BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0505400 Os09g0505400|Os09g0505400
(398 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0505400 Auxin Efflux Carrier family protein 554 e-158
Os08g0529000 Similar to Auxin efflux carrier component 1 (P... 307 8e-84
Os01g0919800 Similar to Efflux carrier of polar auxin trans... 255 3e-68
Os01g0715600 Similar to Auxin efflux carrier component 2 (A... 159 3e-39
Os11g0122800 136 3e-32
Os12g0133800 Similar to Auxin efflux carrier protein 129 4e-30
Os01g0802700 Auxin Efflux Carrier family protein 100 2e-21
Os06g0660200 Similar to Auxin efflux carrier protein 100 2e-21
Os01g0643300 Similar to Auxin efflux carrier protein 99 5e-21
Os02g0743400 Auxin transport protein REH1 97 3e-20
Os06g0232300 Similar to Auxin transport protein REH1 96 3e-20
Os11g0137000 Similar to PIN1-like auxin transport protein 94 2e-19
>Os09g0505400 Auxin Efflux Carrier family protein
Length = 398
Score = 554 bits (1427), Expect = e-158, Method: Compositional matrix adjust.
Identities = 290/398 (72%), Positives = 290/398 (72%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLV RIDPFALSYRV
Sbjct: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVACFAVPFFAFDFAARIDPFALSYRVLA 60
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
STRCC FSWCITGFSLATLNNTLVVGVPL
Sbjct: 61 ADALSKLAVALALAACAAAASTRCCGSGGGKRGGGGGFSWCITGFSLATLNNTLVVGVPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRXXXXXXXXXXXXXXXXXXXXXXXX 180
LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRR
Sbjct: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRATTAAAAPPPPPTGTDDDDVEDGA 180
Query: 181 XXXXXXXXXRRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLI 240
RRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLI
Sbjct: 181 AAAATAAAARRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLI 240
Query: 241 MSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXXXXXX 300
MSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALR
Sbjct: 241 MSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRFVAGPAATAVGAFALGLRGDLL 300
Query: 301 XXXXXQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFV 360
QAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFV
Sbjct: 301 RLAIIQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFV 360
Query: 361 FAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGFIR 398
FAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGFIR
Sbjct: 361 FAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGFIR 398
>Os08g0529000 Similar to Auxin efflux carrier component 1 (PIN-FORMED protein)
(AtPIN1)
Length = 370
Score = 307 bits (787), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/407 (44%), Positives = 216/407 (53%), Gaps = 60/407 (14%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
MAPLYFALGLGYGSVRWWR FTA+QC A+N +V R DPFA++YRV
Sbjct: 14 MAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVVRTDPFAMNYRVIA 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
TRC SW ITGFSLA LNNTLVVGVPL
Sbjct: 74 ADAVSKAIAIAAMAAWA---RTRCGCAAAKAGAQ----SWSITGFSLAALNNTLVVGVPL 126
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRX----------XXXXXXXXXXXXX 170
LDAMYG+WA+DL+VQI+VVQ++V+FPLLL+AFE+R+
Sbjct: 127 LDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKAWVVGGGGGVGPAVMSSSSPPEKQ 186
Query: 171 XXXXXXXXXXXXXXXXXXXRRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVET 230
R W R V LK+ARNPNVYA VLGV WAC+ RWH+
Sbjct: 187 SDVEMNGAVVAAPGGGGGVRLPFWATARTVGLKLARNPNVYASVLGVVWACIAYRWHLSL 246
Query: 231 PSIIEGSVLIMSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXX 290
P I+ GS+ +MS+TG G+SMFSMGLFM Q+++I CGAGLT LGMALR
Sbjct: 247 PGIVTGSLQVMSRTGTGMSMFSMGLFMGQQERVIACGAGLTALGMALR------------ 294
Query: 291 XXXXXXXXXXXXXXXQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQA 350
F+ P L + A + A
Sbjct: 295 ------------------------------FVAGPLATLVGAAALGLRGDVLHLAIIQAA 324
Query: 351 ALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGFI 397
LPQSI +FVFAKEYGLHA++LSTAVIFGTL SLP+LI YY VLGF+
Sbjct: 325 -LPQSIASFVFAKEYGLHADVLSTAVIFGTLISLPILIAYYAVLGFV 370
>Os01g0919800 Similar to Efflux carrier of polar auxin transport
Length = 363
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 195/406 (48%), Gaps = 68/406 (16%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLYFAL LGYGSVRWWR+FT +QCDAVNRLV DPF ++YR
Sbjct: 16 PLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTLHTDPFQVNYRAVAAD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
S C SW IT FSL+TL N+LVVGVP+
Sbjct: 76 VISKAVIVAVIGAWARFMSKGGCAV-----------SWSITSFSLSTLTNSLVVGVPMAR 124
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRXXXXXXX------XXXXXXXXXXXXX 176
AMYG+WA+ L+VQ+SV Q IV+ LLL EVR+
Sbjct: 125 AMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKAAIGMYVDGAEAAAAAGKDVEAAGAA 184
Query: 177 XXXXXXXXXXXXXRRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEG 236
+ SLW LV+ V K+ARNPN YA +G+ WAC+ NR H+ PS EG
Sbjct: 185 AAAGTVVVAAAAGKPSLWALVKVVAHKLARNPNTYASFVGITWACLANRLHIALPSAFEG 244
Query: 237 SVLIMSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXX 296
SVLIMSK+G G++MFSMGLFMA Q+KII CG LG+ L+
Sbjct: 245 SVLIMSKSGTGMAMFSMGLFMAQQEKIIACGTSFAALGLVLKFAL--------------- 289
Query: 297 XXXXXXXXXQAYTHLHEIHSPSSFFLLSPEICLNSN----GCMHDTSPHDETARDEQAAL 352
P++ + S + L + + P T
Sbjct: 290 -------------------GPAAMAIGSIAVGLRGDVLRVAIIQAALPQSIT-------- 322
Query: 353 PQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGFIR 398
+F+FAKEYGLHA++LSTAVIFG L SLP+L+ +YIVL IR
Sbjct: 323 -----SFIFAKEYGLHADVLSTAVIFGMLVSLPLLVGFYIVLELIR 363
>Os01g0715600 Similar to Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux
carrier AGR) (Polar-auxin-transport efflux component
AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1)
(AtEIR1) (WAVY6)
Length = 311
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 163/392 (41%), Gaps = 102/392 (26%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY A+ L Y S++WW+LFT +QC +N+ V DP+ ++ ++
Sbjct: 16 PLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVISTTDPYDMNIKLIYSD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
S CC F W ITGFSL+TL NTL+VG+PLL
Sbjct: 76 ILQKSLALLGFAAI----SKACCAEK---------FDWLITGFSLSTLPNTLIVGIPLLK 122
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRXXXXXXXXXXXXXXXXXXXXXXXXXX 182
MYG+ A L+ QI V+Q+++++ LLL FE+R
Sbjct: 123 GMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGL----------- 171
Query: 183 XXXXXXXRRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMS 242
+W LV W H+ P I+ S+ ++S
Sbjct: 172 ----------IWALVGFRW-------------------------HIRLPLIVSNSIRMLS 196
Query: 243 KTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXXXXXXXX 302
G+G++MFS+GLF ALQ KII CGA +L +A+R
Sbjct: 197 DGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIR------------------------ 232
Query: 303 XXXQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFVFA 362
F L P + S+ + + A QAALPQ I FVFA
Sbjct: 233 ------------------FFLGPALMGMSSYAIGMRGVLLKIA-IVQAALPQGIVPFVFA 273
Query: 363 KEYGLHAEILSTAVIFGTLASLPVLIVYYIVL 394
KEY + A+ILSTA+I G + ++PV + YY +
Sbjct: 274 KEYNVQADILSTAIIVGMMVAVPVALAYYFAM 305
>Os11g0122800
Length = 603
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 1 MAPLYFALGLGY-GSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVX 59
+APLYFAL LGY S RWWR+FTA+ +A+ +V +DP+ + Y +
Sbjct: 25 IAPLYFALVLGYCSSKRWWRIFTAEDSEAI--MVAWFALPFFTFEFTLHLDPYNVRYSLI 82
Query: 60 XXXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVP 119
+ WCI+GFSLA+L N+LVVGVP
Sbjct: 83 AADSISKLIIVIVIGIGVGLIFRK-------EGLCTAVIDWCISGFSLASLTNSLVVGVP 135
Query: 120 LLDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRXXXXXXXXXXXXXXXXXXXXXXX 179
+ AMYG WA ++VQ+S+ Q IV+ L++ EVR+
Sbjct: 136 MARAMYGNWAGQVVVQLSIFQAIVWLTSLMVVLEVRKAFVSDAHDESNRHEEGSYIDDDT 195
Query: 180 XXXXXXXXXXRRSLWPLV---------------------------RAVWLKVARNPNVYA 212
+SL V ++V K+A NPN++A
Sbjct: 196 VVGGSGTSEDMQSLEEGVSDATNQDLKGEEAVTVAGVNGARLPLFKSVARKLACNPNLHA 255
Query: 213 GVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMG 254
V+G++WAC++NR H+ P +EGSV IMS++G+GL+MFSMG
Sbjct: 256 SVIGISWACISNRSHLTLPPALEGSVQIMSRSGLGLAMFSMG 297
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 4 LYFALGLGY-GSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
LYFAL LGY S RWW++FTA+ +A+NR+V +DP+ + +
Sbjct: 371 LYFALALGYCSSRRWWQIFTAEDSEAINRMVVWFAFPFFTFEFTLHLDPYNVRCSLIAAD 430
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
S WCI+GFSLA+L N+LVVG+P+
Sbjct: 431 SIAKLIIVAAI-------SIGVMLKFRKEGLCAAVTDWCISGFSLASLTNSLVVGMPMAR 483
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRR 156
AMYG WA ++VQ+S+ Q IV+ L++ EVR+
Sbjct: 484 AMYGNWAGQIVVQLSIFQAIVWLTSLVVVLEVRK 517
>Os12g0133800 Similar to Auxin efflux carrier protein
Length = 250
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 103/197 (52%), Gaps = 43/197 (21%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ +LGV W+ V+ RW +E P+II S+ I+S G+G++MFS+GLFMAL
Sbjct: 97 VWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMAL 156
Query: 260 QDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXXXXXXXXXXXQAYTHLHEIHSPSS 319
Q +II CG L MA+R
Sbjct: 157 QPRIIACGNSLASYAMAVR----------------------------------------- 175
Query: 320 FFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFVFAKEYGLHAEILSTAVIFG 379
FL+ P + ++ + A + A LPQ I FVFAKEY +H ILSTAVIFG
Sbjct: 176 -FLVGPAVMAAASIAVGLRGVLLHIAIVQAA-LPQGIVPFVFAKEYNVHPNILSTAVIFG 233
Query: 380 TLASLPVLIVYYIVLGF 396
L +LP+ +VYYI+LG
Sbjct: 234 MLIALPITLVYYILLGL 250
>Os01g0802700 Auxin Efflux Carrier family protein
Length = 426
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 51/209 (24%)
Query: 190 RRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLS 249
+ +W V+ K+ + PN YA LG+ W+ + + P I+E S+ + T VGLS
Sbjct: 267 KHVIWMAVK----KLLQIPNTYASFLGLIWSLIAFKCGFSMPKIVEDSLFTIRTTAVGLS 322
Query: 250 MFSMGLFMALQDKIIVCGAGLTVLGMALRXXXXXXXXXXXXXXXXXXXXXXXXXXXQAYT 309
MFS G F+A Q + + CG + M ++
Sbjct: 323 MFSSGTFIARQSRFVPCGYKIASFSMVIK------------------------------- 351
Query: 310 HLHEIHSPSSFFLLSPEICLNSNGC--MHDTSPHDETARDEQAALPQSITTFVFAKEYGL 367
FL+ P + L ++ MH T H QAALP ++T+FV+A+EY +
Sbjct: 352 -----------FLIGPVVMLFASLVIGMHGTLLHIAVV---QAALPLAVTSFVYAEEYKV 397
Query: 368 HAEILSTAVIFGTLASLPVLIVYYIVLGF 396
HA+I+ST VI G SLPV IVYYI+LG
Sbjct: 398 HADIMSTGVILGIFISLPVTIVYYILLGL 426
>Os06g0660200 Similar to Auxin efflux carrier protein
Length = 630
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY A+ L YGSVRWW +FT DQC +NR V DP++++YR
Sbjct: 16 PLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISTNDPYSMNYRFLAAD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
S W IT FSL+TL NTLV+G+PLL
Sbjct: 76 SLQKLVILAALAVWHNLLSR-----YRRNGGAAASLDWTITLFSLSTLPNTLVMGIPLLR 130
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
AMYG ++ L+VQI V+Q+++++ L+L FE R
Sbjct: 131 AMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYR 163
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 60/79 (75%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ ++G+ W+ V+ RW+++ PSII+GS+ I+S G+G++MFS+GLFMAL
Sbjct: 477 VWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMAL 536
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q KII CG + MA+R
Sbjct: 537 QPKIISCGKTVATFAMAVR 555
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLG 395
QAALPQ I FVFAKEY H +ILSTAVIFG L +LP+ I+YY++LG
Sbjct: 583 QAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLG 629
>Os01g0643300 Similar to Auxin efflux carrier protein
Length = 589
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ +LG+AW+ V RWHV P+I+E S+ I+S G+G++MFS+GLFMAL
Sbjct: 436 VWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMAL 495
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q II CG V+ MA+R
Sbjct: 496 QPSIIACGKSAAVVSMAVR 514
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXXXX 62
PLY A+ L YGSVRWW +FT DQC +NR V DP+A++ R
Sbjct: 16 PLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNLRFLAAD 75
Query: 63 XXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPLLD 122
S W IT FSL+TL NTLV+G+PLL
Sbjct: 76 TLQKLLVLAGLAAWSRLPSRTGAPR----------LDWSITLFSLSTLPNTLVMGIPLLI 125
Query: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
AMYG ++ L+VQI V+Q I+++ L+L FE R
Sbjct: 126 AMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFR 158
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H ILSTAVIFG L +LP+ ++YYI+LG
Sbjct: 542 QAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
>Os02g0743400 Auxin transport protein REH1
Length = 595
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
M PLY A+ L YGSV+WWR+FT DQC +NR V +P+ ++ R
Sbjct: 14 MVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIA 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
S R W IT FSL+TL NTLV+G+PL
Sbjct: 74 ADTLQKLMVLAMLTAWSHL-SRRGS------------LEWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
L MYG+++ L+VQI V+Q I+++ L+L FE R
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYR 155
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ ++G+ W+ V RW+ E P+I+ S+ I+S G+G++MFS+GLFMAL
Sbjct: 442 VWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGLFMAL 501
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q II CG + MA+R
Sbjct: 502 QPHIIACGNKVATYAMAVR 520
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H ILSTAVIFG L +LP+ +VYYI+LG
Sbjct: 548 QAALPQGIVPFVFAKEYSVHPSILSTAVIFGMLIALPITLVYYILLGL 595
>Os06g0232300 Similar to Auxin transport protein REH1
Length = 592
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 1 MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVXXXXXXXXXXXXXXRIDPFALSYRVXX 60
M PLY A+ L YGSV+WWR+FT DQC +NR V +P+ ++ R
Sbjct: 14 MVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIA 73
Query: 61 XXXXXXXXXXXXXXXXXXXXSTRCCXXXXXXXXXXXXFSWCITGFSLATLNNTLVVGVPL 120
S R W IT FSL+TL NTLV+G+PL
Sbjct: 74 ADTLQKLIVLALLTLWSHL-SRRGS------------LEWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
L MYG+++ L+VQI V+Q I+++ L+L FE R
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYR 155
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ ++G+ W+ V RW+ E P+II S+ I+S G+G++MFS+GLFMAL
Sbjct: 439 VWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMAL 498
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q +II CG + MA+R
Sbjct: 499 QPRIIACGNKVATFAMAVR 517
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H +ILSTAVIFG L +LP+ +VYYI+LG
Sbjct: 545 QAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLGL 592
>Os11g0137000 Similar to PIN1-like auxin transport protein
Length = 554
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
VW K+ RNPN Y+ +LGV W+ V+ RW +E P+II S+ I+S G+G++MFS+GLFMAL
Sbjct: 401 VWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMAL 460
Query: 260 QDKIIVCGAGLTVLGMALR 278
Q +II CG L MA+R
Sbjct: 461 QPRIIACGNSLASYAMAVR 479
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 349 QAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYIVLGF 396
QAALPQ I FVFAKEY +H ILSTAVIFG L +LP+ +VYYI+LG
Sbjct: 507 QAALPQGIVPFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 554
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,142,595
Number of extensions: 272369
Number of successful extensions: 683
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 679
Number of HSP's successfully gapped: 31
Length of query: 398
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 295
Effective length of database: 11,657,759
Effective search space: 3439038905
Effective search space used: 3439038905
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 157 (65.1 bits)