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Os03g0854100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ARF GAP-like zinc finger-containing protein ZIGA2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0195) R2 : 0.454
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.932 (0.0495) R2dC : 0.425 R2C : 0.423
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.184 (0.041) R2dN8 : 0.0311 R2N8 : 0.0292
σ : 0.367
deviance : 61.61
__
_____
C
peak time of C : 3.82
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.89 0.315 11.4 -0.857 0.88 -1.08 0.318 4.07 0.277 4.04 30.2 2599 -- --
46.58 0.318 11.3 -0.265 0.876 -0.598 0.262 -- 0.176 4.28 29.56 2630 -- --
45.13 0.313 11.4 -0.847 0.881 -1.09 -- 4.08 0.295 4.07 30.26 2588 -- --
46.16 0.316 11.3 -0.137 0.875 -0.588 -- -- 0.198 4.07 29.5 2632 -- --
86.83 0.434 11.4 -0.711 -- -1.11 -- 3.39 0.352 -- 30.29 2620 -- --
60.97 0.366 11.3 0.0521 0.927 -- 0.447 -- 0.191 3.76 -- -- -- --
61.56 0.367 11.3 0.0456 0.931 -- -- -- 0.189 3.82 -- -- -- --
85.35 0.43 11.3 -0.143 -- -0.676 -- -- 0.314 -- 30.4 1231 -- --
46.61 0.318 11.3 -- 0.874 -0.556 -- -- 0.213 4.07 29.55 2634 -- --
109.32 0.489 11.3 0.0842 -- -- -- -- 0.214 -- -- -- -- --
61.61 0.367 11.3 -- 0.932 -- -- -- 0.184 3.82 -- -- -- --
85.56 0.431 11.3 -- -- -0.65 -- -- 0.348 -- 30.4 1224 -- --
109.51 0.488 11.3 -- -- -- -- -- 0.204 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.51 radiation 10 1440 < th dose dependent rect. 18 11
2 44.53 radiation 30 4320 > th dose independent rect. 16 16
4 44.58 radiation 30 4320 > th dose independent rect. 7 1
20 44.75 radiation 30 4320 < th dose independent rect. 7 1
21 44.89 radiation 1 720 > th dose dependent rect. 18 11
22 44.89 radiation 20 4320 > th dose dependent rect. 16 16
23 44.92 humidity 60 4320 < th dose dependent rect. 17 3
36 44.92 wind 3 43200 > th dose dependent rect. 23 17
37 44.94 humidity 60 14400 < th dose independent rect. 17 3
54 44.98 radiation 1 4320 < th dose independent rect. 18 11
55 44.98 wind 3 43200 > th dose dependent rect. 2 13
61 45.04 radiation 30 4320 < th dose independent rect. 24 8
67 45.09 radiation 1 1440 > th dose dependent rect. 18 1
91 45.10 radiation 30 4320 < th dose independent rect. 19 13
105 45.24 radiation 1 4320 < th dose independent rect. 18 2
115 45.30 temperature 20 270 > th dose independent rect. 13 17
116 45.30 wind 3 43200 > th dose dependent sin 4 NA
119 45.32 wind 5 43200 < th dose independent rect. 24 16
128 45.36 temperature 10 270 > th dose dependent rect. 14 16
136 45.38 wind 5 43200 > th dose independent rect. 2 14
137 45.38 wind 5 43200 > th dose independent rect. 24 16
152 45.39 humidity 50 4320 < th dose independent rect. 16 18
153 45.39 radiation 10 1440 < th dose dependent rect. 18 2
176 45.42 wind 3 43200 < th dose independent rect. 2 2
177 45.42 radiation 30 4320 < th dose independent rect. 17 15
183 45.44 humidity 50 4320 < th dose dependent rect. 16 18
204 45.47 radiation 30 14400 < th dose independent rect. 16 1
207 45.48 wind 3 43200 > th dose independent rect. 2 2
208 45.48 humidity 60 4320 > th dose independent rect. 18 10
222 45.51 radiation 30 14400 < th dose independent rect. 16 12
230 45.54 radiation 1 4320 > th dose independent rect. 18 11
241 45.57 radiation 1 720 > th dose independent rect. 18 11
246 45.57 wind 1 43200 > th dose dependent rect. 9 3
262 45.59 wind 9 43200 < th dose dependent rect. 9 3
264 45.60 humidity 50 4320 > th dose independent rect. 16 2
269 45.61 humidity 60 4320 > th dose independent rect. 18 2
278 45.62 wind 9 43200 < th dose dependent rect. 2 13
283 45.64 wind 7 43200 < th dose independent sin 5 NA
284 45.64 humidity 50 4320 > th dose independent rect. 16 4
287 45.65 wind 7 43200 > th dose independent sin 5 NA
288 45.65 wind 5 43200 < th dose independent sin 3 NA
296 45.66 radiation 1 4320 > th dose independent rect. 18 1
382 45.74 wind 5 43200 > th dose independent sin 3 NA
429 45.80 radiation 40 14400 < th dose dependent rect. 18 10
436 45.81 wind 1 43200 > th dose dependent rect. 8 6
459 45.84 radiation 30 14400 < th dose independent rect. 16 4
475 45.86 wind 9 43200 < th dose independent rect. 19 19
540 45.90 wind 7 43200 > th dose independent rect. 10 1
578 45.91 wind 7 43200 > th dose dependent rect. 9 5
590 45.92 humidity 70 270 > th dose dependent rect. 1 5
591 45.92 wind 9 43200 < th dose dependent rect. 8 6
602 45.93 radiation 20 4320 > th dose dependent rect. 7 1
603 45.93 radiation 10 14400 < th dose dependent rect. 18 2
617 45.94 radiation 30 4320 > th dose dependent rect. 15 18
618 45.95 wind 9 43200 > th dose independent rect. 19 21
628 45.95 radiation 10 14400 < th dose dependent rect. 18 7
645 45.96 temperature 30 4320 > th dose dependent rect. 17 2
722 46.03 wind 5 43200 > th dose independent rect. 6 1
754 46.06 radiation 1 4320 < th dose independent rect. 18 15
757 46.06 wind 9 43200 < th dose dependent sin 4 NA
779 46.08 wind 5 43200 < th dose independent rect. 6 1
812 46.12 radiation 1 720 > th dose independent rect. 18 1
956 46.22 wind 5 43200 < th dose independent rect. 15 23
961 46.23 wind 7 43200 < th dose independent rect. 10 1