BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0510700 Os09g0510700|AK073117
(836 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0510700 Similar to GCN4-complementing protein homolog 1677 0.0
Os08g0537600 Arf GTPase activating protein family protein 1225 0.0
Os02g0632500 Arf GTPase activating protein family protein 712 0.0
Os07g0563800 Arf GTPase activating protein family protein 103 7e-22
Os02g0198300 Arf GTPase activating protein family protein 99 1e-20
Os02g0722500 Arf GTPase activating protein family protein 92 1e-18
Os05g0382000 Similar to ABL164Cp 88 2e-17
Os01g0951100 Arf GTPase activating protein family protein 86 1e-16
Os10g0574800 Similar to ARF GAP-like zinc finger-containing... 79 1e-14
Os03g0854100 Similar to ARF GAP-like zinc finger-containing... 78 2e-14
Os03g0278400 Similar to ADP ribosylation GTPase-like protei... 77 5e-14
Os06g0609450 Arf GTPase activating protein family protein 70 1e-11
>Os09g0510700 Similar to GCN4-complementing protein homolog
Length = 836
Score = 1677 bits (4344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/836 (97%), Positives = 813/836 (97%)
Query: 1 MFFTRLDDSPMFRKQIQSXXXXXXXXXXXXXXFHKGCRKYTEGLGEAYDGDIAFASSLEA 60
MFFTRLDDSPMFRKQIQS FHKGCRKYTEGLGEAYDGDIAFASSLEA
Sbjct: 1 MFFTRLDDSPMFRKQIQSLEEGSELLRERCLRFHKGCRKYTEGLGEAYDGDIAFASSLEA 60
Query: 61 FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVENMLNDKLLQFVDIDLHDVKD 120
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVENMLNDKLLQFVDIDLHDVKD
Sbjct: 61 FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVENMLNDKLLQFVDIDLHDVKD 120
Query: 121 ARKRFDKASLLYDQARERYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTALSNIE 180
ARKRFDKASLLYDQARERYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTALSNIE
Sbjct: 121 ARKRFDKASLLYDQARERYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTALSNIE 180
Query: 181 AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER 240
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER
Sbjct: 181 AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER 240
Query: 241 MQEFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLS 300
MQEFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLS
Sbjct: 241 MQEFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLS 300
Query: 301 KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYTNQRSSAPSEHGSGLLSRWFSSH 360
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYTNQRSSAPSEHGSGLLSRWFSSH
Sbjct: 301 KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYTNQRSSAPSEHGSGLLSRWFSSH 360
Query: 361 YHGGVHDEKSVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIE 420
YHGGVHDEKSVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIE
Sbjct: 361 YHGGVHDEKSVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIE 420
Query: 421 KITGVIASLLSSQSPERRLLSSPKGSGHNRTAXXXXXXXXXTELDHSISEDCMLERNSGS 480
KITGVIASLLSSQSPERRLLSSPKGSGHNRTA TELDHSISEDCMLERNSGS
Sbjct: 421 KITGVIASLLSSQSPERRLLSSPKGSGHNRTASESSSFSSSTELDHSISEDCMLERNSGS 480
Query: 481 GYFDHSGRAIQHHRTSMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSG 540
GYFDHSGRAIQHHRTSMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSG
Sbjct: 481 GYFDHSGRAIQHHRTSMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSG 540
Query: 541 VHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRA 600
VHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRA
Sbjct: 541 VHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRA 600
Query: 601 DGLENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNN 660
DGLENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNN
Sbjct: 601 DGLENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNN 660
Query: 661 KKGVYSLIVGSNADVNLTYGQTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLERIS 720
KKGVYSLIVGSNADVNLTYGQTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLERIS
Sbjct: 661 KKGVYSLIVGSNADVNLTYGQTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLERIS 720
Query: 721 PRDSLSLASTSARIDELDDCVEGLSLLHLACRVADVGMVELLLQYGANVNSADSRGRTPL 780
PRDSLSLASTSARIDELDDCVEGLSLLHLACRVADVGMVELLLQYGANVNSADSRGRTPL
Sbjct: 721 PRDSLSLASTSARIDELDDCVEGLSLLHLACRVADVGMVELLLQYGANVNSADSRGRTPL 780
Query: 781 HHSILKGRHMFAKLLLSRGADSQATDRDGRTALQYAIDSGTIDDEEILVLLEDPSR 836
HHSILKGRHMFAKLLLSRGADSQATDRDGRTALQYAIDSGTIDDEEILVLLEDPSR
Sbjct: 781 HHSILKGRHMFAKLLLSRGADSQATDRDGRTALQYAIDSGTIDDEEILVLLEDPSR 836
>Os08g0537600 Arf GTPase activating protein family protein
Length = 831
Score = 1225 bits (3169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/838 (73%), Positives = 691/838 (82%), Gaps = 9/838 (1%)
Query: 1 MFFTRLDDSPMFRKQIQSXXXXXXXXXXXXXXFHKGCRKYTEGLGEAYDGDIAFASSLEA 60
M F +LDDSPM R QIQS FHKGCRKYTEGLGEAYDGDIAFASSLE
Sbjct: 1 MLFAKLDDSPMLRTQIQSLEESAEILRERCLKFHKGCRKYTEGLGEAYDGDIAFASSLET 60
Query: 61 FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVENMLNDKLLQFVDIDLHDVKD 120
FGGGHNDPISVAFGGPVMTKFTIALRE+GTYKEVLRSQVE+MLND+LL FVDIDLHDVKD
Sbjct: 61 FGGGHNDPISVAFGGPVMTKFTIALRELGTYKEVLRSQVEHMLNDRLLNFVDIDLHDVKD 120
Query: 121 ARKRFDKASLLYDQARERYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTALSNIE 180
ARKRFDKASLLYDQ R++YLSLKKGTR D+ TA+EDELH+ARSSFEQARFNLVT++S+IE
Sbjct: 121 ARKRFDKASLLYDQVRDKYLSLKKGTRADITTAIEDELHNARSSFEQARFNLVTSISHIE 180
Query: 181 AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER 240
AKKRFEFLEAVS TMD+HLRYFKQGY+LLHQMEPYINQVLAYAQQSRER+N EQA+LVER
Sbjct: 181 AKKRFEFLEAVSSTMDSHLRYFKQGYDLLHQMEPYINQVLAYAQQSRERANKEQASLVER 240
Query: 241 MQEFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLS 300
M E+K+QIDRE R S NG+ D+ NGDGIQ I RSSHKMIEAVMQSASKGKVQTIRQGYLS
Sbjct: 241 MHEYKKQIDREIRLS-NGLTDAHNGDGIQTIARSSHKMIEAVMQSASKGKVQTIRQGYLS 299
Query: 301 KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYTNQRSSA--PSEHGSGLLSRWFS 358
KRSSNLR DWKRRFFVLDSRGMLYYYRKQ +R G ++ S P+EHGSGLLSR FS
Sbjct: 300 KRSSNLRADWKRRFFVLDSRGMLYYYRKQINRTPGGCSSHPRSIGNPTEHGSGLLSRLFS 359
Query: 359 SHYHGGVHDEKSVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAMDQMDW 418
SHYHG +HDEKSVARHTVNLLTSTIK DA+QSDLRFCFRIISPTK YTLQAESA+DQMDW
Sbjct: 360 SHYHGIIHDEKSVARHTVNLLTSTIKVDAEQSDLRFCFRIISPTKVYTLQAESAIDQMDW 419
Query: 419 IEKITGVIASLLSSQSPERRLLSSPKGSGHNRTAXXXXXXXXXTELDHSISEDCMLERNS 478
IEKITGVIASLLSSQSPE+ L SPK GH+ + +L+ S+ +D LE+N+
Sbjct: 420 IEKITGVIASLLSSQSPEQCFLLSPKSCGHD-GSASESSSFTSQDLEPSMYDDLTLEKNT 478
Query: 479 GSGYFDHSGRAIQHHRTSMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIEC 538
G+G H R +H+T+MKP+KPIDLLRKV GN IC DCG+ EPDWASLNLG LLCIEC
Sbjct: 479 GNG--QHDVRGTHYHKTNMKPEKPIDLLRKVDGNIICVDCGSMEPDWASLNLGALLCIEC 536
Query: 539 SGVHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNS 598
SGVHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGN F N +WE++LPSS + + D
Sbjct: 537 SGVHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNKFVNDVWEEVLPSSKNGESDDKL 596
Query: 599 RADGLENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVRKLNMDDSLVAQQMWENVSS 658
RA GL+ H SKPKHSD + KEKFIHAKYA++++VRK +MD+ +AQQMW+NV++
Sbjct: 597 RAHGLDTAWH-FTVSKPKHSDPFSAKEKFIHAKYADKEFVRKYSMDEIQLAQQMWDNVTA 655
Query: 659 NNKKGVYSLIVGSNADVNLTYGQTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLER 718
N+K+ VYSLIV S A+VNL YG+ S++S T QE +SPSDGS FD S E+
Sbjct: 656 NDKRAVYSLIVQSRANVNLVYGEMSYSSRSTT-GRSSQQEHSSSPSDGSPVFFDCHSHEK 714
Query: 719 ISPRDSLSLASTSARIDELDDCVEGLSLLHLACRVADVGMVELLLQYGANVNSADSRGRT 778
+SPR+ LS ASTS+R+D+ ++ EG SLLHLAC VADVGMVELLLQYGANVN+ DSRGRT
Sbjct: 715 VSPREPLSPASTSSRVDDGEERCEGFSLLHLACHVADVGMVELLLQYGANVNAIDSRGRT 774
Query: 779 PLHHSILKGRHMFAKLLLSRGADSQATDRDGRTALQYAIDSGTIDDEEILVLLEDPSR 836
PLH ILKGRH+ AKLLLSRGA+ Q D+DGRTALQ AID GT DD EILVLLED +R
Sbjct: 775 PLHQCILKGRHIHAKLLLSRGANPQVADQDGRTALQCAIDGGTSDD-EILVLLEDYTR 831
>Os02g0632500 Arf GTPase activating protein family protein
Length = 760
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/829 (44%), Positives = 519/829 (62%), Gaps = 74/829 (8%)
Query: 3 FTRLDDSPMFRKQIQSXXXXXXXXXXXXXXFHKGCRKYTEGLGEAYDGDIAFASSLEAFG 62
FT+L+DSPMFRKQ+ S HKGC+++ L E Y GD+ FA +LEAFG
Sbjct: 4 FTKLEDSPMFRKQVNSMEQLSDELKQRCSNLHKGCKRFMGSLDEGYAGDLTFADALEAFG 63
Query: 63 GGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVENMLNDKLLQFVDIDLHDVKDAR 122
G +DP+SVA GGPVM+KFT A RE+GTYKE+LRSQV++ML+++L+QF+D+DLH VKD R
Sbjct: 64 AGQDDPVSVAIGGPVMSKFTTAFRELGTYKELLRSQVDHMLSERLMQFIDVDLHGVKDCR 123
Query: 123 KRFDKASLLYDQARERYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTALSNIEAK 182
+R D+A++ YDQARE+++S++KGTR +V T +E++LH+A+S+FE+ RFNLV ALSNIEAK
Sbjct: 124 QRLDRATVGYDQAREKFVSVRKGTRAEVVTGLEEDLHNAKSAFERCRFNLVHALSNIEAK 183
Query: 183 KRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVERMQ 242
K++EFLE++S MDAHLRYFKQGYELL QMEP+I+QVL YAQQS+E + EQ L +R+Q
Sbjct: 184 KKYEFLESISAVMDAHLRYFKQGYELLSQMEPFIHQVLTYAQQSKEMAINEQDKLAKRIQ 243
Query: 243 EFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLSKR 302
E++ Q + + + ++ S +GDGI +G S+K IEA+MQS + G+VQ I+QGYL KR
Sbjct: 244 EYRTQEEIANLRMASNVDTSTSGDGIHVVGLQSYKKIEALMQSTANGEVQIIKQGYLFKR 303
Query: 303 SSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYTNQRSSAPSEHGSGLLSRWFSSHYH 362
S N R +WKRRFFVLDS G L+YY N S G +Q+++ G+G+ SR+ +
Sbjct: 304 SENSR-EWKRRFFVLDSHGTLFYY--GNKGQSQGAASQQTAG---EGTGVFSRFRFLNQK 357
Query: 363 GGVHDEKSVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIEKI 422
+ +++ H ++L TSTIK DA+++DLRFCFR+ISP K YTLQAES DQ DWIEK+
Sbjct: 358 APTQGDNALSCHKIDLRTSTIKIDAEENDLRFCFRVISPMKAYTLQAESGADQKDWIEKV 417
Query: 423 TGVIASLLSSQSPERRLLSSPKGSGHNRTAXXXXXXXXXTELDHSISEDCMLERNSGSGY 482
TGVIASLL+ P + + + H +S+ + E S G+
Sbjct: 418 TGVIASLLNLPFPRQVSYGNLEAEHHGSA--------------NSVDSLSLEENKSPEGH 463
Query: 483 FDHSGRAIQHHRTSMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVH 542
D + LR + GN+ CA+C + +PDWASLNLGIL+CIECSG H
Sbjct: 464 -----------------DDIFNHLRNIPGNDSCAECRSPDPDWASLNLGILICIECSGAH 506
Query: 543 RNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRADG 602
RNLGVHISKVRSL LDV+VWEP +++LF LGN + N+IWE MLP D G N D
Sbjct: 507 RNLGVHISKVRSLRLDVKVWEPVIMDLFHELGNDYTNSIWEAMLPKE---DQGINEFNDA 563
Query: 603 LENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNNKK 662
+ L KPK +D ++KE++I KY ++ + K D + + + E V +N+ +
Sbjct: 564 I------LFIEKPKPTDAFSIKERYIQTKYVDKLLIAK---DTNQITIDILEAVRTNDVR 614
Query: 663 GVYSLIVGSNADVNLTYGQTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLERISPR 722
Y ++V ++ N+ Y + L + PS + FD +S +
Sbjct: 615 AAYRILVLADVSPNMIYDE-------------LNNDVHHDPSVTDGKLFDPASCD----- 656
Query: 723 DSLSLASTSARIDELDDCVEGLSLLHLACRVADVGMVELLLQYGANVNSADSRGRTPLHH 782
+ S + + C++G SLLH+AC+ M ELLL +GA++N D GRTPLHH
Sbjct: 657 ----VKDDSGKP---EGCLQGCSLLHIACQYGHSIMAELLLLFGADINKQDFHGRTPLHH 709
Query: 783 SILKGRHMFAKLLLSRGADSQATDRDGRTALQYAIDSGTIDDEEILVLL 831
+ + K LL RGA + D G TAL+ ++ G I DE++ +L
Sbjct: 710 CVRRKNDALTKHLLKRGARTTIKDGGGLTALERRMELGAITDEDLFILF 758
>Os07g0563800 Arf GTPase activating protein family protein
Length = 476
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 31/138 (22%)
Query: 503 IDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVW 562
++ L ++ N CADC + P WAS+NLGI +C++CSG+HR+LGVHISKVRS TLD W
Sbjct: 19 LEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLD--TW 76
Query: 563 EPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRADGLENTSHNLIFSKPKHSDHIA 622
P + QS+GN +N+ WE L P + D +
Sbjct: 77 LPEQVAFIQSMGNEKSNSYWEAEL----------------------------PPNYDRVG 108
Query: 623 VKEKFIHAKYAERDYVRK 640
+ E FI AKY ++ ++ +
Sbjct: 109 I-ENFIRAKYEDKRWIPR 125
>Os02g0198300 Arf GTPase activating protein family protein
Length = 320
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 25/128 (19%)
Query: 512 NNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPSVI-NLF 570
N ICADC A +P WAS N+G+ +C++CSGVHR+LG HISKV S+TLD W + I N+
Sbjct: 23 NRICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKVLSVTLD--QWSDNEIDNVI 80
Query: 571 QSLGNTFANTIWEDMLPSSSSVDHGDNSRADGLENTSHNLIFSKPKHSDHIAVKEKFIHA 630
+ GN+ AN I+E LP + S H D+++ + +EKFI +
Sbjct: 81 EVGGNSHANAIYETFLPQNHSKPHPDSTQEE----------------------REKFIRS 118
Query: 631 KYAERDYV 638
KY ++++
Sbjct: 119 KYELQEFL 126
>Os02g0722500 Arf GTPase activating protein family protein
Length = 332
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 32/156 (20%)
Query: 492 HHRTSMKPDKPI--------DLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHR 543
+H +K +KP+ DL+ K N ICADCGA +P WAS N+G+ LC++C VHR
Sbjct: 5 NHYQHIKSNKPVLGKARKLKDLMLKS-DNRICADCGAPDPKWASANIGVFLCLKCGDVHR 63
Query: 544 NLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRADGL 603
LG +SKV S+TLD + + ++ + GN++AN+I+E LP DH
Sbjct: 64 ALGPDVSKVLSVTLDDWS-DSDIDSMLEIGGNSYANSIYESFLPK----DH--------- 109
Query: 604 ENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVR 639
KPK + + KFI AKY +D+++
Sbjct: 110 ---------PKPKMDSTMEYRTKFIRAKYETQDFLK 136
>Os05g0382000 Similar to ABL164Cp
Length = 395
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
Query: 503 IDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVW 562
++ L K N CADCG +P WA+L G L+CI+CSG HR+LGVHISKV S+ LD W
Sbjct: 63 LEHLLKQPANKFCADCGTPDPKWAALPFGALICIKCSGTHRSLGVHISKVISVNLD--EW 120
Query: 563 EPSVIN-LFQSLGNTFANTIWEDMLPSSSSVDHGDNSRADGLENTSHNLIFSKPKHSDHI 621
+N L S GN NT +E LP + F KP+H
Sbjct: 121 TDEEVNCLAGSGGNATVNTRYEAFLPEN----------------------FKKPRHDCTT 158
Query: 622 AVKEKFIHAKYAERDYV 638
+ FI KY + +V
Sbjct: 159 EERCNFIRKKYEFQQFV 175
>Os01g0951100 Arf GTPase activating protein family protein
Length = 381
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 511 GNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPSVINLF 570
N ICADCGA +P W SL G+ +CI+CSG HR+LGVHISKV S+ LD W +++
Sbjct: 61 ANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVVSVKLD--EWTDEQVDIL 118
Query: 571 -QSLGNTFANTIWEDMLPSS 589
S GN N I+E +P +
Sbjct: 119 ADSGGNAAVNMIYEAFIPEN 138
>Os10g0574800 Similar to ARF GAP-like zinc finger-containing protein ZIGA2
(Fragment)
Length = 407
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 506 LRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPS 565
LR N +C DC A P WAS+ G+ LCI+CS VHR+LGVH+S VRS LD W P
Sbjct: 20 LRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD--SWTPE 77
Query: 566 VINLFQSLGNTFANTIWE 583
+ + GN A ++
Sbjct: 78 QLKMMVYGGNNRAQAFFK 95
>Os03g0854100 Similar to ARF GAP-like zinc finger-containing protein ZIGA2
(Fragment)
Length = 412
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 506 LRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPS 565
L+ N +C DC A P WAS+ GI LC++CS VHR+LGVHI+ VRS LD W P
Sbjct: 16 LKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLD--SWTPD 73
Query: 566 VINLFQSLGNTFANTIWE 583
+ + GN A+ ++
Sbjct: 74 QLKMMAFGGNNRAHAFFK 91
>Os03g0278400 Similar to ADP ribosylation GTPase-like protein (Fragment)
Length = 453
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 506 LRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPS 565
L+ GN C DC P WAS++ G+ +C+ECSG HR LGVHIS VRS+T+D W +
Sbjct: 12 LQGQAGNKTCVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMD--SWTEA 69
Query: 566 VINLFQSLGN 575
+ ++ GN
Sbjct: 70 QLRKMEAGGN 79
>Os06g0609450 Arf GTPase activating protein family protein
Length = 79
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 512 NNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKV 552
N ICADC + +P WAS N+G+ +C++CSG+HR+LG HISKV
Sbjct: 20 NRICADCSSPDPKWASANIGVFICLKCSGIHRSLGTHISKV 60
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,869,470
Number of extensions: 1111417
Number of successful extensions: 3499
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 3482
Number of HSP's successfully gapped: 12
Length of query: 836
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 727
Effective length of database: 11,344,475
Effective search space: 8247433325
Effective search space used: 8247433325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)