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Os12g0586600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Plasma membrane Ca2+-ATPase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0181) R2 : 0.00318
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0459 (0.038) R2dN8 : 0.00411 R2N8 : 0.00318
σ : 0.34
deviance : 53.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.99 0.244 12.4 0.159 0.662 -0.268 0.288 0.469 0.0437 24 70.1 267 -- --
27.44 0.244 12.4 0.188 0.655 -0.231 0.388 -- 0.0449 24 71 267 -- --
27.29 0.243 12.4 0.139 0.668 -0.26 -- 0.608 0.0374 23.9 70.22 249 -- --
28.21 0.247 12.4 0.181 0.658 -0.244 -- -- 0.051 24 71.69 267 -- --
43.65 0.308 12.4 0.152 -- -0.473 -- -0.111 0.0408 -- 72.22 935 -- --
29.33 0.254 12.4 0.224 0.594 -- 0.389 -- 0.0673 23 -- -- -- --
29.97 0.256 12.4 0.208 0.593 -- -- -- 0.0663 22.9 -- -- -- --
43.5 0.307 12.4 0.159 -- -0.499 -- -- 0.0396 -- 74.76 915 -- --
29.06 0.251 12.4 -- 0.667 -0.257 -- -- 0.0346 0.0569 71 267 -- --
51.78 0.336 12.4 0.221 -- -- -- -- 0.0704 -- -- -- -- --
31.11 0.261 12.4 -- 0.595 -- -- -- 0.0431 22.9 -- -- -- --
44.21 0.31 12.4 -- -- -0.514 -- -- 0.0145 -- 74.75 923 -- --
53.07 0.34 12.4 -- -- -- -- -- 0.0459 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.89 wind 9.0 270 < th dose independent rect. 11 18
2 21.91 wind 1.0 10 > th dose independent rect. 6 6
3 21.96 temperature 10.0 10 > th dose dependent rect. 6 6
4 21.98 temperature 15.0 270 > th dose independent rect. 24 16
5 22.00 temperature 10.0 270 > th dose dependent rect. 5 6
6 22.01 temperature 10.0 270 > th dose independent rect. 5 6
7 22.01 atmosphere 995.0 270 > th dose independent rect. 5 6
8 22.01 atmosphere 1015.0 270 < th dose independent rect. 5 6
9 22.01 precipitation 0.1 270 < th dose independent rect. 5 6
10 22.01 temperature 10.0 270 > th dose independent rect. 11 18
11 22.01 precipitation 0.1 270 < th dose dependent rect. 5 6
13 22.03 wind 1.0 10 > th dose independent rect. 6 8
14 22.04 humidity 50.0 270 > th dose independent rect. 5 6
16 22.05 wind 9.0 270 < th dose independent rect. 5 6
17 22.05 wind 9.0 10 < th dose independent rect. 12 18
18 22.09 wind 9.0 10 < th dose independent rect. 14 16
19 22.09 atmosphere 1015.0 10 < th dose independent rect. 12 18
22 22.14 temperature 10.0 10 > th dose independent rect. 6 8
24 22.14 atmosphere 995.0 10 > th dose independent rect. 6 8
25 22.14 atmosphere 1015.0 10 < th dose independent rect. 6 8
26 22.14 precipitation 0.1 10 < th dose independent rect. 6 8
27 22.14 wind 9.0 270 < th dose independent rect. 24 16
28 22.14 temperature 10.0 10 > th dose independent rect. 14 16
29 22.14 precipitation 0.1 10 < th dose dependent rect. 6 8
30 22.16 radiation 30.0 270 < th dose independent rect. 15 9
31 22.16 radiation 40.0 10 < th dose independent rect. 14 16
32 22.18 temperature 10.0 10 > th dose independent rect. 6 6
34 22.18 atmosphere 995.0 10 > th dose independent rect. 6 6
35 22.18 atmosphere 1015.0 10 < th dose independent rect. 6 6
36 22.18 precipitation 0.1 10 < th dose independent rect. 6 6
37 22.18 temperature 10.0 10 > th dose independent rect. 12 18
38 22.18 precipitation 0.1 10 < th dose dependent rect. 6 6
46 22.22 temperature 10.0 270 > th dose independent rect. 16 8
50 22.22 atmosphere 1015.0 270 < th dose independent rect. 24 16
52 22.23 precipitation 0.1 270 < th dose independent rect. 16 8
54 22.23 precipitation 0.1 270 < th dose dependent rect. 16 8
55 22.24 temperature 10.0 1440 > th dose independent rect. 7 6
58 22.24 atmosphere 995.0 1440 > th dose independent rect. 7 6
60 22.24 temperature 10.0 1440 > th dose independent rect. 13 18
63 22.24 atmosphere 1015.0 270 < th dose independent rect. 11 18
66 22.26 atmosphere 1015.0 10 < th dose independent rect. 14 16
76 22.30 radiation 1.0 270 < th dose independent rect. 23 7
84 22.32 humidity 50.0 10 > th dose independent rect. 6 6
85 22.32 radiation 1.0 10 > th dose independent rect. 6 8
86 22.33 wind 9.0 270 < th dose independent rect. 16 8
88 22.34 radiation 1.0 10 > th dose independent rect. 6 6
93 22.36 wind 9.0 10 < th dose independent rect. 6 6
94 22.36 temperature 10.0 1440 > th dose independent rect. 7 8
98 22.36 temperature 10.0 1440 > th dose independent rect. 15 16
101 22.36 radiation 1.0 270 < th dose dependent rect. 23 7
102 22.36 temperature 10.0 10 > th dose dependent rect. 6 8
103 22.36 radiation 40.0 270 < th dose dependent rect. 15 9
114 22.42 wind 9.0 10 < th dose independent rect. 6 8
121 22.43 precipitation 0.1 270 < th dose independent rect. 24 16
123 22.43 precipitation 0.1 270 < th dose dependent rect. 24 16
124 22.43 temperature 10.0 30 > th dose dependent rect. 12 18
129 22.45 atmosphere 995.0 270 > th dose independent rect. 24 16
130 22.45 precipitation 0.1 270 < th dose independent rect. 11 18
133 22.45 precipitation 0.1 270 < th dose dependent rect. 11 18
143 22.49 atmosphere 1015.0 270 < th dose independent rect. 23 6
149 22.50 radiation 1.0 270 < th dose dependent sin 8 NA
160 22.53 humidity 50.0 270 > th dose dependent rect. 23 6
165 22.56 atmosphere 995.0 270 > th dose independent rect. 11 18
169 22.59 temperature 15.0 270 > th dose independent rect. 23 6
174 22.60 wind 9.0 270 < th dose independent rect. 23 6
176 22.60 temperature 30.0 270 < th dose independent rect. 23 6
177 22.60 humidity 50.0 270 > th dose independent rect. 23 6
180 22.60 atmosphere 995.0 270 > th dose independent rect. 23 6
187 22.60 temperature 10.0 270 > th dose independent rect. 5 18
188 22.60 precipitation 0.1 270 < th dose independent rect. 5 18
192 22.60 precipitation 0.1 270 < th dose dependent rect. 5 18
194 22.61 radiation 1.0 90 > th dose independent rect. 4 10
208 22.62 precipitation 0.1 30 < th dose independent rect. 12 18
210 22.62 precipitation 0.1 30 < th dose dependent rect. 12 18
221 22.65 radiation 1.0 270 < th dose dependent rect. 23 16
232 22.68 humidity 50.0 10 > th dose independent rect. 6 8
238 22.69 radiation 1.0 270 > th dose independent sin 8 NA
239 22.69 radiation 1.0 270 < th dose independent sin 8 NA
244 22.69 humidity 50.0 270 > th dose independent rect. 24 15
267 22.73 atmosphere 995.0 270 > th dose independent rect. 16 8
275 22.73 radiation 40.0 30 < th dose independent rect. 12 18
285 22.75 wind 1.0 270 > th dose independent rect. 5 6
319 22.76 radiation 1.0 270 < th dose independent rect. 23 16
321 22.76 atmosphere 995.0 30 > th dose independent rect. 12 18
323 22.77 atmosphere 995.0 10 > th dose independent rect. 14 16
327 22.77 temperature 10.0 10 > th dose dependent rect. 14 16
334 22.78 precipitation 0.1 10 < th dose independent rect. 14 16
339 22.78 precipitation 0.1 10 < th dose dependent rect. 14 16
341 22.79 precipitation 0.1 270 < th dose independent rect. 23 6
345 22.79 wind 9.0 270 < th dose independent rect. 5 18
346 22.79 precipitation 0.1 270 < th dose dependent rect. 23 6
365 22.82 humidity 50.0 270 > th dose independent rect. 16 8
371 22.84 wind 1.0 270 > th dose independent rect. 16 8
394 22.88 humidity 50.0 270 > th dose dependent rect. 5 6
450 22.96 radiation 1.0 90 > th dose independent sin 4 NA
492 23.00 temperature 15.0 270 > th dose independent rect. 10 8
495 23.00 precipitation 0.1 270 < th dose independent rect. 17 18
499 23.00 precipitation 0.1 270 < th dose dependent rect. 17 18
542 23.05 wind 5.0 90 < th dose independent rect. 6 19
547 23.06 temperature 10.0 270 > th dose dependent rect. 23 6
551 23.07 wind 9.0 270 < th dose independent rect. 11 6
554 23.08 temperature 15.0 270 > th dose independent rect. 11 6
575 23.10 wind 1.0 270 > th dose independent rect. 11 6
601 23.12 wind 9.0 270 < th dose independent rect. 10 8
604 23.12 wind 9.0 270 < th dose dependent rect. 5 6
628 23.15 precipitation 0.1 270 < th dose independent rect. 18 16
631 23.15 precipitation 0.1 270 < th dose dependent rect. 18 16
633 23.16 radiation 1.0 90 < th dose independent sin 4 NA
649 23.16 humidity 50.0 270 > th dose independent rect. 17 18
661 23.18 atmosphere 1015.0 270 < th dose independent rect. 11 6
666 23.18 wind 1.0 270 > th dose independent rect. 11 18
667 23.18 temperature 10.0 270 > th dose independent rect. 17 18
684 23.19 radiation 1.0 90 < th dose dependent sin 4 NA
705 23.21 precipitation 0.1 270 < th dose independent rect. 11 6
708 23.21 precipitation 0.1 270 < th dose dependent rect. 11 6
713 23.22 humidity 50.0 10 > th dose independent rect. 12 18
715 23.22 temperature 10.0 30 > th dose dependent rect. 1 5
719 23.23 temperature 30.0 270 < th dose independent rect. 5 6
730 23.24 wind 9.0 270 < th dose independent rect. 17 18
741 23.25 humidity 50.0 270 > th dose dependent rect. 1 2
743 23.26 radiation 1.0 90 < th dose independent rect. 3 3
758 23.27 temperature 10.0 270 > th dose independent rect. 1 3
760 23.27 temperature 30.0 270 < th dose independent rect. 1 3
761 23.27 humidity 50.0 270 > th dose independent rect. 1 3
764 23.27 atmosphere 995.0 270 > th dose independent rect. 1 3
765 23.27 atmosphere 1010.0 270 < th dose independent rect. 1 3
767 23.27 radiation 1.0 270 < th dose independent rect. 1 3
772 23.27 wind 9.0 1440 < th dose independent rect. 2 5
774 23.27 temperature 10.0 1440 > th dose independent rect. 2 5
777 23.27 temperature 30.0 1440 < th dose independent rect. 2 5
781 23.27 humidity 50.0 1440 > th dose independent rect. 2 5
788 23.27 atmosphere 995.0 1440 > th dose independent rect. 2 5
789 23.27 radiation 40.0 1440 < th dose independent rect. 2 5
795 23.27 temperature 10.0 1440 > th dose independent rect. 7 19
799 23.27 temperature 10.0 270 > th dose independent rect. 4 21
801 23.27 radiation 1.0 270 < th dose dependent rect. 1 3
808 23.28 wind 9.0 270 < th dose independent rect. 1 3
809 23.28 humidity 90.0 270 < th dose independent rect. 11 6
810 23.28 radiation 40.0 270 < th dose independent rect. 5 6
825 23.29 atmosphere 1015.0 270 < th dose independent rect. 10 8
827 23.29 wind 9.0 270 < th dose independent rect. 18 16
828 23.29 temperature 10.0 270 > th dose independent rect. 18 16
829 23.29 humidity 50.0 270 > th dose independent rect. 18 16
839 23.30 humidity 50.0 10 > th dose independent rect. 14 16
870 23.32 atmosphere 995.0 270 > th dose independent rect. 5 18
875 23.32 wind 9.0 270 < th dose dependent rect. 23 6
893 23.34 wind 1.0 270 > th dose independent rect. 10 8
896 23.34 radiation 20.0 30 < th dose dependent rect. 3 3
916 23.35 precipitation 0.1 270 < th dose independent rect. 1 2
929 23.35 precipitation 0.1 270 < th dose dependent rect. 1 2
942 23.36 atmosphere 995.0 270 > th dose independent rect. 17 18
944 23.36 precipitation 0.1 270 < th dose independent rect. 4 21
947 23.36 radiation 40.0 10 < th dose dependent rect. 14 16
948 23.36 precipitation 0.1 270 < th dose dependent rect. 4 21
965 23.37 atmosphere 995.0 270 > th dose independent rect. 18 16
976 23.38 precipitation 0.1 270 < th dose independent rect. 10 8
983 23.38 precipitation 0.1 270 < th dose dependent rect. 10 8