BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0854100 Os03g0854100|AK067615
(412 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46750.1 | chr5:18969950-18971817 REVERSE LENGTH=403 403 e-112
AT4G17890.1 | chr4:9937121-9939146 FORWARD LENGTH=414 398 e-111
AT2G35210.1 | chr2:14836206-14837946 FORWARD LENGTH=396 345 2e-95
AT3G53710.1 | chr3:19903730-19905419 REVERSE LENGTH=460 137 1e-32
AT2G37550.1 | chr2:15755544-15757456 REVERSE LENGTH=457 135 4e-32
AT5G54310.1 | chr5:22057262-22061066 REVERSE LENGTH=484 101 6e-22
AT3G17660.1 | chr3:6037717-6039092 FORWARD LENGTH=233 98 9e-21
AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386 92 7e-19
AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337 89 5e-18
AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338 86 4e-17
AT1G60860.1 | chr1:22401244-22407639 REVERSE LENGTH=777 77 2e-14
AT1G10870.1 | chr1:3616905-3623612 REVERSE LENGTH=776 75 6e-14
AT5G13300.1 | chr5:4255923-4262018 REVERSE LENGTH=828 74 1e-13
AT5G61980.1 | chr5:24894472-24899178 FORWARD LENGTH=829 74 2e-13
AT4G32630.2 | chr4:15738315-15741412 FORWARD LENGTH=629 62 8e-10
AT1G08680.4 | chr1:2762820-2768387 FORWARD LENGTH=652 58 7e-09
AT4G13350.1 | chr4:7770170-7773321 REVERSE LENGTH=603 56 3e-08
>AT5G46750.1 | chr5:18969950-18971817 REVERSE LENGTH=403
Length = 402
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 278/419 (66%), Gaps = 24/419 (5%)
Query: 1 MAFDAFTDKNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHIT 60
MA + TDKN VFR+LK+K ENK+CFDCSAKNPTWASV YGIFLC+DCSAVHRSLGVHI+
Sbjct: 1 MATENLTDKNVVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHIS 60
Query: 61 FVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVDAKYTSRAAELYRQILQKE 120
FVRSTNLDSW+P+QL+ M FGGNNRA FFKQHGW DGGK++AKYTSRAA++YRQ L KE
Sbjct: 61 FVRSTNLDSWSPEQLRTMMFGGNNRAQVFFKQHGWNDGGKIEAKYTSRAADMYRQTLAKE 120
Query: 121 VAKSSA-DNVLPS-SPVAASQPQNPSDD-FPEFKLPEAPAENTNGKQEPDVTNSQKAPTQ 177
VAK+ A + VLPS S VA SQP S++ F E+P E ++ KQE V +S KA +
Sbjct: 121 VAKAMAEETVLPSLSSVATSQPVESSENGFTS----ESPKE-SSLKQEAAVVSSPKASQK 175
Query: 178 TPKAPTHPTFATXXXXXXXXXXXXXXXXXXXXXXXXXXPSESLYDQKPEEPKPAAPVM-- 235
+ + ++LY+QKPEEP P P
Sbjct: 176 VVASTFKKPLVSRKSGKTGGLGARKLTTKSK---------DNLYEQKPEEPVPVIPAASP 226
Query: 236 TTSTTKSGPSLHSRFEYVENEPAVDSRNGGTQMTGHVAPPKSSNFFQEYGMDNGFQXXXX 295
T T+ +G S SRFEY ++E + GT++ HVAPPKSSNFF E+GMD+ F
Sbjct: 227 TNDTSAAGSSFASRFEYFDDEQS--GGQSGTRVLSHVAPPKSSNFFNEFGMDSAFPKKSS 284
Query: 296 XXXXXXQIQETDEARKKFSNAKAISSSQFFGNQSRE-EKDAQMSLQKFAGSSSISSADLF 354
Q++ETDEARKKFSNAK+ISS+QFFGNQ+R+ + D++ +LQKF+GS++ISS+DLF
Sbjct: 285 SSSSKAQVEETDEARKKFSNAKSISSAQFFGNQNRDADLDSKATLQKFSGSAAISSSDLF 344
Query: 355 GRRXXXXXXXXXXXXXXINRISFQASQDLSSLKNMAGETGKKLTSIASNFISDL-DRIL 412
G INRISFQA QD+SS+ N+A ET KL + AS+ SDL DR+L
Sbjct: 345 G-HGPDDSNIDITASDLINRISFQAQQDMSSIANLAEETKNKLGTFASSIFSDLQDRML 402
>AT4G17890.1 | chr4:9937121-9939146 FORWARD LENGTH=414
Length = 413
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/423 (50%), Positives = 274/423 (64%), Gaps = 30/423 (7%)
Query: 4 DAFTDKNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVR 63
D TDKN VFR+LK+K ENK+CFDCSAKNPTWASVTYGIFLC+DCSA HR+LGVHI+FVR
Sbjct: 7 DNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVR 66
Query: 64 STNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVDAKYTSRAAELYRQILQKEVAK 123
STNLDSW+P+QL+ M FGGNNRA FFKQHGWTDGGK++AKYTSRAA+LYRQIL KEVAK
Sbjct: 67 STNLDSWSPEQLRTMMFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQILAKEVAK 126
Query: 124 SSADNV---LPSSPVAASQPQNPSDDFPEF----KLPEAPAENTNGKQEPDVTNSQKAPT 176
+ A+ L SSPVA SQ S+ + +LP + E T+ P +N T
Sbjct: 127 AIAEETNSGLLSSPVATSQLPEVSNGVSSYSVKEELPLSKHEATSATSSPKASN-----T 181
Query: 177 QTPKAPTHPTFATXXXXXXXXXXXXXXXXXXXXXXXXXXPSESLYDQKPEEPKPAAPVMT 236
P P A P ++LY+QKPEE P P ++
Sbjct: 182 VVPSTFKKPIGA----------KRTGKTGGLGARKLTTKPKDNLYEQKPEEVAPVIPAVS 231
Query: 237 T-----STTKSGPSLHSRFEYVENEPAVDSRNGGTQMTGHVAPPKSSNFFQEYGMDNGFQ 291
+ S + +G S SRFEY ++ + GGTQ+ HVAPPKSS+FF ++GMD+ F
Sbjct: 232 STNNGESKSSAGSSFASRFEYNDDLQSGGQSVGGTQVLNHVAPPKSSSFFSDFGMDSSFP 291
Query: 292 XXXXXXXXXXQIQETDEARKKFSNAKAISSSQFFGNQSRE-EKDAQMSLQKFAGSSSISS 350
Q++E+DEARKKF+NAK+ISS+Q+FG+Q++ + +++ +LQKFAGS+SISS
Sbjct: 292 KKSSSNSSKSQVEESDEARKKFTNAKSISSAQYFGDQNKNADLESKATLQKFAGSASISS 351
Query: 351 ADLFGRRXXXXXXXXXXXXXXINRISFQASQDLSSLKNMAGETGKKLTSIASNFISDL-D 409
AD +G INR+SFQA QDLSSL N+AGET KKL ++AS SD+ D
Sbjct: 352 ADFYG-HDQDDSNIDITASDLINRLSFQAQQDLSSLVNIAGETKKKLGTLASGIFSDIQD 410
Query: 410 RIL 412
R+L
Sbjct: 411 RML 413
>AT2G35210.1 | chr2:14836206-14837946 FORWARD LENGTH=396
Length = 395
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/414 (49%), Positives = 254/414 (61%), Gaps = 31/414 (7%)
Query: 1 MAFDAFTDKNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHIT 60
MA + DK +VF++LKAK +NK+CFDC+AKNPTWASVTYGIFLC+DCSAVHRSLGVHI+
Sbjct: 1 MASENLNDKISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
Query: 61 FVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVDAKYTSRAAELYRQILQKE 120
FVRSTNLDSW+ +QLKMM +GGNNRA FFKQ+GW+DGGK +AKYTSRAA+LY+QIL KE
Sbjct: 61 FVRSTNLDSWSSEQLKMMIYGGNNRAQVFFKQYGWSDGGKTEAKYTSRAADLYKQILAKE 120
Query: 121 VAKSSADNV--LPSSPVAASQPQNPSDDFPEFKLPEAPAENTNGKQE--PDVTNSQKAPT 176
VAKS A+ LP SP ++Q N K EA E+ KQ+ PDV +
Sbjct: 121 VAKSKAEEELDLPPSPPDSTQVPN---GLSSIKTSEALKESNTLKQQEKPDVVPVSPRIS 177
Query: 177 QTPKAPTHPTFATXXXXXXXXXXXXXXXXXXXXXXXXXXPSESLYDQKPEEP---KPAAP 233
++ K P S +LYDQKPEE + +P
Sbjct: 178 RSVKKPLG-------------AKKTGKTGGLGARKLTTKSSGTLYDQKPEESVIIQATSP 224
Query: 234 VMTTSTTKSGPSLHSRFEYVENEPAVDSRNGGTQMTGHVAPPKSSNFFQEYGMDNG--FQ 291
V S S S + V+N S Q+ HVAPPKSS FF+E NG FQ
Sbjct: 225 VSAKSARSSFSSRFDYADNVQNREDYMS----PQVVSHVAPPKSSGFFEEELEMNGGRFQ 280
Query: 292 XXXXXXXXXXQIQETDEARKKFSNAKAISSSQFFGNQSRE-EKDAQMSLQKFAGSSSISS 350
QIQETDEARKKF+NAK+ISS+Q+FGN + + +A+ SL+KF+GSS+ISS
Sbjct: 281 KKPITSSSKLQIQETDEARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISS 340
Query: 351 ADLFGRRXXXXXXXXXXXXXXINRISFQASQDLSSLKNMAGETGKKLTSIASNF 404
ADLFG +NR+S QA QD+SSLKNMA ET KKL S+AS+
Sbjct: 341 ADLFG-DGDGDFPLDLTAGDLLNRLSLQAQQDISSLKNMAEETKKKLGSVASSL 393
>AT3G53710.1 | chr3:19903730-19905419 REVERSE LENGTH=460
Length = 459
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 75/106 (70%)
Query: 13 FRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTP 72
R L+++PENK+C DC+ KNP WASV+YGIF+CL+CS HR LGVHI+FVRS +DSW+
Sbjct: 7 LRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSA 66
Query: 73 DQLKMMAFGGNNRAHAFFKQHGWTDGGKVDAKYTSRAAELYRQILQ 118
Q+K M GGN R + FF Q+G + +KY S AA +YR +Q
Sbjct: 67 IQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYRDRIQ 112
>AT2G37550.1 | chr2:15755544-15757456 REVERSE LENGTH=457
Length = 456
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%)
Query: 13 FRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTP 72
R L+++PENK+C DCS KNP WAS++YGIF+CL+CS HR LGVHI+FVRS +DSW+
Sbjct: 7 LRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSE 66
Query: 73 DQLKMMAFGGNNRAHAFFKQHGWTDGGKVDAKYTSRAAELYRQILQ 118
Q+K M GGN R + F Q+G + + +KY S AA +YR +Q
Sbjct: 67 IQIKKMDAGGNERLNNFLAQYGISKETDIISKYNSNAASVYRDRIQ 112
>AT5G54310.1 | chr5:22057262-22061066 REVERSE LENGTH=484
Length = 483
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 55/80 (68%)
Query: 12 VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWT 71
+ L PEN+ C DC K P WASV GIF+C+ CS +HRSLGVHI+ VRS LD+W
Sbjct: 18 ILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWL 77
Query: 72 PDQLKMMAFGGNNRAHAFFK 91
P+Q+ + GN++A+++++
Sbjct: 78 PEQVAFIQSMGNDKANSYWE 97
>AT3G17660.1 | chr3:6037717-6039092 FORWARD LENGTH=233
Length = 232
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 12 VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWT 71
+ L P+N+ C DC +K P WASV GIF+C+ CS +HRSLGVHI+ VRS LD+W
Sbjct: 18 ILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSITLDTWL 77
Query: 72 PDQLKMMAFGGNNRAHAFFK 91
PDQ+ M GN + + +++
Sbjct: 78 PDQVAFMKSTGNAKGNEYWE 97
>AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386
Length = 385
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 13 FRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTP 72
+L +P NK C DC + P W S++ G+F+C+ CS VHRSLGVHI+ V S LD WT
Sbjct: 50 LEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTD 109
Query: 73 DQLKMMA-FGGNNRAHAFFK 91
DQ+ M+ +GGN + F+
Sbjct: 110 DQVDMLVGYGGNTAVNERFE 129
>AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337
Length = 336
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 13 FRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTP 72
R L +P+N++C DC A +P WAS G+F+CL C VHRSLG HI+ V S LD W+
Sbjct: 18 IRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSD 77
Query: 73 DQL-KMMAFGGNNRAHAFFK 91
+++ M+ GGN A++ ++
Sbjct: 78 EEVDSMIEIGGNASANSIYE 97
>AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338
Length = 337
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 13 FRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTP 72
R L + +N++C DC A +P WAS G+F+CL C VHRSLG HI+ V S LD W+
Sbjct: 18 IRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSD 77
Query: 73 DQL-KMMAFGGNNRAHAFFK 91
+++ M+ GGN A++ ++
Sbjct: 78 EEVDSMIEIGGNASANSIYE 97
>AT1G60860.1 | chr1:22401244-22407639 REVERSE LENGTH=777
Length = 776
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 12 VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLD--S 69
V L+ P N C +C+A +P WAS+ G+ +C++CS VHR+LGVHI+ VRS LD
Sbjct: 469 VLTILREIPGNNTCAECNAPDPDWASLNLGVLMCIECSGVHRNLGVHISKVRSLTLDVKV 528
Query: 70 WTPDQLKMMAFGGNNRAHAFFKQ 92
W P L + GN ++ +++
Sbjct: 529 WEPTILDLFRNLGNGYCNSVWEE 551
>AT1G10870.1 | chr1:3616905-3623612 REVERSE LENGTH=776
Length = 775
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 16 LKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLD--SWTPD 73
L+ P N C +C+A P WAS+ G+ LC+ CS VHR+LGVHI+ VRS +LD W P
Sbjct: 473 LRGLPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPT 532
Query: 74 QLKMMAFGGNNRAHAFFK 91
L + GN ++ ++
Sbjct: 533 ILDLFRNLGNVYCNSLWE 550
>AT5G13300.1 | chr5:4255923-4262018 REVERSE LENGTH=828
Length = 827
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 16 LKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLD--SWTPD 73
L+ N C DC A P WAS+ G+ +C++CS VHR+LGVHI+ VRS LD W P
Sbjct: 507 LRKVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPS 566
Query: 74 QLKMMAFGGNNRAHAFFKQ 92
+ + GN A+ +++
Sbjct: 567 VISLFQALGNTFANTVWEE 585
>AT5G61980.1 | chr5:24894472-24899178 FORWARD LENGTH=829
Length = 828
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 22 NKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLD--SWTPDQLKMMA 79
N+ C DC A P WAS+ G+ +C++CS +HR+LGVHI+ VRS LD W P L +
Sbjct: 510 NERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISKVRSLTLDVKVWEPSVLTLFQ 569
Query: 80 FGGNNRAHAFFKQ 92
GN ++ +++
Sbjct: 570 SLGNVYVNSVWEE 582
>AT4G32630.2 | chr4:15738315-15741412 FORWARD LENGTH=629
Length = 628
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 1 MAFDAFTDKNAVFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHIT 60
M D T+K R L PEN+ C +C++ P + T+ F+C++CS +HR
Sbjct: 1 MKEDERTEK--AIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREF---TH 55
Query: 61 FVRSTNLDSWTPDQLKMMAFGGNNRA-HAFFKQ 92
V+S ++ +T D++ + GGN RA +FK+
Sbjct: 56 RVKSVSMAKFTADEVSALRAGGNERARQIYFKE 88
>AT1G08680.4 | chr1:2762820-2768387 FORWARD LENGTH=652
Length = 651
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 12 VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWT 71
+ R L P N+ C +C++ P + T+ F+C+ CS +HR V+S ++ +T
Sbjct: 14 IIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREF---THRVKSVSMSKFT 70
Query: 72 PDQLKMMAFGGNNRAHAFF 90
+++++ GGN RA +
Sbjct: 71 SKEVEVLQNGGNQRAREIY 89
>AT4G13350.1 | chr4:7770170-7773321 REVERSE LENGTH=603
Length = 602
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 12 VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWT 71
+ R L PENK C +C++ P + T+ F+C +CS +HR V+S ++ +T
Sbjct: 14 IIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREF---THRVKSISMAKFT 70
Query: 72 PDQLKMMAFGGNNRAH-AFFKQHGWTDGGKVDAKYTSRAAELYRQI 116
++ + GGN A +FK D R + R +
Sbjct: 71 SQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHV 116
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.126 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,173,010
Number of extensions: 317542
Number of successful extensions: 877
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 862
Number of HSP's successfully gapped: 19
Length of query: 412
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 311
Effective length of database: 8,337,553
Effective search space: 2592978983
Effective search space used: 2592978983
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)