVF 117
D+++ DDNF +I N GR + NI KFV L N+ + + E + VF
Sbjct: 790 DIVLTDDNFASIGNAIEEGRRMADNITKFVCHLLAQNVAQASVLLIGLAFKDETGLSVF 848
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,582,836
Number of extensions: 123110
Number of successful extensions: 479
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 491
Number of HSP's successfully gapped: 13
Length of query: 118
Length of database: 17,035,801
Length adjustment: 85
Effective length of query: 33
Effective length of database: 12,597,611
Effective search space: 415721163
Effective search space used: 415721163
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)