Os06g0660200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin efflux carrier protein.
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Os06g0660200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin efflux carrier protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.19 | 0.56 | 2.87 | -0.243 | 0.0411 | -0.186 | -0.0362 | -4.51 | 0.13 | 7.57 | 6.9 | 26 | -- | -- |
| 143.58 | 0.562 | 2.9 | -0.196 | 0.037 | 1.33 | -0.0937 | -- | 0.121 | 9.15 | 7.308 | 15 | -- | -- |
| 142.2 | 0.555 | 2.87 | -0.244 | 0.0415 | -0.189 | -- | -4.51 | 0.131 | 7.73 | 6.9 | 25 | -- | -- |
| 143.58 | 0.562 | 2.9 | -0.199 | 0.0416 | 1.34 | -- | -- | 0.121 | 7.68 | 7.316 | 17 | -- | -- |
| 142.29 | 0.556 | 2.87 | -0.243 | -- | -0.193 | -- | -4.51 | 0.13 | -- | 6.9 | 25 | -- | -- |
| 151.3 | 0.577 | 2.91 | -0.3 | 0.0606 | -- | -0.347 | -- | 0.0848 | 13.7 | -- | -- | -- | -- |
| 151.74 | 0.577 | 2.91 | -0.311 | 0.0635 | -- | -- | -- | 0.0824 | 12.2 | -- | -- | -- | -- |
| 143.67 | 0.561 | 2.9 | -0.199 | -- | 1.34 | -- | -- | 0.121 | -- | 7.316 | 17 | -- | -- |
| 144.58 | 0.563 | 2.89 | -- | 0.0413 | 1.44 | -- | -- | 0.145 | 7.63 | 7.316 | 17 | -- | -- |
| 152 | 0.576 | 2.91 | -0.314 | -- | -- | -- | -- | 0.0815 | -- | -- | -- | -- | -- |
| 154.3 | 0.581 | 2.9 | -- | 0.0679 | -- | -- | -- | 0.117 | 12.5 | -- | -- | -- | -- |
| 144.68 | 0.562 | 2.89 | -- | -- | 1.43 | -- | -- | 0.145 | -- | 7.316 | 17 | -- | -- |
| 154.59 | 0.58 | 2.9 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.12 | wind | 7 | 10 | > th | dose dependent | rect. | 12 | 2 |
| 3 | 133.30 | wind | 7 | 10 | > th | dose independent | rect. | 12 | 3 |
| 42 | 136.18 | radiation | 30 | 10 | > th | dose independent | rect. | 13 | 1 |
| 45 | 136.67 | radiation | 20 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 89 | 138.56 | wind | 7 | 10 | > th | dose independent | rect. | 2 | 13 |
| 103 | 138.81 | wind | 7 | 10 | > th | dose dependent | rect. | 2 | 13 |
| 113 | 139.08 | wind | 1 | 30 | < th | dose independent | rect. | 23 | 1 |
| 471 | 141.13 | wind | 7 | 10 | > th | dose independent | sin | 1 | NA |
| 473 | 141.16 | wind | 7 | 30 | < th | dose independent | rect. | 3 | 23 |
| 478 | 141.20 | wind | 7 | 10 | > th | dose dependent | sin | 2 | NA |
| 488 | 141.34 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 498 | 141.42 | wind | 7 | 10 | < th | dose independent | sin | 1 | NA |
| 529 | 141.58 | wind | 9 | 10 | < th | dose independent | sin | 4 | NA |
| 571 | 141.71 | wind | 1 | 30 | > th | dose independent | sin | 17 | NA |
| 652 | 142.01 | humidity | 70 | 90 | < th | dose independent | rect. | 12 | 2 |