BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0546900 Os09g0546900|AK062365
(144 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0546900 Similar to Auxin induced protein 300 3e-82
Os09g0546000 Similar to Auxin induced protein 278 8e-76
Os09g0546800 Similar to Auxin induced protein 197 2e-51
Os09g0546500 Similar to Auxin induced protein 196 5e-51
Os09g0546100 Auxin responsive SAUR protein family protein 195 1e-50
Os09g0547100 Similar to Auxin induced protein 191 2e-49
Os09g0546233 186 6e-48
Os09g0546300 Similar to Auxin induced protein 185 9e-48
Os09g0545280 Similar to Auxin induced protein 166 6e-42
Os09g0545500 162 1e-40
Os08g0550700 Similar to Auxin induced protein 161 2e-40
Os09g0547000 Similar to Auxin induced protein 155 9e-39
Os09g0545700 Similar to Auxin induced protein 151 2e-37
Os09g0546700 149 6e-37
Os09g0546266 149 8e-37
Os09g0545900 141 1e-34
Os03g0290100 122 1e-28
Os03g0368100 120 3e-28
Os07g0475700 Auxin responsive SAUR protein family protein 71 2e-13
>Os09g0546900 Similar to Auxin induced protein
Length = 144
Score = 300 bits (767), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL
Sbjct: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV
Sbjct: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
Query: 121 KSCHYGNGFAQSLGSVQQVAASSF 144
KSCHYGNGFAQSLGSVQQVAASSF
Sbjct: 121 KSCHYGNGFAQSLGSVQQVAASSF 144
>Os09g0546000 Similar to Auxin induced protein
Length = 144
Score = 278 bits (712), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 131/144 (90%), Positives = 139/144 (96%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISAKRLAQM KKWQR+AA GRKR+TWT PKATD+CCSSVAVKGHCIMYTADGRRFEVPL
Sbjct: 1 MISAKRLAQMVKKWQRMAAFGRKRLTWTAPKATDKCCSSVAVKGHCIMYTADGRRFEVPL 60
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
AFLATTIFAELLR+SQEEFGFT+DGGITLPCDAEVMEYV+CLL+RNASEEVVRAFLSTIV
Sbjct: 61 AFLATTIFAELLRISQEEFGFTSDGGITLPCDAEVMEYVMCLLKRNASEEVVRAFLSTIV 120
Query: 121 KSCHYGNGFAQSLGSVQQVAASSF 144
K CHYG+GFAQSLG VQQVAASSF
Sbjct: 121 KPCHYGSGFAQSLGFVQQVAASSF 144
>Os09g0546800 Similar to Auxin induced protein
Length = 141
Score = 197 bits (502), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISA+R+AQ+AKKWQR+AALGRKR+T K ECCSS+A KGHC MYTADG RFEVPL
Sbjct: 1 MISARRVAQLAKKWQRMAALGRKRLT-VRAKQDQECCSSMAGKGHCAMYTADGSRFEVPL 59
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
A+L T +F+ELLRMSQEEFGF+ DG I LPCDA VMEY +CLLRRNAS EV +A LS++V
Sbjct: 60 AYLGTAVFSELLRMSQEEFGFSIDGRIMLPCDAAVMEYAMCLLRRNASVEVEKALLSSMV 119
Query: 121 KSCHYGNGFAQSLGSVQQVA 140
SCHY ++G QQ++
Sbjct: 120 ASCHYTGSMVPTVGVNQQIS 139
>Os09g0546500 Similar to Auxin induced protein
Length = 144
Score = 196 bits (498), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 111/143 (77%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MIS KR+AQ+AKKW+R+AA GRKR+T P+ + C + VA KG+CI+YTADG RFEVPL
Sbjct: 1 MISTKRIAQLAKKWRRMAAKGRKRLTMMAPQEAEGCSTMVAGKGYCIVYTADGMRFEVPL 60
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
+L T +F ELLRMSQEEFGFT+DG ITLPCDA VMEYV+CLLRRNAS +V +AFLS++
Sbjct: 61 RYLGTMVFGELLRMSQEEFGFTSDGKITLPCDAMVMEYVMCLLRRNASVDVEKAFLSSMA 120
Query: 121 KSCHYGNGFAQSLGSVQQVAASS 143
SCHY N SLG QVA S
Sbjct: 121 ISCHYANSTTPSLGVNMQVAICS 143
>Os09g0546100 Auxin responsive SAUR protein family protein
Length = 141
Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISA+RLAQ+AKKWQR+AAL RKR+T K +ECC+SVA KGHC+MYTADG RFEVPL
Sbjct: 1 MISARRLAQLAKKWQRMAALERKRLTMKA-KENEECCTSVAGKGHCVMYTADGSRFEVPL 59
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
A+L T +F+ELLRMSQEEFGFT+DG I LPCDA VMEY +CLL+RNAS EV +A LS++V
Sbjct: 60 AYLGTAVFSELLRMSQEEFGFTSDGRIMLPCDAVVMEYAMCLLKRNASAEVEKALLSSMV 119
Query: 121 KSCHYGNGFAQSLGSVQQVA 140
CHY ++G Q ++
Sbjct: 120 APCHYTGCMVPTVGVNQHIS 139
>Os09g0547100 Similar to Auxin induced protein
Length = 150
Score = 191 bits (484), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 115/147 (78%), Gaps = 4/147 (2%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWT-TPKATDE---CCSSVAVKGHCIMYTADGRRF 56
MISAKR+AQ+AKKW+R+AALGRKR+T + T AT+E C ++VA KGHC +YTADG RF
Sbjct: 3 MISAKRIAQLAKKWRRMAALGRKRLTMSSTAMATEEAQGCSTAVAGKGHCAIYTADGARF 62
Query: 57 EVPLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFL 116
EVPLA+L T + ELL MS+EE+GF+ DG ITLPCDA VMEYVLCLL RNAS EV +AFL
Sbjct: 63 EVPLAYLGTAVLGELLTMSREEYGFSGDGKITLPCDAMVMEYVLCLLGRNASAEVEKAFL 122
Query: 117 STIVKSCHYGNGFAQSLGSVQQVAASS 143
S++V CHY + SLG+ QQVA S
Sbjct: 123 SSMVMPCHYASCVTPSLGACQQVAVCS 149
>Os09g0546233
Length = 140
Score = 186 bits (471), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 2/140 (1%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISAKRL Q+AK WQR+AALGRKRI + T+EC +SVAVKGHC+MYTADGRRFEVPL
Sbjct: 1 MISAKRLVQLAK-WQRMAALGRKRIMGKA-QETEECSTSVAVKGHCVMYTADGRRFEVPL 58
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
A+L T +F+ELLRMSQEEFGFT+DG I LPCDA MEY +CLL+RN S EVV A LS+++
Sbjct: 59 AYLGTVVFSELLRMSQEEFGFTSDGRIVLPCDAAEMEYAMCLLKRNPSVEVVDALLSSML 118
Query: 121 KSCHYGNGFAQSLGSVQQVA 140
CH ++G QQ++
Sbjct: 119 IRCHCTGSMVPTVGVNQQIS 138
>Os09g0546300 Similar to Auxin induced protein
Length = 157
Score = 185 bits (470), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISAKRL Q+AKKWQR+AALGRKR+ + T+EC +SVAVKGHC+MYTADGRRFEVPL
Sbjct: 1 MISAKRLVQLAKKWQRMAALGRKRV-MAAAQETEECSTSVAVKGHCVMYTADGRRFEVPL 59
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV 120
+L +F ELLRMSQEEFGFT+DG I LPCDA MEY +CLL+RNAS +VV A LS+++
Sbjct: 60 VYLGMRVFIELLRMSQEEFGFTSDGRIMLPCDAAEMEYAMCLLKRNASADVVNALLSSML 119
Query: 121 KSCHY 125
SC Y
Sbjct: 120 TSCRY 124
>Os09g0545280 Similar to Auxin induced protein
Length = 171
Score = 166 bits (419), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWT--TPKATDECCSSVAVKGHCIMYTADGRRFEV 58
MI+ KRL +AKKWQ +AALGR+R+T T T + C S++A KGHCI+YTADG RF V
Sbjct: 27 MINPKRLVHLAKKWQHMAALGRRRLTITGATKEGNLRCSSAIADKGHCIIYTADGERFGV 86
Query: 59 PLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLST 118
PL +L+TT+F ELLR+S++EFGFT + ITLPC+A VMEYV+CLLRR SEEV +A +S+
Sbjct: 87 PLTYLSTTVFGELLRLSEDEFGFTGEEKITLPCEAAVMEYVMCLLRRKPSEEVEQAVVSS 146
Query: 119 IVKSCHY 125
+V C+Y
Sbjct: 147 VVMPCNY 153
>Os09g0545500
Length = 138
Score = 162 bits (409), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 93/126 (73%), Gaps = 10/126 (7%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECC--SSVAVKGHCIMYTADGRRFEV 58
MI +KRLAQ+A++ QR+ T + D CC S VA KG C MYTADGRRF+V
Sbjct: 1 MIHSKRLAQLARRLQRVKT--------TAAREDDACCTTSPVADKGRCTMYTADGRRFKV 52
Query: 59 PLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLST 118
PL +L TT+F ELLRMSQEEFGF DG ITLPCDA VMEYV+CLLRRNASE+V RAFLS+
Sbjct: 53 PLPYLGTTVFGELLRMSQEEFGFAGDGRITLPCDAAVMEYVMCLLRRNASEDVERAFLSS 112
Query: 119 IVKSCH 124
+V SC
Sbjct: 113 VVMSCQ 118
>Os08g0550700 Similar to Auxin induced protein
Length = 143
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 102/134 (76%), Gaps = 3/134 (2%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSS--VAVKGHCIMYTADGRRFEV 58
MIS+K+L Q++KKWQ + A+GRKR+T + + S VA KG+C++Y+ DGRRFE+
Sbjct: 1 MISSKKLVQLSKKWQGMGAIGRKRVTASEKEIIHHSSCSSSVAGKGNCVVYSCDGRRFEI 60
Query: 59 PLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLST 118
PLA+L T +F ELLRMSQEEFGF++DG ITLPCDA VMEYV+CLL R ASEEV +A LS+
Sbjct: 61 PLAYLRTPVFVELLRMSQEEFGFSSDGRITLPCDAAVMEYVMCLLGREASEEVEKALLSS 120
Query: 119 IVKSC-HYGNGFAQ 131
IV C H+ + AQ
Sbjct: 121 IVMPCSHHPSRMAQ 134
>Os09g0547000 Similar to Auxin induced protein
Length = 141
Score = 155 bits (392), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 97/128 (75%), Gaps = 11/128 (8%)
Query: 1 MISAKRLAQMAKKWQR-IAALGRKRITWTTPKATDECCSS----VAVKGHCIMYTADGRR 55
MIS+++LAQ+ KKWQR +A+ GR+ + D CCS+ VA KGHC++YT DG R
Sbjct: 1 MISSRKLAQLGKKWQRMVASSGRQT------ASIDGCCSTATAYVADKGHCVLYTTDGAR 54
Query: 56 FEVPLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAF 115
FEVPL +L T IF ELLR+SQEEFGF ++ ITLPCDA VMEYV+CL+RR+ASEE+ +A
Sbjct: 55 FEVPLMYLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKAL 114
Query: 116 LSTIVKSC 123
LS+IV+ C
Sbjct: 115 LSSIVRPC 122
>Os09g0545700 Similar to Auxin induced protein
Length = 141
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 95/129 (73%), Gaps = 8/129 (6%)
Query: 1 MISAKRLAQMAKKWQ-RIAALGRKRITWTTPKATDECCS----SVAVKGHCIMYTADGRR 55
MISAK+LAQ+AKK Q R+A+ G R A D+CCS S+A KGHC +YTADG R
Sbjct: 1 MISAKKLAQLAKKLQMRMASAGGSRQKAVV--AADDCCSTASLSLAGKGHCAVYTADGAR 58
Query: 56 FEVPLAFLATTIFAELLRMSQEEFGFTTDGG-ITLPCDAEVMEYVLCLLRRNASEEVVRA 114
FEVPL +L T +F ELL MS+EEFGF D G ITLPCDA VMEYV+CLL R+ASEEV RA
Sbjct: 59 FEVPLPYLGTPLFGELLTMSREEFGFAGDDGRITLPCDASVMEYVMCLLSRDASEEVERA 118
Query: 115 FLSTIVKSC 123
FLS++ + C
Sbjct: 119 FLSSMARPC 127
>Os09g0546700
Length = 144
Score = 149 bits (377), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 90/127 (70%), Gaps = 14/127 (11%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKR------ITWTTPKATDECCSSVAVKGHCIMYTADGR 54
MI +K+LAQ+A+K QRI R T T+P S VA KGHC +YT+DG
Sbjct: 1 MIHSKKLAQLARKLQRIKTAASNREDDDAGCTSTSP-------SPVADKGHCAVYTSDGA 53
Query: 55 RFEVPLAFLATTIFAELLRMSQEEFGFT-TDGGITLPCDAEVMEYVLCLLRRNASEEVVR 113
RFEVPL +L TT+F ELLRMSQEEFGF DG ITLPCDA MEYV+CLLRRNASEEV R
Sbjct: 54 RFEVPLPYLGTTVFVELLRMSQEEFGFAGGDGRITLPCDAAAMEYVMCLLRRNASEEVER 113
Query: 114 AFLSTIV 120
AFLS++V
Sbjct: 114 AFLSSVV 120
>Os09g0546266
Length = 110
Score = 149 bits (375), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
MISAKRL Q+AKKWQRIAALGRKRI + T+EC +SVAVKGHC+MYTADGRRFEVPL
Sbjct: 1 MISAKRLVQLAKKWQRIAALGRKRIM-AKAQETEECSTSVAVKGHCVMYTADGRRFEVPL 59
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAE 94
+L T +F+ELLRMSQEEFGFT+DG I LP DAE
Sbjct: 60 TYLGTAVFSELLRMSQEEFGFTSDGRIVLPFDAE 93
>Os09g0545900
Length = 285
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 87/116 (75%), Gaps = 11/116 (9%)
Query: 1 MISAKRLAQMAKKWQR-IAALGRKRITWTTPKATDECCSS----VAVKGHCIMYTADGRR 55
MIS+++LAQ+AKKWQ +A+ GR+ D CCS+ VA KGHC++YT DG R
Sbjct: 176 MISSRKLAQLAKKWQMMVASSGRQTAN------IDGCCSTATVYVADKGHCVLYTTDGAR 229
Query: 56 FEVPLAFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEV 111
FEVPL +L T +F ELLRMSQEEFGFT+D ITLP DA VMEYV+CL+RR+ASEEV
Sbjct: 230 FEVPLMYLNTVVFCELLRMSQEEFGFTSDYKITLPYDAAVMEYVMCLIRRDASEEV 285
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 9/104 (8%)
Query: 1 MISAKRLAQMAKKWQR---IAALGRKRITWTTPKATDECCS--SVAVKGHCIMYTADGRR 55
MI AK+LAQ+A+K Q+ A+ G R T T + +CCS S+A KGHC +YTADG R
Sbjct: 1 MIHAKKLAQLARKLQQKMVSASAGSGRHTAGT---SHDCCSTASLAGKGHCAVYTADGAR 57
Query: 56 FEVPLAFLATTIFAELLRMSQEEFGFTT-DGGITLPCDAEVMEY 98
FEVPL +L T +F ELL MS EEFGF + DG ITL CD VME+
Sbjct: 58 FEVPLPYLGTAVFGELLTMSHEEFGFASEDGRITLTCDTSVMEW 101
>Os03g0290100
Length = 207
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 80/122 (65%), Gaps = 6/122 (4%)
Query: 23 KRITWT-TPKATDECCS----SVAVKGHCIMYTADGRRFEVPLAFLATTIFAELLRMSQE 77
+++ WT T T +CCS S+A KGH +YTADG RFEVPL +L +F ELL MSQE
Sbjct: 10 QQVRWTGTAGTTGDCCSTASSSLAGKGHSAVYTADGARFEVPLVYLGMMVFGELLAMSQE 69
Query: 78 EFGFTTDGG-ITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIVKSCHYGNGFAQSLGSV 136
EFGF +D G ITL CDA VMEYV+CL+ +ASEEV R FLS + SCH G + V
Sbjct: 70 EFGFASDDGRITLTCDALVMEYVMCLISIDASEEVERVFLSFMASSCHCVGGTSHQFYDV 129
Query: 137 QQ 138
+
Sbjct: 130 GE 131
>Os03g0368100
Length = 215
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 24 RITWT-TPKATDECCS----SVAVKGHCIMYTADGRRFEVPLAFLATTIFAELLRMSQEE 78
++ WT T T +CCS S+A KGH YTADG RFEVPL +L T + ELL MSQEE
Sbjct: 11 QVQWTATAGTTGDCCSTASSSLAGKGHSAEYTADGARFEVPLVYLGTMVLGELLVMSQEE 70
Query: 79 FGFTTDGG-ITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIVKSCHYGNGFAQSLGSVQ 137
FGF D G I L CDA VME V+CL+ R+ASEEV R FLS + SCH G + SV
Sbjct: 71 FGFAGDDGRIMLTCDASVMEQVMCLISRDASEEVERMFLSCMASSCHSVRGISHQFYSVG 130
Query: 138 Q 138
+
Sbjct: 131 E 131
>Os07g0475700 Auxin responsive SAUR protein family protein
Length = 120
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 1 MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL 60
M+S+ RLA++++KW + G ++T +P A C +GH YT DG RF VP+
Sbjct: 1 MVSSLRLAEISRKW---SGSGSSKVT--SPTAAAAACP----RGHFAAYTRDGSRFFVPI 51
Query: 61 AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLR 104
A LA+ F ELL ++EEFG I LPC A+ + +L R
Sbjct: 52 ACLASDTFRELLSTAEEEFGSPGGRPIVLPCSADRLHQILAAFR 95
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,549,626
Number of extensions: 161199
Number of successful extensions: 554
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 535
Number of HSP's successfully gapped: 20
Length of query: 144
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 53
Effective length of database: 12,284,327
Effective search space: 651069331
Effective search space used: 651069331
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 151 (62.8 bits)