BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0547000 Os09g0547000|AK062728
(141 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0547000 Similar to Auxin induced protein 294 1e-80
Os09g0545900 209 5e-55
Os09g0546700 179 6e-46
Os09g0545700 Similar to Auxin induced protein 176 6e-45
Os09g0545500 173 4e-44
Os09g0546100 Auxin responsive SAUR protein family protein 167 2e-42
Os09g0546800 Similar to Auxin induced protein 166 4e-42
Os09g0546000 Similar to Auxin induced protein 161 2e-40
Os09g0547100 Similar to Auxin induced protein 161 2e-40
Os09g0546500 Similar to Auxin induced protein 161 2e-40
Os08g0550700 Similar to Auxin induced protein 161 2e-40
Os09g0546900 Similar to Auxin induced protein 155 8e-39
Os09g0545280 Similar to Auxin induced protein 153 3e-38
Os09g0546300 Similar to Auxin induced protein 142 5e-35
Os09g0546233 141 1e-34
Os03g0290100 124 3e-29
Os03g0368100 120 4e-28
Os09g0546266 109 7e-25
Os07g0475700 Auxin responsive SAUR protein family protein 69 1e-12
>Os09g0547000 Similar to Auxin induced protein
Length = 141
Score = 294 bits (752), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM
Sbjct: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVR 120
YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVR
Sbjct: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVR 120
Query: 121 PCLNTSVVPPMRLNQQFAVCS 141
PCLNTSVVPPMRLNQQFAVCS
Sbjct: 121 PCLNTSVVPPMRLNQQFAVCS 141
>Os09g0545900
Length = 285
Score = 209 bits (532), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/110 (88%), Positives = 103/110 (93%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MISSRKLAQL KKWQ MVASSGRQTA+IDGCCSTAT YVADKGHCVLYTTDGARFEVPLM
Sbjct: 176 MISSRKLAQLAKKWQMMVASSGRQTANIDGCCSTATVYVADKGHCVLYTTDGARFEVPLM 235
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEI 110
YLNT +FCELLR+SQEEFGF S+ KITLP DA+VMEYVMCLIRRDASEE+
Sbjct: 236 YLNTVVFCELLRMSQEEFGFTSDYKITLPYDAAVMEYVMCLIRRDASEEV 285
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 75/103 (72%), Gaps = 8/103 (7%)
Query: 1 MISSRKLAQLGKKWQ-RMV---ASSGRQTASI-DGCCSTATAYVADKGHCVLYTTDGARF 55
MI ++KLAQL +K Q +MV A SGR TA CCSTA+ +A KGHC +YT DGARF
Sbjct: 1 MIHAKKLAQLARKLQQKMVSASAGSGRHTAGTSHDCCSTAS--LAGKGHCAVYTADGARF 58
Query: 56 EVPLMYLNTAIFCELLRVSQEEFGFAS-NNKITLPCDASVMEY 97
EVPL YL TA+F ELL +S EEFGFAS + +ITL CD SVME+
Sbjct: 59 EVPLPYLGTAVFGELLTMSHEEFGFASEDGRITLTCDTSVMEW 101
>Os09g0546700
Length = 144
Score = 179 bits (454), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 111/144 (77%), Gaps = 3/144 (2%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MI S+KLAQL +K QR+ ++ + GC ST+ + VADKGHC +YT+DGARFEVPL
Sbjct: 1 MIHSKKLAQLARKLQRIKTAASNREDDDAGCTSTSPSPVADKGHCAVYTSDGARFEVPLP 60
Query: 61 YLNTAIFCELLRVSQEEFGFA-SNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIV 119
YL T +F ELLR+SQEEFGFA + +ITLPCDA+ MEYVMCL+RR+ASEE+E+A LSS+V
Sbjct: 61 YLGTTVFVELLRMSQEEFGFAGGDGRITLPCDAAAMEYVMCLLRRNASEEVERAFLSSVV 120
Query: 120 R-PCLNTS-VVPPMRLNQQFAVCS 141
PC N+ +PP+ L+ QFAVCS
Sbjct: 121 TMPCQNSGCTMPPVALHHQFAVCS 144
>Os09g0545700 Similar to Auxin induced protein
Length = 141
Score = 176 bits (445), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 111/146 (76%), Gaps = 10/146 (6%)
Query: 1 MISSRKLAQLGKKWQRMVASSG--RQTASI--DGCCSTATAYVADKGHCVLYTTDGARFE 56
MIS++KLAQL KK Q +AS+G RQ A + D CCSTA+ +A KGHC +YT DGARFE
Sbjct: 1 MISAKKLAQLAKKLQMRMASAGGSRQKAVVAADDCCSTASLSLAGKGHCAVYTADGARFE 60
Query: 57 VPLMYLNTAIFCELLRVSQEEFGFASNN-KITLPCDASVMEYVMCLIRRDASEEIEKALL 115
VPL YL T +F ELL +S+EEFGFA ++ +ITLPCDASVMEYVMCL+ RDASEE+E+A L
Sbjct: 61 VPLPYLGTPLFGELLTMSREEFGFAGDDGRITLPCDASVMEYVMCLLSRDASEEVERAFL 120
Query: 116 SSIVRPCLNTSVVPPMRLNQQFAVCS 141
SS+ RPC N V+ + QFAVC+
Sbjct: 121 SSMARPCRNIGVI-----SHQFAVCT 141
>Os09g0545500
Length = 138
Score = 173 bits (439), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 111/142 (78%), Gaps = 6/142 (4%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MI S++LAQL ++ QR+ ++ R+ D CC+T+ VADKG C +YT DG RF+VPL
Sbjct: 1 MIHSKRLAQLARRLQRVKTTAARED---DACCTTSP--VADKGRCTMYTADGRRFKVPLP 55
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVR 120
YL T +F ELLR+SQEEFGFA + +ITLPCDA+VMEYVMCL+RR+ASE++E+A LSS+V
Sbjct: 56 YLGTTVFGELLRMSQEEFGFAGDGRITLPCDAAVMEYVMCLLRRNASEDVERAFLSSVVM 115
Query: 121 PCLNTSV-VPPMRLNQQFAVCS 141
C ++S VPP+ L+QQF+VCS
Sbjct: 116 SCQDSSCGVPPVALHQQFSVCS 137
>Os09g0546100 Auxin responsive SAUR protein family protein
Length = 141
Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 105/143 (73%), Gaps = 9/143 (6%)
Query: 1 MISSRKLAQLGKKWQRMVASSGR----QTASIDGCCSTATAYVADKGHCVLYTTDGARFE 56
MIS+R+LAQL KKWQRM A + + + CC++ VA KGHCV+YT DG+RFE
Sbjct: 1 MISARRLAQLAKKWQRMAALERKRLTMKAKENEECCTS----VAGKGHCVMYTADGSRFE 56
Query: 57 VPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLS 116
VPL YL TA+F ELLR+SQEEFGF S+ +I LPCDA VMEY MCL++R+AS E+EKALLS
Sbjct: 57 VPLAYLGTAVFSELLRMSQEEFGFTSDGRIMLPCDAVVMEYAMCLLKRNASAEVEKALLS 116
Query: 117 SIVRPCLNTS-VVPPMRLNQQFA 138
S+V PC T +VP + +NQ +
Sbjct: 117 SMVAPCHYTGCMVPTVGVNQHIS 139
>Os09g0546800 Similar to Auxin induced protein
Length = 141
Score = 166 bits (421), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 109/144 (75%), Gaps = 11/144 (7%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDG-----CCSTATAYVADKGHCVLYTTDGARF 55
MIS+R++AQL KKWQRM A+ GR+ ++ CCS+ +A KGHC +YT DG+RF
Sbjct: 1 MISARRVAQLAKKWQRM-AALGRKRLTVRAKQDQECCSS----MAGKGHCAMYTADGSRF 55
Query: 56 EVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALL 115
EVPL YL TA+F ELLR+SQEEFGF+ + +I LPCDA+VMEY MCL+RR+AS E+EKALL
Sbjct: 56 EVPLAYLGTAVFSELLRMSQEEFGFSIDGRIMLPCDAAVMEYAMCLLRRNASVEVEKALL 115
Query: 116 SSIVRPCLNT-SVVPPMRLNQQFA 138
SS+V C T S+VP + +NQQ +
Sbjct: 116 SSMVASCHYTGSMVPTVGVNQQIS 139
>Os09g0546000 Similar to Auxin induced protein
Length = 144
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 104/148 (70%), Gaps = 12/148 (8%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQ------TASIDGCCSTATAYVADKGHCVLYTTDGAR 54
MIS+++LAQ+ KKWQRM A+ GR+ + D CCS+ VA KGHC++YT DG R
Sbjct: 1 MISAKRLAQMVKKWQRM-AAFGRKRLTWTAPKATDKCCSS----VAVKGHCIMYTADGRR 55
Query: 55 FEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKAL 114
FEVPL +L T IF ELLR+SQEEFGF S+ ITLPCDA VMEYVMCL++R+ASEE+ +A
Sbjct: 56 FEVPLAFLATTIFAELLRISQEEFGFTSDGGITLPCDAEVMEYVMCLLKRNASEEVVRAF 115
Query: 115 LSSIVRPC-LNTSVVPPMRLNQQFAVCS 141
LS+IV+PC + + QQ A S
Sbjct: 116 LSTIVKPCHYGSGFAQSLGFVQQVAASS 143
>Os09g0547100 Similar to Auxin induced protein
Length = 150
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 104/151 (68%), Gaps = 14/151 (9%)
Query: 1 MISSRKLAQLGKKWQRMVA---------SSGRQTASIDGCCSTATAYVADKGHCVLYTTD 51
MIS++++AQL KKW+RM A S+ T GC STA VA KGHC +YT D
Sbjct: 3 MISAKRIAQLAKKWRRMAALGRKRLTMSSTAMATEEAQGC-STA---VAGKGHCAIYTAD 58
Query: 52 GARFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIE 111
GARFEVPL YL TA+ ELL +S+EE+GF+ + KITLPCDA VMEYV+CL+ R+AS E+E
Sbjct: 59 GARFEVPLAYLGTAVLGELLTMSREEYGFSGDGKITLPCDAMVMEYVLCLLGRNASAEVE 118
Query: 112 KALLSSIVRPCLNTS-VVPPMRLNQQFAVCS 141
KA LSS+V PC S V P + QQ AVCS
Sbjct: 119 KAFLSSMVMPCHYASCVTPSLGACQQVAVCS 149
>Os09g0546500 Similar to Auxin induced protein
Length = 144
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 106/148 (71%), Gaps = 12/148 (8%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASI------DGCCSTATAYVADKGHCVLYTTDGAR 54
MIS++++AQL KKW+RM A+ GR+ ++ +GC + VA KG+C++YT DG R
Sbjct: 1 MISTKRIAQLAKKWRRM-AAKGRKRLTMMAPQEAEGC----STMVAGKGYCIVYTADGMR 55
Query: 55 FEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKAL 114
FEVPL YL T +F ELLR+SQEEFGF S+ KITLPCDA VMEYVMCL+RR+AS ++EKA
Sbjct: 56 FEVPLRYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAF 115
Query: 115 LSSIVRPC-LNTSVVPPMRLNQQFAVCS 141
LSS+ C S P + +N Q A+CS
Sbjct: 116 LSSMAISCHYANSTTPSLGVNMQVAICS 143
>Os08g0550700 Similar to Auxin induced protein
Length = 143
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 107/146 (73%), Gaps = 9/146 (6%)
Query: 1 MISSRKLAQLGKKWQRMVA-SSGRQTASIDGCCS--TATAYVADKGHCVLYTTDGARFEV 57
MISS+KL QL KKWQ M A R TAS + ++ VA KG+CV+Y+ DG RFE+
Sbjct: 1 MISSKKLVQLSKKWQGMGAIGRKRVTASEKEIIHHSSCSSSVAGKGNCVVYSCDGRRFEI 60
Query: 58 PLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSS 117
PL YL T +F ELLR+SQEEFGF+S+ +ITLPCDA+VMEYVMCL+ R+ASEE+EKALLSS
Sbjct: 61 PLAYLRTPVFVELLRMSQEEFGFSSDGRITLPCDAAVMEYVMCLLGREASEEVEKALLSS 120
Query: 118 IVRPCLNTSVVPPMRL--NQQFAVCS 141
IV PC + P R+ +Q FAVCS
Sbjct: 121 IVMPCSHH----PSRMAQHQHFAVCS 142
>Os09g0546900 Similar to Auxin induced protein
Length = 144
Score = 155 bits (392), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 97/128 (75%), Gaps = 11/128 (8%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQT------ASIDGCCSTATAYVADKGHCVLYTTDGAR 54
MIS+++LAQ+ KKWQR +A+ GR+ + D CCS+ VA KGHC++YT DG R
Sbjct: 1 MISAKRLAQMAKKWQR-IAALGRKRITWTTPKATDECCSS----VAVKGHCIMYTADGRR 55
Query: 55 FEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKAL 114
FEVPL +L T IF ELLR+SQEEFGF ++ ITLPCDA VMEYV+CL+RR+ASEE+ +A
Sbjct: 56 FEVPLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAF 115
Query: 115 LSSIVRPC 122
LS+IV+ C
Sbjct: 116 LSTIVKSC 123
>Os09g0545280 Similar to Auxin induced protein
Length = 171
Score = 153 bits (387), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 106/149 (71%), Gaps = 15/149 (10%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGC-------CSTATAYVADKGHCVLYTTDGA 53
MI+ ++L L KKWQ M A+ GR+ +I G CS+A +ADKGHC++YT DG
Sbjct: 27 MINPKRLVHLAKKWQHM-AALGRRRLTITGATKEGNLRCSSA---IADKGHCIIYTADGE 82
Query: 54 RFEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKA 113
RF VPL YL+T +F ELLR+S++EFGF KITLPC+A+VMEYVMCL+RR SEE+E+A
Sbjct: 83 RFGVPLTYLSTTVFGELLRLSEDEFGFTGEEKITLPCEAAVMEYVMCLLRRKPSEEVEQA 142
Query: 114 LLSSIVRPC---LNTSVVPPMRLNQQFAV 139
++SS+V PC +TS+V + L+Q A+
Sbjct: 143 VVSSVVMPCNYKSSTSMV-SVNLSQSLAI 170
>Os09g0546300 Similar to Auxin induced protein
Length = 157
Score = 142 bits (359), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 89/126 (70%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
MIS+++L QL KKWQRM A ++ + + VA KGHCV+YT DG RFEVPL+
Sbjct: 1 MISAKRLVQLAKKWQRMAALGRKRVMAAAQETEECSTSVAVKGHCVMYTADGRRFEVPLV 60
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVR 120
YL +F ELLR+SQEEFGF S+ +I LPCDA+ MEY MCL++R+AS ++ ALLSS++
Sbjct: 61 YLGMRVFIELLRMSQEEFGFTSDGRIMLPCDAAEMEYAMCLLKRNASADVVNALLSSMLT 120
Query: 121 PCLNTS 126
C T+
Sbjct: 121 SCRYTA 126
>Os09g0546233
Length = 140
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 101/143 (70%), Gaps = 10/143 (6%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQ----TASIDGCCSTATAYVADKGHCVLYTTDGARFE 56
MIS+++L QL K WQRM A+ GR+ A CST+ VA KGHCV+YT DG RFE
Sbjct: 1 MISAKRLVQLAK-WQRM-AALGRKRIMGKAQETEECSTS---VAVKGHCVMYTADGRRFE 55
Query: 57 VPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLS 116
VPL YL T +F ELLR+SQEEFGF S+ +I LPCDA+ MEY MCL++R+ S E+ ALLS
Sbjct: 56 VPLAYLGTVVFSELLRMSQEEFGFTSDGRIVLPCDAAEMEYAMCLLKRNPSVEVVDALLS 115
Query: 117 SIVRPCLNT-SVVPPMRLNQQFA 138
S++ C T S+VP + +NQQ +
Sbjct: 116 SMLIRCHCTGSMVPTVGVNQQIS 138
>Os03g0290100
Length = 207
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Query: 25 TASIDG-CCSTATAYVADKGHCVLYTTDGARFEVPLMYLNTAIFCELLRVSQEEFGFASN 83
TA G CCSTA++ +A KGH +YT DGARFEVPL+YL +F ELL +SQEEFGFAS+
Sbjct: 17 TAGTTGDCCSTASSSLAGKGHSAVYTADGARFEVPLVYLGMMVFGELLAMSQEEFGFASD 76
Query: 84 N-KITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVRPC 122
+ +ITL CDA VMEYVMCLI DASEE+E+ LS + C
Sbjct: 77 DGRITLTCDALVMEYVMCLISIDASEEVERVFLSFMASSC 116
>Os03g0368100
Length = 215
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 25 TASIDG-CCSTATAYVADKGHCVLYTTDGARFEVPLMYLNTAIFCELLRVSQEEFGFASN 83
TA G CCSTA++ +A KGH YT DGARFEVPL+YL T + ELL +SQEEFGFA +
Sbjct: 17 TAGTTGDCCSTASSSLAGKGHSAEYTADGARFEVPLVYLGTMVLGELLVMSQEEFGFAGD 76
Query: 84 N-KITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVRPC 122
+ +I L CDASVME VMCLI RDASEE+E+ LS + C
Sbjct: 77 DGRIMLTCDASVMEQVMCLISRDASEEVERMFLSCMASSC 116
>Os09g0546266
Length = 110
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 8/96 (8%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQ----TASIDGCCSTATAYVADKGHCVLYTTDGARFE 56
MIS+++L QL KKWQR +A+ GR+ A CST+ VA KGHCV+YT DG RFE
Sbjct: 1 MISAKRLVQLAKKWQR-IAALGRKRIMAKAQETEECSTS---VAVKGHCVMYTADGRRFE 56
Query: 57 VPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDA 92
VPL YL TA+F ELLR+SQEEFGF S+ +I LP DA
Sbjct: 57 VPLTYLGTAVFSELLRMSQEEFGFTSDGRIVLPFDA 92
>Os07g0475700 Auxin responsive SAUR protein family protein
Length = 120
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 1 MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM 60
M+SS +LA++ +KW SG ++ + TA A +GH YT DG+RF VP+
Sbjct: 1 MVSSLRLAEISRKW------SGSGSSKVTS--PTAAAAACPRGHFAAYTRDGSRFFVPIA 52
Query: 61 YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIR 103
L + F ELL ++EEFG I LPC A + ++ R
Sbjct: 53 CLASDTFRELLSTAEEEFGSPGGRPIVLPCSADRLHQILAAFR 95
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,297,687
Number of extensions: 142412
Number of successful extensions: 494
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 473
Number of HSP's successfully gapped: 20
Length of query: 141
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 50
Effective length of database: 12,284,327
Effective search space: 614216350
Effective search space used: 614216350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 151 (62.8 bits)