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Os03g0278400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ADP ribosylation GTPase-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0172) R2 : 0.000786
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0217 (0.0362) R2dN8 : 0.00102 R2N8 : 0.000786
σ : 0.324
deviance : 48.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.33 0.267 10.5 0.784 1.18 1.55 0.392 0.3 0.111 18.2 1.054 814 -- --
32.34 0.265 10.5 0.787 1.17 1.53 0.176 -- 0.115 18.2 1.122 811 -- --
32.35 0.265 10.5 0.787 1.12 1.45 -- -0.238 0.113 18.2 1.376 810 -- --
32.42 0.265 10.5 0.786 1.12 1.47 -- -- 0.112 18.2 1.171 813 -- --
36.04 0.28 10.5 0.723 -- -0.173 -- 0.252 0.0536 -- 30.2 47520 -- --
36.31 0.282 10.5 0.659 0.0893 -- -0.0619 -- 0.0536 15.2 -- -- -- --
36.32 0.282 10.5 0.658 0.0894 -- -- -- 0.0532 15.4 -- -- -- --
36.05 0.28 10.5 0.729 -- -0.189 -- -- 0.0583 -- 84.21 47520 -- --
46.16 0.316 10.5 -- 0.505 0.616 -- -- 0.00841 18 9.894 808 -- --
36.77 0.283 10.5 0.654 -- -- -- -- 0.0509 -- -- -- -- --
47.72 0.323 10.5 -- 0.0764 -- -- -- -0.02 15.4 -- -- -- --
47.65 0.321 10.5 -- -- 0.128 -- -- -0.021 -- 91.12 47520 -- --
48.05 0.324 10.5 -- -- -- -- -- -0.0217 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.13 radiation 1.0 1440 > th dose independent rect. 11 1
2 31.00 wind 5.0 90 < th dose independent rect. 17 18
3 31.13 temperature 20.0 90 > th dose independent rect. 23 8
4 31.18 temperature 20.0 10 > th dose independent rect. 12 19
5 31.20 radiation 1.0 1440 > th dose independent rect. 9 3
6 31.31 temperature 20.0 10 > th dose independent rect. 23 8
10 31.41 temperature 20.0 90 > th dose dependent rect. 8 3
11 31.45 temperature 20.0 10 > th dose independent rect. 20 11
12 31.48 temperature 15.0 270 > th dose dependent rect. 6 4
18 31.52 radiation 1.0 1440 < th dose dependent rect. 9 9
20 31.53 radiation 1.0 1440 < th dose dependent rect. 11 7
65 31.89 radiation 1.0 270 > th dose independent rect. 17 18
73 31.98 temperature 25.0 90 > th dose independent rect. 8 3
78 31.99 radiation 1.0 1440 < th dose independent rect. 11 7
99 32.05 temperature 25.0 90 > th dose dependent rect. 21 14
101 32.06 temperature 25.0 90 > th dose dependent rect. 3 8
102 32.06 temperature 25.0 90 > th dose dependent rect. 1 10
103 32.07 wind 7.0 90 < th dose dependent rect. 9 2
108 32.07 temperature 25.0 90 > th dose dependent rect. 18 17
117 32.11 wind 5.0 90 < th dose independent rect. 9 2
119 32.11 radiation 1.0 1440 < th dose independent rect. 11 11
126 32.12 radiation 1.0 1440 < th dose independent rect. 11 17
128 32.13 radiation 1.0 1440 < th dose independent rect. 11 15
129 32.13 wind 5.0 90 < th dose independent rect. 8 16
133 32.14 radiation 1.0 720 < th dose dependent rect. 5 18
182 32.18 radiation 1.0 1440 < th dose dependent rect. 9 19
183 32.19 atmosphere 1010.0 90 < th dose independent rect. 9 2
190 32.19 temperature 15.0 10 > th dose dependent rect. 7 5
199 32.19 radiation 1.0 1440 < th dose dependent rect. 11 17
214 32.20 radiation 1.0 720 < th dose dependent rect. 19 23
222 32.22 humidity 50.0 720 > th dose dependent rect. 19 2
230 32.23 radiation 1.0 1440 > th dose independent rect. 11 7
260 32.26 temperature 15.0 90 > th dose independent rect. 9 2
274 32.28 radiation 1.0 1440 < th dose independent sin 19 NA
275 32.28 humidity 90.0 90 < th dose independent rect. 9 2
305 32.32 radiation 1.0 1440 < th dose dependent sin 19 NA
311 32.33 radiation 30.0 4320 < th dose dependent rect. 19 10
316 32.34 temperature 20.0 10 > th dose independent rect. 12 16
366 32.37 humidity 90.0 90 < th dose dependent rect. 8 3
389 32.42 radiation 1.0 270 > th dose independent rect. 7 2
390 32.42 humidity 90.0 270 < th dose independent rect. 6 4
396 32.42 wind 7.0 10 < th dose independent rect. 8 16
437 32.47 radiation 1.0 1440 > th dose independent sin 18 NA
439 32.47 radiation 1.0 270 > th dose independent rect. 6 4
462 32.49 radiation 1.0 270 > th dose independent rect. 4 7
475 32.50 wind 5.0 270 < th dose independent rect. 6 5
491 32.51 radiation 1.0 720 < th dose dependent rect. 4 14
505 32.53 humidity 60.0 90 > th dose independent rect. 9 2
512 32.53 wind 9.0 270 < th dose dependent rect. 6 5
515 32.53 humidity 90.0 90 < th dose dependent rect. 21 14
516 32.53 wind 9.0 270 < th dose dependent rect. 16 19
520 32.54 radiation 1.0 720 < th dose independent rect. 5 18
524 32.55 radiation 1.0 90 > th dose independent rect. 9 2
543 32.57 precipitation 0.1 90 < th dose independent rect. 9 2
545 32.57 temperature 15.0 270 > th dose independent rect. 6 5
549 32.57 precipitation 0.1 90 < th dose dependent rect. 9 2
560 32.58 precipitation 0.1 270 < th dose independent rect. 15 20
563 32.58 humidity 90.0 90 < th dose dependent rect. 18 17
565 32.58 precipitation 0.1 270 < th dose dependent rect. 15 20
567 32.59 atmosphere 995.0 90 > th dose independent rect. 9 2
576 32.59 temperature 10.0 90 > th dose independent rect. 11 22
592 32.61 radiation 1.0 270 > th dose independent rect. 15 22
615 32.63 humidity 90.0 90 < th dose dependent rect. 3 8
654 32.66 wind 5.0 90 < th dose independent rect. 7 22
664 32.67 radiation 30.0 14400 < th dose independent rect. 17 8
669 32.67 precipitation 0.1 720 < th dose independent rect. 21 22
670 32.67 precipitation 0.1 270 < th dose independent rect. 14 23
677 32.67 precipitation 0.1 720 < th dose dependent rect. 21 22
678 32.67 precipitation 0.1 270 < th dose dependent rect. 14 23
679 32.68 radiation 1.0 1440 < th dose independent rect. 9 3
683 32.68 precipitation 0.1 90 < th dose independent rect. 17 18
688 32.68 radiation 1.0 1440 < th dose dependent rect. 9 3
698 32.68 precipitation 0.1 90 < th dose dependent rect. 17 18
729 32.71 precipitation 0.1 270 < th dose independent rect. 6 15
736 32.71 precipitation 0.1 270 < th dose dependent rect. 6 15
740 32.72 radiation 1.0 1440 < th dose independent rect. 8 5
747 32.72 precipitation 0.1 720 < th dose independent rect. 16 17
751 32.72 radiation 1.0 1440 < th dose dependent rect. 8 5
753 32.72 precipitation 0.1 720 < th dose dependent rect. 16 17
756 32.73 wind 1.0 90 > th dose independent rect. 9 2
763 32.73 radiation 20.0 10 > th dose dependent rect. 10 1
786 32.75 radiation 40.0 270 < th dose independent rect. 7 2
818 32.76 humidity 90.0 270 < th dose independent rect. 3 8
819 32.76 humidity 80.0 90 < th dose independent rect. 1 10
866 32.79 temperature 10.0 270 > th dose dependent rect. 21 9
875 32.80 radiation 20.0 30 > th dose independent rect. 8 3
881 32.80 radiation 10.0 1440 < th dose independent rect. 19 10
887 32.80 atmosphere 1015.0 90 < th dose independent rect. 11 22
901 32.81 humidity 80.0 30 < th dose independent rect. 18 18
908 32.81 humidity 90.0 720 > th dose dependent rect. 20 1
934 32.82 radiation 1.0 720 < th dose dependent rect. 4 23
935 32.83 radiation 1.0 1440 < th dose independent rect. 11 1
943 32.83 radiation 1.0 1440 < th dose dependent rect. 11 1
965 32.84 atmosphere 1010.0 270 < th dose independent rect. 21 9
979 32.84 humidity 50.0 270 > th dose dependent rect. 20 10
985 32.85 radiation 10.0 270 > th dose independent sin 11 NA