Os10g0418100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8).
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Os10g0418100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 317.57 | 0.837 | 4.6 | -1.22 | 0.275 | -3.96 | -1.29 | 8.69 | -0.546 | 20.1 | 51.11 | 237 | -- | -- |
| 330.29 | 0.846 | 4.57 | -0.955 | 0.324 | -2.29 | -1.12 | -- | -0.582 | 19.9 | 51.7 | 208 | -- | -- |
| 322.11 | 0.836 | 4.61 | -1.17 | 0.302 | -3.81 | -- | 8.56 | -0.544 | 20.7 | 51 | 237 | -- | -- |
| 326.71 | 0.842 | 4.55 | -0.937 | 0.309 | -1.8 | -- | -- | -0.531 | 20.4 | 53.51 | 296 | -- | -- |
| 325.55 | 0.84 | 4.6 | -1.23 | -- | -3.9 | -- | 8.91 | -0.543 | -- | 51.33 | 301 | -- | -- |
| 376.14 | 0.909 | 4.59 | -0.781 | 0.623 | -- | -0.604 | -- | -0.659 | 19.3 | -- | -- | -- | -- |
| 377.13 | 0.909 | 4.59 | -0.767 | 0.622 | -- | -- | -- | -0.66 | 19.3 | -- | -- | -- | -- |
| 331.38 | 0.848 | 4.55 | -0.967 | -- | -1.95 | -- | -- | -0.546 | -- | 53.87 | 296 | -- | -- |
| 350.04 | 0.871 | 4.54 | -- | 0.326 | -1.67 | -- | -- | -0.456 | 20.7 | 53.78 | 296 | -- | -- |
| 397.68 | 0.932 | 4.57 | -0.778 | -- | -- | -- | -- | -0.671 | -- | -- | -- | -- | -- |
| 392.64 | 0.927 | 4.57 | -- | 0.629 | -- | -- | -- | -0.575 | 19.2 | -- | -- | -- | -- |
| 355.67 | 0.878 | 4.53 | -- | -- | -1.81 | -- | -- | -0.449 | -- | 53.96 | 296 | -- | -- |
| 413.64 | 0.949 | 4.56 | -- | -- | -- | -- | -- | -0.585 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 312.22 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 4 |
| 3 | 312.72 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 4 | 312.83 | temperature | 30 | 270 | > th | dose dependent | rect. | 14 | 19 |
| 7 | 312.90 | humidity | 80 | 90 | < th | dose dependent | rect. | 16 | 4 |
| 47 | 314.72 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 48 | 314.73 | temperature | 30 | 270 | > th | dose dependent | sin | 13 | NA |
| 57 | 315.56 | humidity | 70 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 81 | 316.46 | humidity | 60 | 270 | < th | dose independent | rect. | 14 | 19 |
| 84 | 316.53 | humidity | 70 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 85 | 316.59 | humidity | 60 | 270 | < th | dose independent | rect. | 14 | 4 |
| 86 | 316.63 | humidity | 70 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 100 | 316.78 | humidity | 60 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 128 | 317.53 | humidity | 60 | 270 | < th | dose independent | rect. | 14 | 6 |
| 163 | 317.77 | humidity | 70 | 90 | < th | dose independent | rect. | 16 | 3 |
| 191 | 318.27 | humidity | 50 | 270 | > th | dose independent | sin | 5 | NA |
| 196 | 318.42 | humidity | 60 | 270 | < th | dose dependent | sin | 16 | NA |
| 219 | 318.91 | humidity | 70 | 10 | < th | dose independent | rect. | 17 | 3 |
| 232 | 318.95 | humidity | 80 | 90 | < th | dose dependent | sin | 13 | NA |
| 278 | 319.77 | humidity | 70 | 90 | < th | dose dependent | sin | 11 | NA |
| 284 | 319.88 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 286 | 319.89 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 287 | 319.93 | humidity | 50 | 270 | > th | dose independent | sin | 9 | NA |
| 332 | 320.40 | humidity | 60 | 270 | < th | dose independent | sin | 13 | NA |
| 351 | 320.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 10 |
| 367 | 320.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 12 |
| 388 | 320.99 | humidity | 80 | 10 | < th | dose dependent | sin | 12 | NA |
| 408 | 321.09 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 3 |
| 433 | 321.44 | temperature | 30 | 270 | > th | dose independent | rect. | 14 | 19 |
| 437 | 321.57 | humidity | 50 | 270 | > th | dose independent | no | NA | NA |
| 513 | 322.09 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 526 | 322.16 | humidity | 50 | 270 | < th | dose dependent | sin | 9 | NA |
| 527 | 322.17 | temperature | 30 | 90 | > th | dose independent | rect. | 16 | 17 |
| 590 | 322.46 | humidity | 50 | 270 | < th | dose independent | sin | 9 | NA |
| 607 | 322.60 | humidity | 50 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 660 | 322.80 | humidity | 50 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 674 | 322.91 | humidity | 50 | 270 | < th | dose dependent | sin | 4 | NA |
| 688 | 323.02 | humidity | 60 | 270 | > th | dose independent | sin | 14 | NA |
| 713 | 323.22 | radiation | 20 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 732 | 323.27 | humidity | 50 | 270 | < th | dose independent | sin | 5 | NA |
| 733 | 323.28 | temperature | 30 | 90 | > th | dose independent | sin | 12 | NA |
| 800 | 323.76 | humidity | 50 | 270 | < th | dose dependent | no | NA | NA |
| 980 | 323.90 | temperature | 30 | 270 | > th | dose independent | sin | 14 | NA |