Os09g0546300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin induced protein.
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Os09g0546300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 367.56 | 0.901 | 3.18 | -0.31 | 0.11 | 39.2 | -1.04 | -133 | -0.142 | 11 | 0.09377 | 10 | 3.14 | 14.7 |
| 410.14 | 0.95 | 3.11 | -0.0628 | 0.228 | 0.967 | -1.04 | -- | -0.188 | 8.49 | 0.09377 | 10 | 3.14 | 14.7 |
| 370.92 | 0.897 | 3.19 | -0.358 | 0.196 | 38.5 | -- | -131 | -0.151 | 7.52 | 0.1746 | 9 | 3.02 | 15.4 |
| 378.59 | 0.906 | 3.09 | -0.0783 | 0.266 | 4.13 | -- | -- | -0.161 | 6.73 | 0.4035 | 3 | 5.97 | 14 |
| 372.97 | 0.899 | 3.19 | -0.357 | -- | 38.7 | -- | -131 | -0.148 | -- | 0.1639 | 9 | 3.07 | 15 |
| 411.07 | 0.95 | 3.11 | -0.0536 | 0.231 | -- | -1.03 | -- | -0.19 | 8.49 | -- | -- | -- | -- |
| 413.51 | 0.952 | 3.11 | -0.0912 | 0.275 | -- | -- | -- | -0.193 | 6.67 | -- | -- | -- | -- |
| 382.57 | 0.911 | 3.1 | -0.121 | -- | 4.19 | -- | -- | -0.163 | -- | 0.4004 | 3 | 5.92 | 15 |
| 378.85 | 0.907 | 3.1 | -- | 0.28 | 4.19 | -- | -- | -0.16 | 6.96 | 0.4019 | 3 | 5.85 | 14.1 |
| 417.47 | 0.955 | 3.11 | -0.0847 | -- | -- | -- | -- | -0.187 | -- | -- | -- | -- | -- |
| 413.73 | 0.951 | 3.11 | -- | 0.274 | -- | -- | -- | -0.183 | 6.69 | -- | -- | -- | -- |
| 382.84 | 0.911 | 3.11 | -- | -- | 4.18 | -- | -- | -0.155 | -- | 0.4007 | 3 | 5.9 | 14.5 |
| 417.66 | 0.954 | 3.11 | -- | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 367.79 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 2 | 367.85 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 6 | 367.87 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 10 | 367.87 | wind | 5.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 11 | 367.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 5 |
| 31 | 367.97 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 53 | 368.02 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 3 |
| 57 | 368.02 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 61 | 374.36 | precipitation | 0.1 | 10 | > th | dose independent | sin | 3 | NA |
| 62 | 374.48 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 3 | NA |
| 64 | 374.74 | precipitation | 0.1 | 10 | < th | dose independent | sin | 2 | NA |
| 65 | 374.74 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 2 | NA |
| 82 | 378.45 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 96 | 378.45 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 116 | 381.58 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 131 | 383.76 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 20 |
| 133 | 383.80 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 136 | 383.88 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 20 |
| 138 | 383.94 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 144 | 384.36 | temperature | 25.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 146 | 384.38 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 10 |
| 156 | 384.42 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 160 | 384.42 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 164 | 384.46 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 8 |
| 170 | 384.53 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 185 | 384.58 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 213 | 384.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 19 |
| 346 | 387.63 | wind | 5.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 355 | 387.89 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 380 | 389.28 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 385 | 389.60 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 405 | 390.31 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 22 | 9 |
| 413 | 390.43 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 23 |
| 414 | 390.56 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 8 |
| 419 | 390.60 | precipitation | 0.1 | 90 | > th | dose independent | sin | 6 | NA |
| 429 | 390.84 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 6 | NA |
| 431 | 390.86 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 5 |
| 445 | 391.04 | precipitation | 0.1 | 90 | < th | dose independent | sin | 6 | NA |
| 446 | 391.04 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 6 | NA |
| 449 | 391.15 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 450 | 391.15 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 451 | 391.15 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 15 |
| 489 | 391.15 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 23 |
| 501 | 391.15 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 506 | 391.18 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 23 |
| 507 | 391.20 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 22 | 13 |
| 513 | 391.30 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 13 |
| 548 | 391.45 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 555 | 391.48 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 22 | 13 |
| 646 | 391.96 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 694 | 392.63 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 708 | 392.89 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 723 | 393.12 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 733 | 393.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 751 | 393.37 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 752 | 393.41 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 753 | 393.41 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 754 | 393.42 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 756 | 393.48 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 758 | 393.48 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 759 | 393.48 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 797 | 393.48 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 813 | 393.58 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 13 |
| 855 | 393.87 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 14 |
| 859 | 393.90 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 1 |
| 878 | 394.04 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 910 | 394.17 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |