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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0547100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin induced protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.02 (0.0113) R2 : 0.0429
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.108 (0.0239) R2dN8 : 0.0554 R2N8 : 0.0429
σ : 0.213
deviance : 20.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.74 0.209 3.04 0.0824 0.107 -0.169 0.113 -0.516 0.047 9.42 83.45 5187 -- --
19.98 0.208 3.04 0.0174 0.0868 -0.197 0.051 -- 0.0314 8.5 83.62 4332 -- --
19.74 0.207 3.04 0.0935 0.0863 -0.13 -- -0.543 0.0685 9.26 83 5913 -- --
19.97 0.208 3.04 0.019 0.083 -0.204 -- -- 0.0212 8.89 83.67 4322 -- --
20.15 0.209 3.04 0.0899 -- -0.132 -- -0.518 0.0642 -- 83.02 5853 -- --
20.5 0.212 3.02 -0.00136 0.0839 -- 0.0478 -- 0.108 9.29 -- -- -- --
20.51 0.212 3.02 0.000258 0.084 -- -- -- 0.108 9.17 -- -- -- --
20.36 0.21 3.04 0.0193 -- -0.206 -- -- 0.0204 -- 83.66 4334 -- --
19.98 0.208 3.04 -- 0.0829 -0.2 -- -- 0.0209 8.88 83.76 4322 -- --
20.92 0.214 3.02 -5.31e-06 -- -- -- -- 0.108 -- -- -- -- --
20.51 0.212 3.02 -- 0.084 -- -- -- 0.107 9.17 -- -- -- --
20.37 0.21 3.04 -- -- -0.203 -- -- 0.0199 -- 83.84 4335 -- --
20.92 0.213 3.02 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.30 radiation 10.0 90 < th dose dependent rect. 6 6
6 19.43 radiation 10.0 90 < th dose independent rect. 6 6
17 19.49 humidity 90.0 90 < th dose dependent rect. 2 5
27 19.55 atmosphere 1000.0 10 > th dose independent rect. 21 23
34 19.59 atmosphere 1000.0 30 > th dose independent rect. 8 22
35 19.60 humidity 90.0 10 < th dose independent rect. 3 1
39 19.60 humidity 90.0 30 < th dose dependent rect. 3 1
59 19.63 temperature 25.0 90 < th dose independent rect. 6 1
60 19.63 wind 9.0 4320 < th dose independent rect. 7 2
62 19.63 temperature 25.0 90 < th dose independent rect. 6 3
71 19.65 wind 5.0 10 > th dose independent rect. 7 3
74 19.65 radiation 10.0 10 < th dose independent rect. 7 4
80 19.66 wind 1.0 30 > th dose dependent rect. 6 2
86 19.67 temperature 10.0 10 > th dose dependent rect. 23 7
89 19.68 humidity 80.0 14400 < th dose dependent rect. 3 6
91 19.69 humidity 90.0 10 < th dose dependent rect. 20 1
94 19.69 radiation 1.0 43200 < th dose dependent rect. 21 1
106 19.70 temperature 20.0 30 > th dose independent rect. 6 15
107 19.70 temperature 20.0 10 > th dose independent rect. 6 17
110 19.70 temperature 30.0 90 < th dose dependent rect. 6 1
111 19.70 atmosphere 1010.0 30 < th dose dependent rect. 20 1
113 19.70 temperature 30.0 10 < th dose dependent rect. 6 2
130 19.71 atmosphere 995.0 270 > th dose independent rect. 7 10
131 19.71 radiation 10.0 270 < th dose independent rect. 17 16
134 19.71 temperature 25.0 30 > th dose dependent rect. 20 3
138 19.72 wind 5.0 10 < th dose independent rect. 20 1
139 19.72 humidity 90.0 10 < th dose independent rect. 20 1
140 19.72 wind 1.0 30 > th dose independent rect. 6 2
141 19.72 humidity 70.0 14400 > th dose independent rect. 8 2
145 19.72 humidity 90.0 90 < th dose independent rect. 2 6
147 19.72 temperature 15.0 10 > th dose independent rect. 21 23
149 19.72 temperature 25.0 10 > th dose dependent rect. 20 1
158 19.72 humidity 80.0 14400 < th dose dependent rect. 7 2
164 19.72 humidity 80.0 4320 > th dose dependent rect. 5 8
166 19.72 humidity 70.0 4320 > th dose dependent rect. 2 11
167 19.72 humidity 80.0 14400 < th dose dependent rect. 23 11
171 19.73 wind 1.0 10 > th dose independent rect. 20 1
176 19.73 temperature 10.0 10 > th dose independent rect. 20 1
180 19.73 temperature 30.0 10 < th dose independent rect. 20 1
181 19.73 humidity 50.0 10 > th dose independent rect. 20 1
185 19.73 atmosphere 995.0 10 > th dose independent rect. 20 1
186 19.73 atmosphere 1010.0 10 < th dose independent rect. 20 1
188 19.73 radiation 1.0 10 < th dose independent rect. 20 1
193 19.73 precipitation 0.1 10 < th dose independent rect. 20 1
197 19.73 humidity 70.0 14400 > th dose independent rect. 4 6
204 19.73 wind 1.0 10 > th dose dependent rect. 20 1
206 19.73 temperature 10.0 10 > th dose dependent rect. 20 1
209 19.73 humidity 80.0 4320 > th dose dependent rect. 8 1
210 19.73 radiation 1.0 10 < th dose dependent rect. 20 1
219 19.73 precipitation 0.1 10 < th dose dependent rect. 20 1
220 19.73 humidity 80.0 4320 > th dose dependent rect. 5 5
237 19.73 humidity 60.0 4320 > th dose dependent rect. 23 14
238 19.73 radiation 20.0 270 < th dose dependent rect. 17 15
247 19.74 temperature 10.0 1440 > th dose independent rect. 21 1
252 19.74 temperature 30.0 1440 < th dose independent rect. 21 1
259 19.74 humidity 50.0 1440 > th dose independent rect. 21 1
265 19.74 humidity 90.0 4320 < th dose independent rect. 8 1
266 19.74 atmosphere 1005.0 10 > th dose independent rect. 20 1
270 19.74 atmosphere 995.0 1440 > th dose independent rect. 21 1
278 19.74 radiation 1.0 1440 < th dose independent rect. 21 1
299 19.74 humidity 70.0 14400 < th dose independent rect. 8 2
300 19.74 radiation 1.0 10 > th dose independent rect. 6 2
312 19.74 temperature 10.0 1440 > th dose independent rect. 22 23
315 19.74 wind 7.0 10 < th dose dependent rect. 20 1
324 19.74 temperature 30.0 30 < th dose dependent rect. 20 1
325 19.74 humidity 50.0 30 > th dose dependent rect. 20 1
327 19.74 atmosphere 1005.0 30 > th dose dependent rect. 3 1
328 19.74 atmosphere 995.0 10 > th dose dependent rect. 20 1
345 19.74 humidity 80.0 4320 > th dose dependent rect. 6 3
373 19.75 radiation 1.0 30 > th dose independent rect. 8 22
375 19.75 humidity 70.0 4320 > th dose dependent sin 4 NA
408 19.76 atmosphere 1000.0 720 > th dose independent rect. 8 1
409 19.76 wind 9.0 30 < th dose independent rect. 6 2
411 19.76 temperature 10.0 30 > th dose independent rect. 6 2
413 19.76 temperature 10.0 1440 > th dose independent rect. 7 2
419 19.76 humidity 50.0 30 > th dose independent rect. 6 2
421 19.76 humidity 50.0 1440 > th dose independent rect. 7 2
423 19.76 atmosphere 995.0 30 > th dose independent rect. 6 2
425 19.76 atmosphere 1015.0 30 < th dose independent rect. 6 2
426 19.76 atmosphere 1015.0 1440 < th dose independent rect. 7 2
428 19.76 precipitation 0.1 30 < th dose independent rect. 6 2
443 19.76 temperature 10.0 30 > th dose independent rect. 8 22
444 19.76 temperature 10.0 1440 > th dose independent rect. 9 22
456 19.76 precipitation 0.1 30 < th dose dependent rect. 6 2
500 19.77 radiation 10.0 90 < th dose independent rect. 6 17
501 19.77 atmosphere 1000.0 10 > th dose independent rect. 10 20
544 19.78 humidity 90.0 4320 > th dose independent rect. 8 1
571 19.78 humidity 90.0 4320 < th dose independent rect. 4 7
589 19.78 humidity 80.0 4320 > th dose independent rect. 21 16
594 19.78 precipitation 0.1 10 < th dose independent rect. 21 23
601 19.78 humidity 60.0 14400 < th dose dependent rect. 12 1
602 19.78 radiation 10.0 10 > th dose dependent rect. 6 1
667 19.78 precipitation 0.1 10 < th dose dependent rect. 21 23
670 19.79 atmosphere 1010.0 270 < th dose independent rect. 6 1
672 19.79 atmosphere 1005.0 30 > th dose independent rect. 6 2
673 19.79 radiation 40.0 30 < th dose independent rect. 6 2
675 19.79 humidity 70.0 4320 < th dose independent rect. 14 3
676 19.79 humidity 80.0 4320 > th dose independent rect. 7 6
678 19.79 humidity 80.0 4320 < th dose independent rect. 7 6
680 19.79 atmosphere 1005.0 30 > th dose independent rect. 23 7
681 19.79 atmosphere 995.0 10 > th dose independent rect. 10 10
684 19.79 precipitation 0.1 10 < th dose independent rect. 8 22
689 19.79 atmosphere 1005.0 30 > th dose dependent rect. 6 1
692 19.79 atmosphere 995.0 30 > th dose dependent rect. 6 2
695 19.79 temperature 30.0 10 < th dose dependent rect. 6 4
724 19.79 precipitation 0.1 10 < th dose dependent rect. 8 22
735 19.80 humidity 90.0 4320 < th dose independent rect. 5 4
751 19.80 humidity 50.0 270 > th dose independent rect. 17 14
755 19.80 radiation 10.0 90 < th dose independent rect. 6 15
757 19.80 humidity 80.0 4320 < th dose independent rect. 21 16
759 19.80 humidity 50.0 30 > th dose independent rect. 21 23
767 19.80 atmosphere 995.0 720 > th dose dependent rect. 8 1
808 19.80 humidity 90.0 4320 < th dose dependent rect. 22 18
820 19.81 humidity 70.0 4320 < th dose independent rect. 16 1
829 19.81 temperature 15.0 10 > th dose independent rect. 23 7
849 19.81 wind 1.0 90 > th dose independent rect. 19 13
853 19.81 precipitation 0.1 270 < th dose independent rect. 17 14
859 19.81 wind 9.0 30 < th dose independent rect. 21 23
861 19.81 humidity 80.0 14400 < th dose dependent sin 8 NA
876 19.81 temperature 10.0 30 > th dose dependent rect. 21 9
899 19.81 precipitation 0.1 270 < th dose dependent rect. 17 14
916 19.81 radiation 10.0 90 < th dose dependent rect. 6 17
929 19.82 humidity 70.0 4320 > th dose independent rect. 16 1
930 19.82 humidity 60.0 14400 < th dose independent rect. 11 1
945 19.82 humidity 80.0 30 > th dose independent rect. 6 4
960 19.82 radiation 10.0 270 < th dose independent rect. 3 7
983 19.82 wind 9.0 270 < th dose independent rect. 17 14
988 19.82 wind 9.0 10 < th dose independent rect. 6 17
994 19.82 wind 9.0 30 < th dose independent rect. 8 22
995 19.82 humidity 50.0 30 > th dose independent rect. 8 22