Os11g0140400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os11g0140400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.38 | 0.402 | 9.52 | -0.405 | 1.62 | -1.14 | -0.383 | 2.5 | -0.181 | 17.1 | 25.95 | 6529 | -- | -- |
| 80.93 | 0.419 | 9.57 | -0.868 | 1.56 | -1.01 | -0.43 | -- | -0.154 | 16.8 | 25.1 | 13043 | -- | -- |
| 72.31 | 0.396 | 9.5 | -0.37 | 1.58 | -1.12 | -- | 2.54 | -0.0812 | 17 | 26.6 | 7327 | -- | -- |
| 79.51 | 0.415 | 9.58 | -0.996 | 1.53 | -1.07 | -- | -- | -0.232 | 17 | 25.3 | 11402 | -- | -- |
| 200.99 | 0.66 | 9.45 | -0.214 | -- | -1.25 | -- | 2.73 | -0.0261 | -- | 25.5 | 9940 | -- | -- |
| 113.91 | 0.5 | 9.69 | -1.66 | 1.6 | -- | -0.385 | -- | -0.682 | 16.9 | -- | -- | -- | -- |
| 114.27 | 0.501 | 9.69 | -1.66 | 1.6 | -- | -- | -- | -0.684 | 17 | -- | -- | -- | -- |
| 201.86 | 0.662 | 9.58 | -1.08 | -- | -1.16 | -- | -- | -0.284 | -- | 24.7 | 9943 | -- | -- |
| 75.93 | 0.406 | 9.51 | -- | 1.47 | -1.61 | -- | -- | 0.00189 | 16.8 | 20.4 | 25469 | -- | -- |
| 249.23 | 0.738 | 9.67 | -1.72 | -- | -- | -- | -- | -0.725 | -- | -- | -- | -- | -- |
| 187.31 | 0.64 | 9.65 | -- | 1.63 | -- | -- | -- | -0.498 | 16.9 | -- | -- | -- | -- |
| 204.82 | 0.667 | 9.5 | -- | -- | -1.67 | -- | -- | -0.042 | -- | 20.2 | 28537 | -- | -- |
| 327.56 | 0.845 | 9.63 | -- | -- | -- | -- | -- | -0.534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.94 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 13 | 73.16 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 35 | 73.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 10 |
| 66 | 73.54 | humidity | 90 | 43200 | > th | dose dependent | sin | 17 | NA |
| 70 | 73.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 74 | 73.57 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 87 | 73.62 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 103 | 73.69 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 104 | 73.69 | temperature | 25 | 14400 | > th | dose dependent | sin | 18 | NA |
| 114 | 73.71 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 117 | 73.72 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 132 | 73.76 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 18 |
| 140 | 73.78 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 145 | 73.81 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 149 | 73.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 8 |
| 157 | 73.85 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 167 | 73.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 180 | 73.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 196 | 73.96 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 209 | 74.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 212 | 74.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 19 |
| 213 | 74.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 214 | 74.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 215 | 74.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 6 |
| 242 | 74.04 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 272 | 74.08 | humidity | 90 | 43200 | > th | dose independent | sin | 17 | NA |
| 298 | 74.11 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 308 | 74.13 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 321 | 74.15 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 325 | 74.15 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 329 | 74.16 | humidity | 90 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 354 | 74.19 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 400 | 74.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 407 | 74.26 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 445 | 74.27 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 448 | 74.28 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 468 | 74.29 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 480 | 74.29 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 481 | 74.29 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 495 | 74.31 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 499 | 74.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 515 | 74.34 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 521 | 74.35 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 538 | 74.36 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 540 | 74.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 8 |
| 554 | 74.38 | temperature | 25 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 559 | 74.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 569 | 74.39 | temperature | 25 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 574 | 74.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 581 | 74.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 587 | 74.40 | temperature | 20 | 14400 | > th | dose dependent | sin | 13 | NA |
| 608 | 74.42 | temperature | 25 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 698 | 74.49 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 728 | 74.51 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 737 | 74.52 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 760 | 74.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 20 |
| 761 | 74.53 | temperature | 25 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 778 | 74.55 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 804 | 74.56 | temperature | 25 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 852 | 74.59 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 887 | 74.60 | temperature | 20 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 893 | 74.61 | temperature | 25 | 14400 | < th | dose independent | sin | 4 | NA |
| 906 | 74.62 | temperature | 25 | 14400 | > th | dose independent | sin | 4 | NA |
| 922 | 74.62 | temperature | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 965 | 74.64 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |