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Os02g0632500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Arf GTPase activating protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0168) R2 : 0.421
β1 : 0.818 (0.0614) R2dD : 0.234 R2D : 0.0523
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.527 (0.0358) R2dN8 : 0.369 R2N8 : 0.187
σ : 0.315
deviance : 45.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.87 0.269 10.2 0.631 0.262 -0.228 -0.618 -2.14 0.478 3.02 26.01 99 -- --
33.47 0.272 10.2 0.853 0.256 -0.487 -0.392 -- 0.519 3.48 27.13 68 -- --
33.7 0.272 10.2 0.761 0.277 -0.351 -- -1.29 0.5 3.56 27.52 91 -- --
33.92 0.273 10.2 0.856 0.263 -0.462 -- -- 0.521 3.69 27.13 68 -- --
36.3 0.282 10.2 0.845 -- -0.596 -- -0.559 0.537 -- 25.9 51 -- --
36.62 0.284 10.2 0.797 0.39 -- -0.244 -- 0.515 3.36 -- -- -- --
36.81 0.284 10.2 0.801 0.39 -- -- -- 0.517 3.43 -- -- -- --
36.25 0.282 10.2 0.905 -- -0.602 -- -- 0.592 -- 24.1 76 -- --
52.55 0.339 10.2 -- 0.344 -0.333 -- -- 0.42 3.48 28.73 71 -- --
45.35 0.315 10.2 0.818 -- -- -- -- 0.527 -- -- -- -- --
53.73 0.343 10.2 -- 0.406 -- -- -- 0.427 3.42 -- -- -- --
57.31 0.354 10.2 -- -- -0.507 -- -- 0.449 -- 25.7 8 -- --
62.98 0.37 10.2 -- -- -- -- -- 0.436 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.95 temperature 30 270 < th dose independent rect. 1 18
2 30.98 temperature 15 30 > th dose independent rect. 5 23
5 31.12 temperature 30 720 < th dose independent rect. 6 8
7 31.25 temperature 30 720 > th dose independent rect. 8 6
23 31.31 atmosphere 1005 30 > th dose dependent rect. 14 9
40 31.80 temperature 25 720 > th dose dependent rect. 24 13
41 31.81 temperature 30 90 < th dose independent rect. 3 20
45 31.84 temperature 25 720 > th dose dependent sin 6 NA
50 31.86 temperature 25 720 > th dose dependent rect. 5 8
57 31.90 temperature 25 720 > th dose dependent rect. 6 5
63 31.94 temperature 15 1440 > th dose independent rect. 4 20
66 31.95 temperature 30 720 > th dose independent sin 7 NA
72 31.96 temperature 15 90 > th dose dependent rect. 7 20
86 32.01 temperature 25 270 < th dose independent rect. 24 9
88 32.04 temperature 30 10 < th dose independent rect. 5 18
98 32.09 temperature 30 270 < th dose independent rect. 11 8
109 32.11 temperature 10 10 > th dose dependent rect. 6 23
131 32.15 temperature 25 270 > th dose dependent rect. 16 21
139 32.18 temperature 20 720 < th dose dependent rect. 17 5
158 32.22 temperature 20 720 < th dose dependent rect. 20 1
205 32.32 temperature 15 10 > th dose dependent rect. 8 20
212 32.35 humidity 60 270 > th dose independent rect. 12 7
216 32.36 temperature 30 270 > th dose independent rect. 16 22
252 32.43 temperature 30 720 < th dose independent sin 4 NA
263 32.44 temperature 25 30 < th dose independent rect. 4 6
283 32.47 atmosphere 1005 270 > th dose dependent rect. 13 6
300 32.50 humidity 90 30 > th dose dependent rect. 4 14
304 32.51 temperature 20 1440 < th dose dependent rect. 16 1
308 32.52 humidity 90 90 > th dose dependent rect. 3 18
326 32.56 temperature 25 30 < th dose independent rect. 4 4
340 32.56 humidity 60 270 > th dose independent rect. 13 17
341 32.56 humidity 90 1440 > th dose dependent rect. 15 2
342 32.56 humidity 90 1440 > th dose dependent rect. 13 5
350 32.57 temperature 30 270 < th dose independent rect. 11 22
366 32.58 humidity 90 30 > th dose dependent rect. 4 8
376 32.60 humidity 90 90 > th dose dependent rect. 4 1
424 32.66 humidity 90 10 > th dose independent rect. 4 2
460 32.70 temperature 30 270 < th dose independent rect. 14 16
462 32.70 atmosphere 995 10 > th dose dependent rect. 5 18
466 32.71 temperature 30 30 < th dose independent rect. 14 9
469 32.71 humidity 90 30 > th dose dependent rect. 4 6
477 32.72 temperature 15 1440 > th dose independent sin 0 NA
480 32.72 humidity 90 30 > th dose dependent rect. 4 4
506 32.75 temperature 15 1440 > th dose independent rect. 15 9
514 32.76 humidity 90 10 > th dose independent rect. 4 8
526 32.76 temperature 15 4320 < th dose dependent rect. 2 17
531 32.77 wind 1 90 < th dose dependent rect. 4 3
539 32.78 wind 1 90 < th dose independent rect. 4 3
540 32.78 temperature 15 720 > th dose independent rect. 11 10
549 32.79 atmosphere 1010 720 < th dose independent rect. 18 5
592 32.82 humidity 90 270 > th dose dependent rect. 1 20
597 32.83 temperature 30 10 < th dose dependent rect. 4 19
623 32.84 humidity 60 10 > th dose dependent rect. 5 18
637 32.86 humidity 90 10 > th dose independent rect. 4 14
669 32.88 humidity 90 90 > th dose dependent sin 2 NA
682 32.89 humidity 90 1440 > th dose independent rect. 12 6
701 32.90 temperature 15 1440 > th dose independent rect. 12 13
739 32.92 radiation 1 1440 > th dose independent rect. 11 3
741 32.92 temperature 15 720 > th dose independent rect. 18 7
746 32.92 temperature 20 720 < th dose dependent sin 18 NA
768 32.94 temperature 15 4320 < th dose dependent sin 3 NA
792 32.95 temperature 15 4320 < th dose dependent rect. 2 13
800 32.96 wind 7 1440 < th dose independent rect. 5 1
802 32.96 temperature 10 1440 > th dose independent rect. 5 1
805 32.96 temperature 30 1440 < th dose independent rect. 5 1
809 32.96 humidity 50 1440 > th dose independent rect. 5 1
818 32.96 atmosphere 995 1440 > th dose independent rect. 5 1
819 32.96 atmosphere 1015 1440 < th dose independent rect. 5 1
820 32.96 radiation 20 1440 < th dose independent rect. 5 1
829 32.96 humidity 90 1440 > th dose independent rect. 15 2
834 32.96 temperature 10 1440 > th dose independent rect. 6 23
845 32.97 temperature 15 720 > th dose independent rect. 13 8
847 32.97 atmosphere 1005 30 > th dose independent rect. 14 9
849 32.97 temperature 15 10 > th dose independent rect. 23 23
861 32.98 temperature 25 270 > th dose dependent sin 10 NA
881 32.99 humidity 90 270 > th dose dependent rect. 1 14
898 33.00 temperature 15 4320 < th dose dependent rect. 2 9
910 33.01 temperature 15 1440 > th dose independent rect. 4 7
919 33.01 temperature 15 4320 < th dose dependent rect. 4 1
922 33.01 humidity 90 270 > th dose dependent rect. 1 11
926 33.02 temperature 15 1440 > th dose independent rect. 4 12
928 33.02 temperature 15 1440 > th dose independent rect. 8 16
929 33.02 atmosphere 1000 10 > th dose independent rect. 5 18
930 33.02 temperature 15 30 > th dose independent rect. 15 23
937 33.02 humidity 90 270 > th dose dependent rect. 1 8
952 33.03 temperature 15 4320 < th dose dependent rect. 4 6
961 33.04 temperature 15 720 > th dose independent rect. 18 5
976 33.05 temperature 15 4320 < th dose dependent rect. 2 4
981 33.05 temperature 20 270 < th dose dependent rect. 18 13
987 33.06 temperature 25 30 < th dose independent rect. 4 2
988 33.06 wind 1 30 > th dose independent rect. 23 6