Os03g0203700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2).
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Os03g0203700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 299.96 | 0.814 | 7.04 | -2.37 | 0.815 | 11.8 | 2.2 | -32.1 | -0.461 | 3.76 | 0.3534 | 300 | -- | -- |
| 343.92 | 0.87 | 6.93 | -1.78 | 0.759 | 0.48 | 2.16 | -- | -0.516 | 3.1 | 0.3534 | 300 | -- | -- |
| 313.99 | 0.825 | 7.03 | -2.38 | 0.835 | 11.3 | -- | -29.9 | -0.475 | 4.15 | 0.3528 | 299 | -- | -- |
| 320.89 | 0.834 | 6.92 | -2.09 | 0.818 | 3.05 | -- | -- | -0.513 | 4.38 | -4.77 | 421 | -- | -- |
| 352.01 | 0.874 | 7.03 | -2.32 | -- | 10.8 | -- | -28.5 | -0.442 | -- | 0.293 | 299 | -- | -- |
| 344.15 | 0.87 | 6.93 | -1.77 | 0.763 | -- | 2.18 | -- | -0.517 | 3.1 | -- | -- | -- | -- |
| 358.77 | 0.887 | 6.93 | -1.82 | 0.796 | -- | -- | -- | -0.531 | 3.73 | -- | -- | -- | -- |
| 354.33 | 0.877 | 6.92 | -2.05 | -- | 3.19 | -- | -- | -0.452 | -- | -4.289 | 421 | -- | -- |
| 427.55 | 0.963 | 6.87 | -- | 0.774 | 2.27 | -- | -- | -0.279 | 4.11 | -4.578 | 301 | -- | -- |
| 393.77 | 0.927 | 6.93 | -1.78 | -- | -- | -- | -- | -0.51 | -- | -- | -- | -- | -- |
| 445.76 | 0.988 | 6.89 | -- | 0.76 | -- | -- | -- | -0.329 | 3.76 | -- | -- | -- | -- |
| 460.1 | 0.999 | 6.88 | -- | -- | 2.21 | -- | -- | -0.263 | -- | -3.475 | 301 | -- | -- |
| 477.69 | 1.02 | 6.89 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 295.30 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 10 |
| 2 | 295.52 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 3 | 295.86 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 6 | 296.72 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 7 | 296.99 | wind | 7.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 8 | 297.06 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 10 | 297.61 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 13 | 298.25 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 14 | 298.48 | wind | 7.0 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 17 | 298.92 | wind | 7.0 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 21 | 299.33 | wind | 5.0 | 90 | < th | dose independent | rect. | 11 | 16 |
| 24 | 299.56 | wind | 7.0 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 35 | 300.43 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 4 | 15 |
| 37 | 300.73 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 44 | 301.32 | wind | 7.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 55 | 301.87 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 17 |
| 57 | 301.92 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 60 | 302.07 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 71 | 302.34 | wind | 7.0 | 90 | < th | dose dependent | sin | 20 | NA |
| 93 | 303.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 117 | 303.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 148 | 304.46 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 172 | 304.75 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 176 | 304.83 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 1 | NA |
| 180 | 304.89 | wind | 1.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 185 | 305.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 216 | 305.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 6 |
| 232 | 305.39 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 16 |
| 235 | 305.41 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 236 | 305.42 | wind | 1.0 | 90 | > th | dose dependent | sin | 21 | NA |
| 249 | 305.52 | wind | 5.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 252 | 305.56 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 254 | 305.57 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 257 | 305.61 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 262 | 305.68 | wind | 9.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 269 | 305.72 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 3 |
| 320 | 306.12 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 324 | 306.14 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 344 | 306.28 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 9 |
| 349 | 306.30 | precipitation | 0.1 | 270 | < th | dose independent | sin | 0 | NA |
| 350 | 306.30 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 0 | NA |
| 353 | 306.30 | wind | 3.0 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 357 | 306.34 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 358 | 306.35 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 366 | 306.39 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 368 | 306.40 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 406 | 306.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 408 | 306.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 421 | 306.79 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 429 | 306.87 | wind | 3.0 | 90 | > th | dose dependent | rect. | 11 | 9 |
| 445 | 306.98 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 12 |
| 448 | 307.00 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 13 | 17 |
| 451 | 307.02 | wind | 5.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 459 | 307.10 | precipitation | 0.1 | 270 | > th | dose independent | sin | 0 | NA |
| 460 | 307.10 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 468 | 307.18 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 471 | 307.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 472 | 307.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 480 | 307.28 | wind | 5.0 | 90 | > th | dose independent | rect. | 22 | 22 |
| 495 | 307.45 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 17 |
| 503 | 307.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 507 | 307.52 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 21 |
| 509 | 307.53 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 18 |
| 515 | 307.54 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 539 | 307.62 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 14 | NA |
| 556 | 307.68 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 566 | 307.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 567 | 307.74 | wind | 3.0 | 90 | > th | dose dependent | rect. | 14 | 23 |
| 577 | 307.85 | wind | 3.0 | 90 | > th | dose dependent | no | NA | NA |
| 579 | 307.87 | wind | 5.0 | 90 | < th | dose independent | sin | 23 | NA |
| 596 | 307.93 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 20 |
| 618 | 307.99 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 624 | 308.03 | precipitation | 0.1 | 270 | > th | dose independent | sin | 16 | NA |
| 635 | 308.06 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 15 | 21 |
| 636 | 308.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 637 | 308.07 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 639 | 308.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 654 | 308.09 | wind | 3.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 660 | 308.12 | radiation | 10.0 | 43200 | < th | dose dependent | sin | 22 | NA |
| 688 | 308.20 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 15 |
| 719 | 308.31 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 725 | 308.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 734 | 308.32 | wind | 3.0 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 735 | 308.33 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 745 | 308.37 | radiation | 10.0 | 43200 | < th | dose dependent | no | NA | NA |
| 746 | 308.37 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 2 | 17 |
| 749 | 308.37 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 2 | 20 |
| 796 | 308.41 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 799 | 308.42 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 800 | 308.43 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 816 | 308.51 | wind | 5.0 | 90 | < th | dose independent | rect. | 13 | 14 |
| 840 | 308.57 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 17 | 23 |
| 848 | 308.61 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 855 | 308.66 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 914 | 308.84 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 931 | 308.92 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 935 | 308.93 | wind | 5.0 | 90 | > th | dose independent | rect. | 16 | 21 |
| 944 | 308.96 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 6 |
| 949 | 308.97 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 954 | 308.98 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 980 | 309.09 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 9 |