BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0660200 Os06g0660200|AK101191
(630 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0660200 Similar to Auxin efflux carrier protein 1137 0.0
Os06g0232300 Similar to Auxin transport protein REH1 660 0.0
Os01g0643300 Similar to Auxin efflux carrier protein 641 0.0
Os11g0137000 Similar to PIN1-like auxin transport protein 626 e-179
Os02g0743400 Auxin transport protein REH1 390 e-108
Os12g0133800 Similar to Auxin efflux carrier protein 296 3e-80
Os01g0715600 Similar to Auxin efflux carrier component 2 (A... 196 3e-50
Os01g0919800 Similar to Efflux carrier of polar auxin trans... 179 8e-45
Os08g0529000 Similar to Auxin efflux carrier component 1 (P... 178 1e-44
Os01g0802700 Auxin Efflux Carrier family protein 169 4e-42
Os09g0505400 Auxin Efflux Carrier family protein 151 2e-36
Os11g0122800 130 2e-30
>Os06g0660200 Similar to Auxin efflux carrier protein
Length = 630
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/630 (90%), Positives = 572/630 (90%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS
Sbjct: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN
Sbjct: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
Query: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIXXXXXXXXXXXXXXXXXXXXXXXXX 240
IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVI
Sbjct: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGVSRAYG 240
Query: 241 XXNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMASPMXXXXX 300
NAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMASPM
Sbjct: 241 ASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMASPMAQHGG 300
Query: 301 XXXXXXXLDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNSNSNKELHMFVWS 360
LDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNSNSNKELHMFVWS
Sbjct: 301 AGGRAQGLDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNSNSNKELHMFVWS 360
Query: 361 SSASPVSEANLRNAVNHAASTDFXXXXXXXXXXXXXXXXXXXSGSVTPAAKNGGGELEIE 420
SSASPVSEANLRNAVNHAASTDF SGSVTPAAKNGGGELEIE
Sbjct: 361 SSASPVSEANLRNAVNHAASTDFASAPPPAAVPVGGATPKGVSGSVTPAAKNGGGELEIE 420
Query: 421 DGLKSPAAGLAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLILIMVWRK 480
DGLKSPAAGLAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLILIMVWRK
Sbjct: 421 DGLKSPAAGLAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLILIMVWRK 480
Query: 481 LIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKI 540
LIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKI
Sbjct: 481 LIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKI 540
Query: 541 ISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYN 600
ISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYN
Sbjct: 541 ISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYN 600
Query: 601 CHPQILSTAVIFGMLIALPITILYYVLLGI 630
CHPQILSTAVIFGMLIALPITILYYVLLGI
Sbjct: 601 CHPQILSTAVIFGMLIALPITILYYVLLGI 630
>Os06g0232300 Similar to Auxin transport protein REH1
Length = 592
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/633 (58%), Positives = 426/633 (67%), Gaps = 44/633 (6%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MITG D Y V+ A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
TN+PY+MN RF+AAD+LQKL++LA L +W +L R SL+WTITLFSLSTLPN
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRR--------GSLEWTITLFSLSTLPN 112
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
TLVMGIPLL+ MYG+FSGSLMVQIVVLQ +IWYTLMLF+FEYRGA+ LI+EQF PD +
Sbjct: 113 TLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQF-PDTAGA 171
Query: 181 IASFRVDSDVVSLNG-REALQADAEVGRDGRVHVVIXXXXXXXXXXXXXXXXXXXXXXXX 239
IAS VD+DVVSL+G R+ ++ +AEV DG++HV +
Sbjct: 172 IASIVVDADVVSLDGRRDMIETEAEVKEDGKIHVTV---------RRSNASRSDVYSRRS 222
Query: 240 XXXNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFS-GSKMASQMASPMXXX 298
++ TPR SNLT EIYSLQ+SR PTPR SSFN DFY+M S A+ A +
Sbjct: 223 MGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFAAGDAFGVRTG 282
Query: 299 XXXXXXXXXLDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNSNSNKELHMFV 358
D NK +G P P P P+K G + K+LHMFV
Sbjct: 283 ATPRPSNYEEDAAAPNK--AGSKYGQYPAPNPAMAAPPKPKKAANGQAKGEDGKDLHMFV 340
Query: 359 WSSSASPVSEANLRNA-VNHAASTDFXXXXXXXXXXXXXXXXXXXSGSVTPAAKNGGGEL 417
WSSSASPVS+ A N AA+ +V K G E
Sbjct: 341 WSSSASPVSDVFGNGAEYNDAAAVK------------------EVRMAVASPRKADGVE- 381
Query: 418 EIEDGLKSPAAGLAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLILIMV 477
D G+A + +G G PGL A MPPTSVMTRLILIMV
Sbjct: 382 --RDDFSFGNRGVAERDAEAGDEKSVAAAVSGEHGKPGLTPAPTAMPPTSVMTRLILIMV 439
Query: 478 WRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQ 537
WRKLIRNPNTYSSLIGL+WSLV FRWN +MP+II SISILSDAGLGMAMFSLGLFMALQ
Sbjct: 440 WRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMALQ 499
Query: 538 PKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAK 597
P+II+CG VATFAMAVRFLTGPAV+AA SIA+GLRG LLHVAIVQAALPQGIVPFVFAK
Sbjct: 500 PRIIACGNKVATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAK 559
Query: 598 EYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
EY+ HP ILSTAVIFGMLIALPIT++YY+LLG+
Sbjct: 560 EYSVHPDILSTAVIFGMLIALPITLVYYILLGL 592
>Os01g0643300 Similar to Auxin efflux carrier protein
Length = 589
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/651 (56%), Positives = 420/651 (64%), Gaps = 83/651 (12%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MI+G D Y V+AA+VPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
TNDPY+MN RFLAAD+LQKL++LA LA W L SR A LDW+ITLFSLSTLPN
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSR-----TGAPRLDWSITLFSLSTLPN 115
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
TLVMGIPLL AMYG +SGSLMVQIVVLQ +IWYTLMLFLFE+R A+ LI++QF PD AS
Sbjct: 116 TLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQF-PDTAAS 174
Query: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIXXXXXXXXXXXXXXXXXXXXXXXXX 240
I S VD DVVSL G A + +AEV DGR+HV
Sbjct: 175 IVSLHVDPDVVSLEGGHA-ETEAEVAADGRLHVT------------------VRRSSVSR 215
Query: 241 XXNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFS------------GSKMA 288
+TPR SNLTG EIYSL +SR PTPR S+FN ADF+AM GS
Sbjct: 216 RSLLVTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFG 275
Query: 289 SQMASPMXXXXXXXXXXXXLDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNS 348
+ + DE +A PP PA G + +
Sbjct: 276 ASELYSLQSSRGPTPRQSNFDEH---------SARPPKPPATTTGAL------------N 314
Query: 349 NSNKELHMFVWSSSASPVSEAN---LRNAVNHAASTDFXXXXXXXXXXXXXXXXXXXSGS 405
+ KELHMFVWSSSASPVSE + + + + D
Sbjct: 315 HDAKELHMFVWSSSASPVSEVSGLPVFSGGGGGGALDVGAKEIHM--------------- 359
Query: 406 VTPA---AKNGGGELEIEDGLKSPAAGLAAKFPVSGSPYVAPR---KKGGGADVPGLAEA 459
V PA NG G+ E G + G + S + + P+ G A
Sbjct: 360 VIPADLPQNNGSGKEHEEYGAVALGGGGGGE-NFSSTAELHPKVVDVDGPNAGGGAAGAG 418
Query: 460 AHPMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILS 519
+ MPP SVMTRLILIMVWRKLIRNPNTYSSL+GL WSLV+FRW++ MP+I++ SISILS
Sbjct: 419 QYQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILS 478
Query: 520 DAGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHV 579
DAGLGMAMFSLGLFMALQP II+CGK+ A +MAVRFL GPAV+AA SIAIGLRG LLHV
Sbjct: 479 DAGLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHV 538
Query: 580 AIVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
AIVQAALPQGIVPFVFAKEYN HP ILSTAVIFGMLIALPIT+LYY+LLG+
Sbjct: 539 AIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL 589
>Os11g0137000 Similar to PIN1-like auxin transport protein
Length = 554
Score = 626 bits (1615), Expect = e-179, Method: Compositional matrix adjust.
Identities = 358/639 (56%), Positives = 411/639 (64%), Gaps = 94/639 (14%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MIT D+Y VL A+VPLYVAM LAY SVRWW IF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
TN+P++MN RFLAAD+LQKL++LA LA+W L +R SLDW ITLFSLSTLPN
Sbjct: 61 TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSAR--------GSLDWLITLFSLSTLPN 112
Query: 121 TLVMGIPLLRAMYGDF----SGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPD 176
TLVMGIPLL+ MY SGSLMVQIVVLQ +IWYTLMLFLFEYRGA+ L+ EQF PD
Sbjct: 113 TLVMGIPLLKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQF-PD 171
Query: 177 VGASIASFRVDSDVVSLNGREA----LQADAEVGRDGRVHVVIXXXXXXXXXXXXXXXXX 232
ASI SFRVDSDVVSL G LQA+AEVG DGR+ V +
Sbjct: 172 TAASIVSFRVDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTV-------RKSTSSRSEA 224
Query: 233 XXXXXXXXXXNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMA 292
+M PR SNL+GVEIYSLQ+SR PTPR SSFN A+F+
Sbjct: 225 ACSHGTQSHSQSMQPRVSNLSGVEIYSLQSSRNPTPRGSSFNHAEFF------------- 271
Query: 293 SPMXXXXXXXXXXXXLDEQVTNKFASGKAADPPSYPAPNPGMMPAPRKKELGGSNSNSNK 352
N +GK D A G P P + K
Sbjct: 272 ---------------------NIVGNGKQGDEEKGAAGGGGHSPQPVVGK--------RK 302
Query: 353 ELHMFVWSSSASPVSEANLRNAVNHAASTDFXXXXXXXXXXXXXXXXXXXSGSVTPAAKN 412
+LHMFVWSSSASPVSE G+ AK
Sbjct: 303 DLHMFVWSSSASPVSE-------------------RAAAAAAGAVHVFGGGGADHGDAKG 343
Query: 413 GGGELEIEDGLKSPAAG-LAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTR 471
E G K+ G +K + + + P+ G G A MPP SVMTR
Sbjct: 344 AQAYDEYSFGNKNEKDGPTLSKLGSNSTAQLRPKDDGEG--------MAAAMPPASVMTR 395
Query: 472 LILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLG 531
LILIMVWRKLIRNPNTYSSL+G++WSLVS+RW I+MP+II SISILSDAGLGMAMFSLG
Sbjct: 396 LILIMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLG 455
Query: 532 LFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIV 591
LFMALQP+II+CG ++A++AMAVRFL GPAV+AA SIA+GLRGVLLH+AIVQAALPQGIV
Sbjct: 456 LFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIV 515
Query: 592 PFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
PFVFAKEYN HP ILSTAVIFGMLIALPIT++YY+LLG+
Sbjct: 516 PFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 554
>Os02g0743400 Auxin transport protein REH1
Length = 595
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/373 (56%), Positives = 248/373 (66%), Gaps = 23/373 (6%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MIT D Y V+ A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
TN+PY+MN RF+AAD+LQKL++LA L W +L R SL+WTITLFSLSTLPN
Sbjct: 61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRR--------GSLEWTITLFSLSTLPN 112
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180
TLVMGIPLL+ MYG+FSGSLMVQIVVLQ +IWYTLMLF+FEYRGA+ LI+EQF PD A+
Sbjct: 113 TLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQF-PDTAAN 171
Query: 181 IASFRVDSDVVSLNG-REALQADAEVGRDGRVHVVIXXXXXXXXXXXXXXXXXXXXXXXX 239
IAS VD DVVSL+G R+A++ + EV DGR+HV +
Sbjct: 172 IASIVVDPDVVSLDGRRDAIETETEVKEDGRIHVTV---------RRSNASRSDIYSRRS 222
Query: 240 XXXNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMASPMXXXX 299
++ TPR SNLT EIYSLQ+SR PTPR SSFN DFY+M S +
Sbjct: 223 MGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFGAADAFGVRTG 282
Query: 300 XXXXXXXXLDEQVTNKF---ASGKAADPPSYPAPNPGMMPAPRKKELGGSNSNSNKE-LH 355
D+ K+ AS A YPAPNP + AP+ + +N + E LH
Sbjct: 283 ATPRPSNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSSAPKGAKKAATNGQAKGEDLH 342
Query: 356 MFVWSSSASPVSE 368
MFVWSSSASPVS+
Sbjct: 343 MFVWSSSASPVSD 355
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/168 (84%), Positives = 155/168 (92%)
Query: 463 MPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAG 522
MPPTSVMTRLILIMVWRKLIRNPNTYSSLIGL+WSLV FRWN +MP+I+ SISILSDAG
Sbjct: 428 MPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAG 487
Query: 523 LGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIV 582
LGMAMFSLGLFMALQP II+CG VAT+AMAVRFL GPAV+AA S A+GLRG LLHVAIV
Sbjct: 488 LGMAMFSLGLFMALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIV 547
Query: 583 QAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
QAALPQGIVPFVFAKEY+ HP ILSTAVIFGMLIALPIT++YY+LLG+
Sbjct: 548 QAALPQGIVPFVFAKEYSVHPSILSTAVIFGMLIALPITLVYYILLGL 595
>Os12g0133800 Similar to Auxin efflux carrier protein
Length = 250
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/276 (60%), Positives = 193/276 (69%), Gaps = 27/276 (9%)
Query: 356 MFVWSSSASPVSEANLRNAVNHAASTDFXXXXXXXXXXXXXXXXXXXSGSVTPAAKNGGG 415
MFVWSSSASPVSE A A G+ AK
Sbjct: 1 MFVWSSSASPVSERAAAAAAAGAVHV------------------FGGGGADHGDAKGAQA 42
Query: 416 ELEIEDGLKSPAAG-LAAKFPVSGSPYVAPRKKGGGADVPGLAEAAHPMPPTSVMTRLIL 474
E G K+ G +K + + + P+ G G A MPP SVMTRLIL
Sbjct: 43 YDEYSFGNKNEKDGPTLSKLGSNSTAQLRPKDDGEGR--------AAAMPPASVMTRLIL 94
Query: 475 IMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFM 534
IMVWRKLIRNPNTYSSL+G++WSLVS+RW I+MP+II SISILSDAGLGMAMFSLGLFM
Sbjct: 95 IMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFM 154
Query: 535 ALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFV 594
ALQP+II+CG ++A++AMAVRFL GPAV+AA SIA+GLRGVLLH+AIVQAALPQGIVPFV
Sbjct: 155 ALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFV 214
Query: 595 FAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
FAKEYN HP ILSTAVIFGMLIALPIT++YY+LLG+
Sbjct: 215 FAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 250
>Os01g0715600 Similar to Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux
carrier AGR) (Polar-auxin-transport efflux component
AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1)
(AtEIR1) (WAVY6)
Length = 311
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 119/168 (70%), Gaps = 8/168 (4%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
M++ +DIY VL A VPLYVAM LAY S++WW +FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
T DPY MN + + +D LQK + L A A DW IT FSLSTLPN
Sbjct: 61 TTDPYDMNIKLIYSDILQKSLALLGFAA--------ISKACCAEKFDWLITGFSLSTLPN 112
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKAL 168
TL++GIPLL+ MYG+ +G L+ QIVVLQS+IWYTL+LFLFE R A +
Sbjct: 113 TLIVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGM 160
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 108/140 (77%)
Query: 486 NTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGK 545
T S GL+W+LV FRW+I++P I+ SI +LSD GLGMAMFSLGLF ALQ KII+CG
Sbjct: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
Query: 546 TVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQI 605
A+A+RF GPA++ +S AIG+RGVLL +AIVQAALPQGIVPFVFAKEYN I
Sbjct: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
Query: 606 LSTAVIFGMLIALPITILYY 625
LSTA+I GM++A+P+ + YY
Sbjct: 283 LSTAIIVGMMVAVPVALAYY 302
>Os01g0919800 Similar to Efflux carrier of polar auxin transport
Length = 363
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 115/165 (69%), Gaps = 6/165 (3%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MI D+Y V+AA VPLY A+FL YGSVRWW IFT +QC +NR VA FA+P +F F
Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTL 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
DP+ +NYR +AAD + K VI+A + W +R+ GG A S W+IT FSLSTL N
Sbjct: 61 HTDPFQVNYRAVAADVISKAVIVAVIGAW----ARFMSKGGCAVS--WSITSFSLSTLTN 114
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGA 165
+LV+G+P+ RAMYG+++ L+VQ+ V Q+++W TL+LF+ E R A
Sbjct: 115 SLVVGVPMARAMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKA 159
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 113/150 (75%)
Query: 479 RKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQP 538
KL RNPNTY+S +G+ W+ ++ R +I +PS +GS+ I+S +G GMAMFS+GLFMA Q
Sbjct: 210 HKLARNPNTYASFVGITWACLANRLHIALPSAFEGSVLIMSKSGTGMAMFSMGLFMAQQE 269
Query: 539 KIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKE 598
KII+CG + A + ++F GPA +A SIA+GLRG +L VAI+QAALPQ I F+FAKE
Sbjct: 270 KIIACGTSFAALGLVLKFALGPAAMAIGSIAVGLRGDVLRVAIIQAALPQSITSFIFAKE 329
Query: 599 YNCHPQILSTAVIFGMLIALPITILYYVLL 628
Y H +LSTAVIFGML++LP+ + +Y++L
Sbjct: 330 YGLHADVLSTAVIFGMLVSLPLLVGFYIVL 359
>Os08g0529000 Similar to Auxin efflux carrier component 1 (PIN-FORMED protein)
(AtPIN1)
Length = 370
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 111/150 (74%)
Query: 480 KLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPK 539
KL RNPN Y+S++G+VW+ +++RW++ +P I+ GS+ ++S G GM+MFS+GLFM Q +
Sbjct: 219 KLARNPNVYASVLGVVWACIAYRWHLSLPGIVTGSLQVMSRTGTGMSMFSMGLFMGQQER 278
Query: 540 IISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEY 599
+I+CG + MA+RF+ GP + A+GLRG +LH+AI+QAALPQ I FVFAKEY
Sbjct: 279 VIACGAGLTALGMALRFVAGPLATLVGAAALGLRGDVLHLAIIQAALPQSIASFVFAKEY 338
Query: 600 NCHPQILSTAVIFGMLIALPITILYYVLLG 629
H +LSTAVIFG LI+LPI I YY +LG
Sbjct: 339 GLHADVLSTAVIFGTLISLPILIAYYAVLG 368
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MI D+Y V+ A+ PLY A+ L YGSVRWW FT +QC+ IN V F++P +F F+
Sbjct: 1 MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
DP++MNYR +AAD++ K + +AA+A +R A + W+IT FSL+ L N
Sbjct: 61 RTDPFAMNYRVIAADAVSKAIAIAAMA--AWARTRCGCAAAKAGAQSWSITGFSLAALNN 118
Query: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGA----------KALIS 170
TLV+G+PLL AMYG ++ L+VQI V+QS++W+ L+L FE R A A++S
Sbjct: 119 TLVVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKAWVVGGGGGVGPAVMS 178
Query: 171 EQFPPD 176
PP+
Sbjct: 179 SSSPPE 184
>Os01g0802700 Auxin Efflux Carrier family protein
Length = 426
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 114/172 (66%), Gaps = 14/172 (8%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
MITG ++Y V+ A+ PLY A L YGSVRW F+ +QC+GIN FVA++AVP+L F +S
Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS 60
Query: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRN----------GGAAASLDWTI 110
TN+ Y MN R +AAD+LQK V+L L W + + R+ ++ L W I
Sbjct: 61 TNNVYKMNGRLIAADTLQKAVLLLGLMAW----ALWERSRARGAGAKAKAAVSSPLQWVI 116
Query: 111 TLFSLSTLPNTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEY 162
T FS+++LPNT++MG+PLL MYG S LM QIVV+Q IWY +++FL+EY
Sbjct: 117 TCFSVASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYNVIIFLYEY 168
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 114/160 (71%)
Query: 471 RLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSL 530
+ ++ M +KL++ PNTY+S +GL+WSL++F+ MP I++ S+ + +G++MFS
Sbjct: 267 KHVIWMAVKKLLQIPNTYASFLGLIWSLIAFKCGFSMPKIVEDSLFTIRTTAVGLSMFSS 326
Query: 531 GLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGI 590
G F+A Q + + CG +A+F+M ++FL GP V+ S+ IG+ G LLH+A+VQAALP +
Sbjct: 327 GTFIARQSRFVPCGYKIASFSMVIKFLIGPVVMLFASLVIGMHGTLLHIAVVQAALPLAV 386
Query: 591 VPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLGI 630
FV+A+EY H I+ST VI G+ I+LP+TI+YY+LLG+
Sbjct: 387 TSFVYAEEYKVHADIMSTGVILGIFISLPVTIVYYILLGL 426
>Os09g0505400 Auxin Efflux Carrier family protein
Length = 398
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 117/196 (59%), Gaps = 43/196 (21%)
Query: 477 VWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMAL 536
VW K+ RNPN Y+ ++G+ W+ V+ RW+++ PSII+GS+ I+S G+G++MFS+GLFMAL
Sbjct: 200 VWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMAL 259
Query: 537 QPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIV-------------- 582
Q KII CG + MA+RF+ GPA A + A+GLRG LL +AI+
Sbjct: 260 QDKIIVCGAGLTVLGMALRFVAGPAATAVGAFALGLRGDLLRLAIIQAYTHLHEIHSPSS 319
Query: 583 -----------------------------QAALPQGIVPFVFAKEYNCHPQILSTAVIFG 613
QAALPQ I FVFAKEY H +ILSTAVIFG
Sbjct: 320 FFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFVFAKEYGLHAEILSTAVIFG 379
Query: 614 MLIALPITILYYVLLG 629
L +LP+ I+YY++LG
Sbjct: 380 TLASLPVLIVYYIVLG 395
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
Query: 16 PLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISTNDPYSMNYRFLAAD 75
PLY A+ L YGSVRWW +FT DQC +NR VA FAVP +F F + DP++++YR LAAD
Sbjct: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVACFAVPFFAFDFAARIDPFALSYRVLAAD 62
Query: 76 SLQKLVILAALAVWHNLLSR-----YRRNGGAAASLDWTITLFSLSTLPNTLVMGIPLLR 130
+L KL + ALA S G W IT FSL+TL NTLV+G+PLL
Sbjct: 63 ALSKLAVALALAACAAAASTRCCGSGGGKRGGGGGFSWCITGFSLATLNNTLVVGVPLLD 122
Query: 131 AMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYR 163
AMYG ++ L+VQI V+Q+++++ L+L FE R
Sbjct: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVR 155
>Os11g0122800
Length = 603
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 8/206 (3%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAY-GSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFI 59
MI DI +L+AI PLY A+ L Y S RWW IFT + I VA FA+P +F F
Sbjct: 12 MIGWVDIGKILSAIAPLYFALVLGYCSSKRWWRIFTAEDSEAI--MVAWFALPFFTFEFT 69
Query: 60 STNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLP 119
DPY++ Y +AADS+ KL+I+ + + + +R+ G A +DW I+ FSL++L
Sbjct: 70 LHLDPYNVRYSLIAADSISKLIIVIVIGI--GVGLIFRKEGLCTAVIDWCISGFSLASLT 127
Query: 120 NTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGA 179
N+LV+G+P+ RAMYG+++G ++VQ+ + Q+++W T ++ + E R KA +S+
Sbjct: 128 NSLVVGVPMARAMYGNWAGQVVVQLSIFQAIVWLTSLMVVLEVR--KAFVSDAHDESNRH 185
Query: 180 SIASFRVDSDVVSLNG-REALQADAE 204
S+ D VV +G E +Q+ E
Sbjct: 186 EEGSYIDDDTVVGGSGTSEDMQSLEE 211
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 125/206 (60%), Gaps = 6/206 (2%)
Query: 1 MITGRDIYDVLAAIVPLYVAMFLAY-GSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFI 59
MI DI +L+AI LY A+ L Y S RWW IFT + INR V FA P +F F
Sbjct: 355 MIGWVDIGKILSAITLLYFALALGYCSSRRWWQIFTAEDSEAINRMVVWFAFPFFTFEFT 414
Query: 60 STNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLP 119
DPY++ +AADS+ KL+I+AA+++ ++ ++R+ G AA DW I+ FSL++L
Sbjct: 415 LHLDPYNVRCSLIAADSIAKLIIVAAISI--GVMLKFRKEGLCAAVTDWCISGFSLASLT 472
Query: 120 NTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGA 179
N+LV+G+P+ RAMYG+++G ++VQ+ + Q+++W T ++ + E R KA +S+
Sbjct: 473 NSLVVGMPMARAMYGNWAGQIVVQLSIFQAIVWLTSLVVVLEVR--KAFVSDAHDESNSY 530
Query: 180 SIASFRVDSDVVSLNG-REALQADAE 204
SF D VV +G E +Q+ E
Sbjct: 531 EEGSFIDDDTVVGSSGTSEDMQSLEE 556
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,535,871
Number of extensions: 791139
Number of successful extensions: 3011
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2976
Number of HSP's successfully gapped: 24
Length of query: 630
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 523
Effective length of database: 11,448,903
Effective search space: 5987776269
Effective search space used: 5987776269
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)