Os05g0382000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABL164Cp.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0382000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to ABL164Cp.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.06 | 0.708 | 3.87 | -1.87 | 3.01 | -1.38 | -4.25 | 1.77 | -0.303 | 6.23 | 20.41 | 291 | 20.9 | 14.4 |
| 235.4 | 0.715 | 3.89 | -2.04 | 3.05 | -1.46 | -3.18 | -- | -0.317 | 6.11 | 20.4 | 300 | 20.5 | 14.7 |
| 260.16 | 0.751 | 3.88 | -2.16 | 3.05 | -1.46 | -- | 0.103 | -0.326 | 6.14 | 20.55 | 308 | 20.3 | 14.8 |
| 259.49 | 0.75 | 3.88 | -2.15 | 3.05 | -1.47 | -- | -- | -0.33 | 6.23 | 20.41 | 309 | 20.5 | 14.7 |
| 378.48 | 0.906 | 3.99 | -2.82 | -- | -1.05 | -- | 0.972 | -0.583 | -- | 14.2 | 1317 | 21.5 | 15.4 |
| 293.94 | 0.804 | 3.97 | -2.43 | 1.75 | -- | -3.32 | -- | -0.535 | 5.71 | -- | -- | -- | -- |
| 321.03 | 0.839 | 3.96 | -2.45 | 1.73 | -- | -- | -- | -0.521 | 5.76 | -- | -- | -- | -- |
| 300.47 | 0.807 | 4.02 | -2.48 | -- | 1.75 | -- | -- | -0.566 | -- | -26.7 | 386 | 23 | 7.78 |
| 368.69 | 0.894 | 3.87 | -- | 3.36 | -1.8 | -- | -- | -0.173 | 5.76 | 19.2 | 378 | 18.9 | 15.4 |
| 476.79 | 1.02 | 3.99 | -2.4 | -- | -- | -- | -- | -0.48 | -- | -- | -- | -- | -- |
| 479.57 | 1.02 | 3.9 | -- | 1.69 | -- | -- | -- | -0.248 | 5.83 | -- | -- | -- | -- |
| 463.26 | 1 | 3.95 | -- | -- | 1.72 | -- | -- | -0.31 | -- | -22.3 | 417 | 22.9 | 7.58 |
| 628.55 | 1.17 | 3.93 | -- | -- | -- | -- | -- | -0.214 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 22 | 244.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 27 | 245.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 38 | 248.17 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 52 | 249.65 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 55 | 249.94 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 60 | 250.11 | temperature | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 64 | 250.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 70 | 250.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 73 | 250.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 74 | 250.84 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 89 | 251.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 90 | 251.26 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 91 | 251.26 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 95 | 251.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 96 | 251.37 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 108 | 251.49 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 115 | 251.54 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 146 | 252.06 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 20 |
| 160 | 252.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 166 | 252.38 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 170 | 252.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 175 | 252.47 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 228 | 253.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 250 | 253.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 259 | 253.51 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 262 | 253.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 285 | 253.86 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 2 |
| 294 | 254.00 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 302 | 254.10 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 320 | 254.36 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 326 | 254.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 24 | 2 |
| 349 | 254.71 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 363 | 254.86 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 368 | 254.90 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 371 | 254.94 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 376 | 254.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 416 | 255.18 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 418 | 255.18 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 17 |
| 424 | 255.20 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 444 | 255.36 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 459 | 255.51 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 473 | 255.62 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 503 | 255.85 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 504 | 255.89 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 546 | 256.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 575 | 256.40 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 580 | 256.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 625 | 256.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 631 | 256.86 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 641 | 256.93 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 687 | 257.28 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 736 | 257.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 756 | 257.69 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 759 | 257.72 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 763 | 257.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 778 | 257.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 9 |
| 800 | 257.92 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 839 | 258.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 855 | 258.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 857 | 258.17 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 867 | 258.21 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 13 |
| 900 | 258.36 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 923 | 258.53 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 22 | 4 |
| 928 | 258.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 959 | 258.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 973 | 258.77 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |