Os08g0550700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin induced protein.
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Os08g0550700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.11 | 0.679 | 4.62 | 0.484 | 0.643 | 1.65 | -0.246 | 2.31 | -0.374 | 7.52 | 24.88 | 748 | -- | -- |
| 214.84 | 0.683 | 4.56 | 0.904 | 0.646 | 1.5 | 0.336 | -- | -0.258 | 7.15 | 26.09 | 826 | -- | -- |
| 209.18 | 0.674 | 4.62 | 0.494 | 0.652 | 1.65 | -- | 2.23 | -0.37 | 7.33 | 24.94 | 765 | -- | -- |
| 215.16 | 0.683 | 4.56 | 0.894 | 0.643 | 1.46 | -- | -- | -0.268 | 7.19 | 26.1 | 825 | -- | -- |
| 222.35 | 0.694 | 4.61 | 0.59 | -- | 1.86 | -- | 1.85 | -0.311 | -- | 30.25 | 585 | -- | -- |
| 246.56 | 0.736 | 4.63 | 0.472 | 0.822 | -- | 0.0773 | -- | -0.591 | 8.07 | -- | -- | -- | -- |
| 246.58 | 0.735 | 4.63 | 0.474 | 0.821 | -- | -- | -- | -0.591 | 8.09 | -- | -- | -- | -- |
| 225.48 | 0.699 | 4.57 | 0.948 | -- | 1.89 | -- | -- | -0.257 | -- | 31.3 | 586 | -- | -- |
| 233.44 | 0.712 | 4.6 | -- | 0.685 | 1.03 | -- | -- | -0.446 | 7.54 | 25.8 | 763 | -- | -- |
| 283.6 | 0.787 | 4.65 | 0.481 | -- | -- | -- | -- | -0.581 | -- | -- | -- | -- | -- |
| 252.5 | 0.743 | 4.64 | -- | 0.824 | -- | -- | -- | -0.644 | 8.05 | -- | -- | -- | -- |
| 247.03 | 0.732 | 4.61 | -- | -- | 1.56 | -- | -- | -0.415 | -- | 31.7 | 566 | -- | -- |
| 289.71 | 0.794 | 4.66 | -- | -- | -- | -- | -- | -0.634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.10 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 3 | 202.65 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 8 | 203.60 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 12 | 204.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 23 | 204.66 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 51 | 205.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 64 | 206.43 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 71 | 206.63 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 73 | 206.68 | temperature | 20.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 82 | 206.78 | temperature | 30.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 83 | 206.81 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 100 | 207.07 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 19 |
| 141 | 207.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 153 | 207.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 157 | 207.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 184 | 207.95 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 214 | 208.19 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 255 | 208.55 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 266 | 208.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 281 | 208.69 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 286 | 208.71 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 290 | 208.74 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 293 | 208.75 | temperature | 25.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 310 | 208.87 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 380 | 209.19 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 469 | 209.60 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 597 | 210.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 602 | 210.23 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 20 |
| 657 | 210.50 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 723 | 210.74 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 746 | 210.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 747 | 210.84 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 772 | 210.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 775 | 210.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 790 | 211.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 791 | 211.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 866 | 211.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 971 | 211.56 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 1 |