BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0575600 Os10g0575600|AK071939
(882 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0575600 Homeodomain-related containing protein 1580 0.0
Os04g0627000 Similar to Roc1 544 e-154
Os02g0674800 Similar to OCL1 homeobox protein 313 4e-85
Os04g0569100 Similar to OCL1 homeobox protein 301 2e-81
Os08g0292000 Homeobox domain containing protein 226 6e-59
Os08g0136100 Similar to Roc1 188 2e-47
Os06g0208100 Similar to Homeodomain protein HOX3 182 1e-45
Os09g0526300 Similar to Homeobox protein GLABRA2 (Homeobox-... 175 1e-43
Os01g0788800 Homeodomain-like containing protein 155 2e-37
Os08g0187500 Similar to Roc1 150 4e-36
Os09g0526200 Similar to OCL3 protein 128 2e-29
Os01g0384100 115 1e-25
Os01g0760800 Similar to Homeodomain protein 1 108 2e-23
Os07g0426600 98 3e-20
Os07g0667200 95 2e-19
Os11g0145300 86 9e-17
Os12g0531514 75 3e-13
>Os10g0575600 Homeodomain-related containing protein
Length = 882
Score = 1580 bits (4090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/882 (88%), Positives = 781/882 (88%)
Query: 1 MRRMFGDCQVLXXXXXXXXXXXXXXXXXXXPLIPNPALAGFMSSSAAMPFHHFSNAAATL 60
MRRMFGDCQVL PLIPNPALAGFMSSSAAMPFHHFSNAAATL
Sbjct: 1 MRRMFGDCQVLSSMAAMAGAASSADALFASPLIPNPALAGFMSSSAAMPFHHFSNAAATL 60
Query: 61 IPKEEGLMGGLHVAKDEGMDLEMDMELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPP 120
IPKEEGLMGGLHVAKDEGMDLEMDMELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPP
Sbjct: 61 IPKEEGLMGGLHVAKDEGMDLEMDMELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPP 120
Query: 121 DAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF 180
DAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF
Sbjct: 121 DAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF 180
Query: 181 WFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEE 240
WFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEE
Sbjct: 181 WFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEE 240
Query: 241 QQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAXXXXXXXXXXXXXNVY 300
QQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISA NVY
Sbjct: 241 QQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVY 300
Query: 301 SRHFAEQAPVMGCGDLIPPPVVPQHDXXXXXXXXXXXPVQEQDKQLVVDLAATAADQLAR 360
SRHFAEQAPVMGCGDLIPPPVVPQHD PVQEQDKQLVVDLAATAADQLAR
Sbjct: 301 SRHFAEQAPVMGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR 360
Query: 361 MCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSIN 420
MCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSIN
Sbjct: 361 MCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSIN 420
Query: 421 LVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAARE 480
LVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAARE
Sbjct: 421 LVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAARE 480
Query: 481 VVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWV 540
VVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWV
Sbjct: 481 VVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWV 540
Query: 541 EHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIADLGVIRTPE 600
EHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIADLGVIRTPE
Sbjct: 541 EHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIADLGVIRTPE 600
Query: 601 ARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTEPGQPSGVILTAV 660
ARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTEPGQPSGVILTAV
Sbjct: 601 ARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTEPGQPSGVILTAV 660
Query: 661 STSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASN 720
STSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASN
Sbjct: 661 STSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASN 720
Query: 721 SSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGXXXXXXXXXX 780
SSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLG
Sbjct: 721 SSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPS 780
Query: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADELLPPNGCLLTVGMQVLASAVP 840
ADELLPPNGCLLTVGMQVLASAVP
Sbjct: 781 PAAAPTISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVP 840
Query: 841 SAKLNLSSVTAINSHVCNAIHQITXXXXXXXXXXXXEPASDQ 882
SAKLNLSSVTAINSHVCNAIHQIT EPASDQ
Sbjct: 841 SAKLNLSSVTAINSHVCNAIHQITAALKSSAGGAGGEPASDQ 882
>Os04g0627000 Similar to Roc1
Length = 784
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/697 (43%), Positives = 430/697 (61%), Gaps = 77/697 (11%)
Query: 86 ELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPPDAAQPSGAAGGNAKKKRYHRHTAHQ 145
E SGS ++DG+ S D D + +P +KKRYHRHT HQ
Sbjct: 79 EFESKSGSENVDGV-SVDDQDPNQRP----------------------RKKRYHRHTQHQ 115
Query: 146 IQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAEN 205
IQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +N LR++N
Sbjct: 116 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDN 175
Query: 206 ENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDELDRLACIATRYG 265
E L+++N R + A+ + CPNCG A L +MS++E LRIENARL++E+DR++ IA +Y
Sbjct: 176 EKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYV 235
Query: 266 GGGGRQPVLSTSALSCISAXXXXXXXXXXXXXNVYSRHFAEQAPVMGCGDL-IPPPVVPQ 324
G +P++ LS A A +AP+ DL + P VP
Sbjct: 236 G----KPMVPFPVLSNPMAAA------------------ASRAPL----DLPVAPYGVPG 269
Query: 325 HDXXXXXXXXXXXPVQ-EQDKQLVVDLAATAADQLARMCRAGEPLW-------VRQRGAE 376
VQ E DK ++V+LA A ++L RM + EPLW E
Sbjct: 270 DMFGGGGAGELLRGVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAME 329
Query: 377 VMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFP 436
++ EE+ARMF + + G R+E +RD+AVVIM NLV+ +DAN++ +F
Sbjct: 330 TLSEEEYARMFPRGLGPKQYG-----LRSEASRDSAVVIMTHANLVEILMDANQYAAVFS 384
Query: 437 SIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSW 496
+IV +A T+++++ G A + +G L +M E Q SPLV RE F RYC NAD G+W
Sbjct: 385 NIVSRAITLEVLSTGVAGNY--NGALQVMSVEFQVPSPLVPTRESYFVRYCKQNAD-GTW 441
Query: 497 AIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVF 556
A+VD + L + V++CRRRPSGC+IQ+MPNGYS+V WVEH+E+ +++ + ++
Sbjct: 442 AVVDVSLDS----LRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRSVHNIY 495
Query: 557 RDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKLSQRMIT 614
+ V SG AFGA RW+ L RQCERLAS +A NI +D+GVI + E R +M+KL++RM+
Sbjct: 496 KLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVV 555
Query: 615 TFCANISASGTQSWTALSDSTQDTIRVTTRKNTE-PGQPSGVILTAVSTSWLPFTHQQVF 673
+FC ++AS WT LS S + +RV TRK+ + PG+P G++L A ++ WLP ++VF
Sbjct: 556 SFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVF 615
Query: 674 ELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESS 733
+ L DE R + +ILSNGG + E+AHIANG NC+SLLR+N+++++ N+ L+LQES
Sbjct: 616 DFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVNSSNSNQSNM-LILQESC 674
Query: 734 THPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLG 770
T GS V++A VDV A+ V ++G DP Y+ LLP G
Sbjct: 675 TDA-SGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 710
>Os02g0674800 Similar to OCL1 homeobox protein
Length = 804
Score = 313 bits (802), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 270/444 (60%), Gaps = 28/444 (6%)
Query: 343 DKQLVVDLAATAADQLARMCRAGEPLWV----RQRGAEVMAVEEHARMFSWPVDGAKQGD 398
D+ + ++LA +A D+L +M + +PLWV EV+ EE+ F P G K
Sbjct: 308 DRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSF-LPCIGMKPA- 365
Query: 399 GGAVARAEGTRDNAVVIM-NSINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHL 457
G V+ E +R++ +VI+ NS+ LV+ +D +W ++F ++ KA ++ ++ G A
Sbjct: 366 -GYVS--EASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSR- 421
Query: 458 GSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASV-- 515
+G LLLM+AE+Q LSPLV REV F R+C A EG+WA+VD +G +
Sbjct: 422 -NGALLLMKAELQVLSPLVPIREVTFLRFCKQLA-EGAWAVVDVSIDGLVRDHNSGTAPT 479
Query: 516 ---VRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWL 572
V+CRR PSGC++QD PNGY +V WVEH E +E + ++R + SG AFGA RWL
Sbjct: 480 GGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEY--DEASVHQLYRPLLRSGLAFGARRWL 537
Query: 573 SILQRQCERLASEL--ARNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTA 630
+ LQRQCE LA + A A+ + E + +M+KL++RM FCA +SAS + W+
Sbjct: 538 ATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSK 597
Query: 631 LSDSTQ---DTIRVTTRKN-TEPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLE 686
L +T + +RV RK+ +EPG+P GV+L+A ++ W+P +++F L DEQ R + +
Sbjct: 598 LDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWD 657
Query: 687 ILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFAT 746
ILSNGG + E+ IA G N +SLLR +A S ++Q+ L+LQE+ T GS+VV+A
Sbjct: 658 ILSNGGPMQEMTQIAKGQRDGNSVSLLRASAVS-ANQSSMLILQETCTDA-SGSIVVYAP 715
Query: 747 VDVDAIQVTMSGEDPSYIPLLPLG 770
VD+ A+Q+ M+G D +Y+ LLP G
Sbjct: 716 VDIPAMQLVMNGGDSTYVALLPSG 739
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 127/188 (67%), Gaps = 16/188 (8%)
Query: 79 MDLEMDMELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPPDAAQPSGAAGGNAKKKRY 138
M + + E SGS HLD + +G D DA +PS + +KKRY
Sbjct: 59 MTRDTEAENDSRSGSDHLDAI------------SAAGEDDVEDA-EPSNS---RKRKKRY 102
Query: 139 HRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADN 198
HRHT QIQ++EALFKECPHPD+KQR +LS+ L L RQVKFWFQNRRTQMK Q +R +N
Sbjct: 103 HRHTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHEN 162
Query: 199 VILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDELDRLA 258
+L+ EN+ L+++N ++ A+R+ +C +CG A+L ++S EEQ LRIENARLKDEL+R+
Sbjct: 163 ALLKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVC 222
Query: 259 CIATRYGG 266
+AT++ G
Sbjct: 223 ALATKFLG 230
>Os04g0569100 Similar to OCL1 homeobox protein
Length = 806
Score = 301 bits (770), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 289/540 (53%), Gaps = 69/540 (12%)
Query: 343 DKQLVVDLAATAADQLARMCRAGEPLWV------RQRGAEVMAVEEHARMFSWPVDGAKQ 396
DK L ++LA +A D+L +M + G+PLW+ E + EE+ F P G K
Sbjct: 309 DKSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFP-PCIGVK- 366
Query: 397 GDGGAVARAEGTRDNAVVIMN-SINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASG 455
G V+ E +R++ +VI++ LV+ +D +W ++F ++ KA T + I+ G A
Sbjct: 367 -PEGYVS--EASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGS 423
Query: 456 HLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGF--EEGLLQA 513
+G LLLMQAE+Q LSPLV REV F R+ AD G WA+VD A+ ++G+ A
Sbjct: 424 R--NGALLLMQAELQVLSPLVPIREVKFLRFSKQLAD-GVWAVVDVSADELMRDQGITSA 480
Query: 514 SV---VRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATR 570
S + CRR PSGC++QD PNG+ +V WVEH E +E + P++R + SG A GA R
Sbjct: 481 SSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEY--DEASVHPLYRPLLRSGLALGAGR 538
Query: 571 WLSILQRQCERLA---SELARNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQS 627
W++ LQRQCE LA S +A D I PE + +M+KL++RM FCA +S S T+
Sbjct: 539 WIATLQRQCECLALLMSSIALPENDSSAIH-PEGKRSMLKLARRMTDNFCAGVSTSSTRE 597
Query: 628 WT---ALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRC 683
W+ L+ + + + V RK+ EPG P GV+L+A ++ W+P +++F L ++ R
Sbjct: 598 WSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRA 657
Query: 684 QLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVV 743
+ +ILSNGG + EV IA G N + LL+ + + QN L+LQE+ GS+VV
Sbjct: 658 EWDILSNGGPMQEVTSIAKGQQNGNTVCLLKASPTKD-KQNSMLILQETCADAS-GSMVV 715
Query: 744 FATVDVDAIQVTMSGEDPSYIPLLPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 803
+A VD+ A+ + MSG D S + LLP G
Sbjct: 716 YAPVDIPAMHLVMSGGDSSCVALLPSG--------------------------------- 742
Query: 804 XXXXXXXXXXXXXADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAINSHVCNAIHQI 863
AD + G LLTV Q+LA++ PSAKL + SV +++ + I +I
Sbjct: 743 --FAILPAGPSIGADHKM--GGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKI 798
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 104/133 (78%)
Query: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193
+KKRYHRHT QIQ++EA+FKECPHPD+KQR +LS+ LGL+PRQVKFWFQNRRTQMK Q
Sbjct: 104 RKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQL 163
Query: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 253
+R +N +L+ EN+ L+S+N ++ A N VC CG A+L ++S EE LR+ENARLKDE
Sbjct: 164 ERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKDE 223
Query: 254 LDRLACIATRYGG 266
L R+ +A ++ G
Sbjct: 224 LSRVCALAAKFLG 236
>Os08g0292000 Homeobox domain containing protein
Length = 786
Score = 226 bits (576), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 191/680 (28%), Positives = 305/680 (44%), Gaps = 82/680 (12%)
Query: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193
K +RY T Q + + F+ CP+PD KL++EL + Q+K+WFQN RT+MK +
Sbjct: 61 KPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKFK 120
Query: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 253
+ + +L+ ENE LK +N L+ ++N C C D + E +
Sbjct: 121 NNEERKLLQKENEELKKENAELRNRMKNSTCRACDLPLFHIDCRHWENPM---------- 170
Query: 254 LDRLACIATRYGGGGGRQPVLSTSALSCISAXXXXXXXXXXXXXNVYSRHFAEQAPVMGC 313
L++ G V S +S+ N+ S M
Sbjct: 171 LNK------------GNHGVTSNLIPQAVSSLLPSSSGFVASGSNLSSNAVLMPVSAMPS 218
Query: 314 GDLIPPPVVPQHDXXXXXXXXXXXPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQR 373
L P P V + +K +++DLA A ++ + + E L V+++
Sbjct: 219 SVLQPAPAVSGANFPILHNLSANANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKK 278
Query: 374 -------------GAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSIN 420
G E + +E+ + G K D V TRD A+V + ++
Sbjct: 279 ENGPLWLPHMDILGVESLNYQEY--LAKSRTIGQKPVDFKVVV----TRDTAIVNGSCVD 332
Query: 421 LVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAARE 480
LV + LDAN+W ELFP IV A T +II+ G ++ H G L LM+AE+Q +SP V +
Sbjct: 333 LVKSLLDANRWRELFPGIVASANTTKIISTGPSNLH--DGLLQLMRAELQVMSPEVPVCD 390
Query: 481 VVFFRYCVHNADEGSWAIVDFPAEGF---EEGLLQASV---------VRCRRRPSGCIIQ 528
V F R V G W +VD + E Q+SV + R PSGC+I+
Sbjct: 391 VTFLRQSVQFGS-GLWCVVDVSIDTILPGESKTAQSSVQTSSTAARRMEVRLLPSGCVIE 449
Query: 529 DMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELAR 588
+M NGYS+V W+ H +E+ + ++ + S A GA RW++ LQR + L+
Sbjct: 450 EMENGYSKVTWMVHAAY--DERAVPVLYHSLLRSAKALGACRWVASLQRHSQFLSGLHKY 507
Query: 589 NIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTE 648
+ R ++ L ++M ++F + AS +++ D T ++
Sbjct: 508 IFCPDSTMTEVVMRRKVLYLVKQMTSSFTG-LFASMSKATLQDGDDTHFAHQIV---GGA 563
Query: 649 PGQPSGVILTAVSTSWLPFTH-QQVFELLADEQ----QRCQL-EILS-----------NG 691
G+P+G++L+A +T WLP + + V++ L DEQ RC L E L NG
Sbjct: 564 TGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGAPLNG 623
Query: 692 GSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDA 751
++ E + NG H + ISL+ + N LLLQE+ T GSL+V+A DV+
Sbjct: 624 ETVPEFYRMVNGLHEGHAISLISPREMGGNISNT-LLLQEARTDLS-GSLIVYARTDVNT 681
Query: 752 IQVTM-SGEDPSYIPLLPLG 770
+ M SG +P+ + L+ G
Sbjct: 682 VHSIMNSGLNPATVFLVSSG 701
>Os08g0136100 Similar to Roc1
Length = 130
Score = 188 bits (477), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/130 (63%), Positives = 106/130 (81%)
Query: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193
+KKRYHRHT HQIQ++EA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q
Sbjct: 1 RKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 60
Query: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 253
+R +N LRAENE L+++N R + A+ N CPNCG A + +MS++E LR+ENARL+DE
Sbjct: 61 ERHENNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDE 120
Query: 254 LDRLACIATR 263
+DR++ IA +
Sbjct: 121 IDRISAIAAK 130
>Os06g0208100 Similar to Homeodomain protein HOX3
Length = 129
Score = 182 bits (461), Expect = 1e-45, Method: Composition-based stats.
Identities = 79/130 (60%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Query: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193
++KRYHRHT QIQQ+EA+FKECPHPD+ QR +LS+ELGL+PRQ+KFWFQNRRTQMKAQ
Sbjct: 1 RRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQH 60
Query: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDE 253
+RADN LRAEN+ ++ +N ++ A++NV+CP CG V D ++EQ+LR+ENARLK+E
Sbjct: 61 ERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPPVGEDY-FDEQKLRMENARLKEE 119
Query: 254 LDRLACIATR 263
LDR++ + ++
Sbjct: 120 LDRVSNLTSK 129
>Os09g0526300 Similar to Homeobox protein GLABRA2 (Homeobox-leucine zipper
protein ATHB-10) (HD-ZIP protein ATHB-10)
Length = 131
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 106/129 (82%), Gaps = 1/129 (0%)
Query: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193
KKKRYHRHT QIQ++EA+FKECPHPD+KQR++LS+ L L+ RQVKFWFQNRRTQMK Q
Sbjct: 1 KKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60
Query: 194 -DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKD 252
+R +N +LR EN+ L+++N ++ A+RN +C +CG AAVL ++S EEQ LRIENARLKD
Sbjct: 61 IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120
Query: 253 ELDRLACIA 261
ELDR+ +A
Sbjct: 121 ELDRVCALA 129
>Os01g0788800 Homeodomain-like containing protein
Length = 709
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 210/428 (49%), Gaps = 26/428 (6%)
Query: 341 EQDKQLVVDLAATAADQLARMCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGG 400
+ D+Q++ +LA A L + + LW G + + A ++P D + G
Sbjct: 213 QHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYEVLNKMAYDQAYPGDNSANAIG- 271
Query: 401 AVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSG 460
+ E TR ++V+M+ ++VD +D + FP ++ A T +I + G+ +G
Sbjct: 272 --FKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGY--NG 327
Query: 461 TLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRR 520
+ LM E+ F SPLV AR+ F RYC + +EG ++D ++G + + +CR+
Sbjct: 328 VIQLMTVEMMFPSPLVPARKCTFLRYC-NVLNEGLVVVIDV---SLDDGSIFS---KCRK 380
Query: 521 RPSGCIIQDMPNGYSRVVWVEHM--EMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQ 578
PSG +IQ + +V +EH+ + G + QP +G FGA RW++ + RQ
Sbjct: 381 MPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCM-----NGLVFGARRWVATMARQ 435
Query: 579 CERLASELARNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTA-LSDSTQD 637
R+ ++ N V + + R N+MKL+ ++ +F I+A+G +WT + T+
Sbjct: 436 SARM-RDVHHNKTAPQV--STKGRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEK 492
Query: 638 TIRVTTRKNTEPGQPSGVILTAVSTSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEV 697
IRV R+ TE IL+ ++ LP ++ F+LL + RC+ ++L +G + E
Sbjct: 493 DIRVAYRRTTEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEE 552
Query: 698 AHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMS 757
IA G + +++L A + ++LQ + + GS +V++ +D + + +
Sbjct: 553 VTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNG-YDASGSFMVYSQIDSELMNTMVL 611
Query: 758 GEDPSYIP 765
PS +P
Sbjct: 612 --SPSDLP 617
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 125 PSGAAGGNAKKKR-YHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQ 183
P ++ N K+KR R T Q + +E F C HPDD Q+ LS+ GL QVKFWFQ
Sbjct: 56 PVNSSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQ 115
Query: 184 NRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQL 243
N+RTQ+K + +N L ENE L+ +N R++ A VC C +++V ++ E ++L
Sbjct: 116 NKRTQVKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERL 175
Query: 244 RIENARLKDELDR 256
++ L+ E+ R
Sbjct: 176 MGQSEWLQQEIAR 188
>Os08g0187500 Similar to Roc1
Length = 326
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 85/115 (73%), Gaps = 9/115 (7%)
Query: 114 SGHDQPPDAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGL 173
SG DQ P+ +KKRYHRHT HQIQ+MEA FKECPHPDDKQR +LS+ELGL
Sbjct: 95 SGDDQDPNQ---------RPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGL 145
Query: 174 KPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCG 228
+P QVKFWFQN+RTQMK Q +R +N LRAEN+ L+++N R + A+ + CPNCG
Sbjct: 146 EPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALSSASCPNCG 200
>Os09g0526200 Similar to OCL3 protein
Length = 302
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 18/184 (9%)
Query: 603 TNMMKLSQRMITTFCANISASGTQSWTALSD--------------STQDTIRVTTRKNT- 647
+ M+KL+QRM FCA + AS Q W L + +D +R+ R +
Sbjct: 33 SRMLKLAQRMTDNFCAGVCASAAQKWRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVG 92
Query: 648 EPGQPSGVILTAVSTSWLPFT-HQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHP 706
PG+P GV+L+A ++ LP T Q+VF+ L DEQ+R +IL+NG ++ E+ HIA G H
Sbjct: 93 APGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHH 152
Query: 707 RNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPL 766
N +SLLR NA S +QN L+LQE+ T GSLVV+A VDV ++ V M+G D +Y+ L
Sbjct: 153 GNAVSLLRPNATSG-NQNNMLILQETCTD-SSGSLVVYAPVDVQSMHVVMNGGDSAYVSL 210
Query: 767 LPLG 770
LP G
Sbjct: 211 LPSG 214
>Os01g0384100
Length = 137
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Query: 311 MGCGDLIPPPVVPQH---DXXXXXXXXXXXPVQEQDKQLVVDLAATAADQLARMCRAGEP 367
MGCGDLIPPPVVP + P+QEQDKQLVV LA T ADQLARMC AGEP
Sbjct: 1 MGCGDLIPPPVVPLQIAANGSVAYMGAIMAPLQEQDKQLVVHLAPTEADQLARMCSAGEP 60
Query: 368 LWVRQRGAEVMAVEEHARMF 387
LWVRQRGAEVMAVEEHARMF
Sbjct: 61 LWVRQRGAEVMAVEEHARMF 80
>Os01g0760800 Similar to Homeodomain protein 1
Length = 134
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 86/128 (67%), Gaps = 11/128 (8%)
Query: 135 KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQD 194
+K YHRHTA QI+ MEALFKE PHPD++QR ++S++LGL RQVKFWFQNRRTQ+K +
Sbjct: 1 RKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIK---E 57
Query: 195 RADNVILRAENENLKSDNFRLQA-AIRNVVCPNCG-------HAAVLADMSYEEQQLRIE 246
R +N +L++E E L+ ++ ++ A + C NCG AA EQ+LR+E
Sbjct: 58 RHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRLE 117
Query: 247 NARLKDEL 254
A+LK E+
Sbjct: 118 KAKLKAEV 125
>Os07g0426600
Length = 196
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%)
Query: 117 DQPPDAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPR 176
D D S KR RHT QI+ +E++F+ C + QR++L+++LG++ R
Sbjct: 34 DAAVDYHDDSSEGQDEVSNKRMKRHTDDQIKHLESVFERCTYLGGNQRVQLAKKLGMEER 93
Query: 177 QVKFWFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADM 236
QVKFWFQNRRT+ K +R + + L+ EN+ L ++N L+ A+ +C CG V A
Sbjct: 94 QVKFWFQNRRTRKKMHDERQEGMWLQEENDVLHAENKVLKEAMWANICFTCGSPVVPAIP 153
Query: 237 SYEEQQLRIENARLKDEL 254
+ + + L +N RL DEL
Sbjct: 154 TVQHRYLSFQNMRLADEL 171
>Os07g0667200
Length = 164
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 478 AREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRV 537
A+EV F RYC ++G WAI D + +R RR PSGC+I +M N YS V
Sbjct: 41 AQEVNFVRYC-RQIEQGLWAITDIFVNLQRDAYFGVPPLRSRRLPSGCLIANMANSYSEV 99
Query: 538 VWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNI 590
VEHME V E+ P+ ++RD V SG FGA WL+ LQR C+R AS +A +
Sbjct: 100 TRVEHME-VEEKNPINVLYRDLVLSGDVFGAHCWLAALQRACDRYASLVALGV 151
>Os11g0145300
Length = 107
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Query: 338 PVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQRGAEVMAVEEHARMFSWPV 391
PVQEQDKQLVVDL +TA DQLARMC GEPL RQRGAE+MAVEEHARMF +
Sbjct: 3 PVQEQDKQLVVDLVSTAVDQLARMCSTGEPLH-RQRGAEMMAVEEHARMFRCEI 55
>Os12g0531514
Length = 97
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 42/56 (75%), Gaps = 5/56 (8%)
Query: 338 PVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQRG--AEVMAVEEHARMFSWPV 391
PVQEQDKQLVVDL +TAADQLARMC AGEPLW G A +M VEEHAR F +
Sbjct: 3 PVQEQDKQLVVDLTSTAADQLARMCSAGEPLWC---GCVARMMVVEEHARKFRCEI 55
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 28,580,132
Number of extensions: 1171747
Number of successful extensions: 3887
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 3841
Number of HSP's successfully gapped: 23
Length of query: 882
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 772
Effective length of database: 11,292,261
Effective search space: 8717625492
Effective search space used: 8717625492
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 161 (66.6 bits)