Os01g0919800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Efflux carrier of polar auxin transport.
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Os01g0919800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Efflux carrier of polar auxin transport.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.09 | 0.438 | 12.3 | -0.674 | 0.95 | 1.29 | -0.791 | 0.867 | -0.0651 | 8.67 | 26.02 | 120 | -- | -- |
| 88.18 | 0.437 | 12.3 | -0.519 | 0.923 | 1.27 | -0.83 | -- | -0.0245 | 8.72 | 26.51 | 138 | -- | -- |
| 88.98 | 0.439 | 12.3 | -0.708 | 0.945 | 1.33 | -- | 1.01 | -0.0731 | 8.88 | 26.24 | 113 | -- | -- |
| 90.47 | 0.443 | 12.3 | -0.551 | 0.928 | 1.28 | -- | -- | -0.0145 | 8.92 | 26.71 | 112 | -- | -- |
| 116.72 | 0.503 | 12.3 | -0.402 | -- | 1.79 | -- | -0.298 | -0.0098 | -- | 33.9 | 524 | -- | -- |
| 110.41 | 0.493 | 12.4 | -0.843 | 0.992 | -- | -0.987 | -- | -0.3 | 7.65 | -- | -- | -- | -- |
| 113.16 | 0.498 | 12.4 | -0.867 | 0.991 | -- | -- | -- | -0.299 | 7.66 | -- | -- | -- | -- |
| 116.74 | 0.503 | 12.3 | -0.445 | -- | 1.78 | -- | -- | -0.0227 | -- | 33.7 | 522 | -- | -- |
| 97.6 | 0.46 | 12.3 | -- | 0.923 | 1.52 | -- | -- | 0.0714 | 9.33 | 26.97 | 112 | -- | -- |
| 166.05 | 0.602 | 12.4 | -0.854 | -- | -- | -- | -- | -0.284 | -- | -- | -- | -- | -- |
| 132.98 | 0.539 | 12.3 | -- | 0.984 | -- | -- | -- | -0.202 | 7.72 | -- | -- | -- | -- |
| 121.67 | 0.514 | 12.3 | -- | -- | 1.95 | -- | -- | 0.0445 | -- | 46.55 | 544 | -- | -- |
| 185.29 | 0.635 | 12.4 | -- | -- | -- | -- | -- | -0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.51 | temperature | 25 | 270 | < th | dose dependent | sin | 19 | NA |
| 3 | 85.07 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 25 | 86.09 | temperature | 25 | 10 | < th | dose dependent | sin | 16 | NA |
| 57 | 86.93 | temperature | 20 | 10 | > th | dose dependent | sin | 14 | NA |
| 68 | 87.12 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 94 | 87.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 100 | 87.65 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 15 |
| 106 | 87.69 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 18 |
| 114 | 87.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 136 | 87.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 143 | 87.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 151 | 88.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 181 | 88.18 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 185 | 88.19 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 195 | 88.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 198 | 88.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 212 | 88.32 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 257 | 88.48 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 270 | 88.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 297 | 88.62 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 344 | 88.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 352 | 88.82 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 367 | 88.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 385 | 88.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 386 | 88.91 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 403 | 88.94 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 6 |
| 422 | 88.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 429 | 89.00 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 444 | 89.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 455 | 89.04 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 481 | 89.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 554 | 89.25 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 564 | 89.28 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 646 | 89.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 691 | 89.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 995 | 90.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 23 |