Os02g0743400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin transport protein REH1.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0743400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Auxin transport protein REH1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.59 | 0.65 | 11.8 | -1.51 | 2.93 | 0.043 | -0.951 | -5.57 | 0.417 | 6.6 | 21.26 | 6 | -- | -- |
| 212.44 | 0.684 | 11.7 | -0.534 | 2.83 | -0.823 | -0.97 | -- | 0.67 | 6.87 | 26.3 | 7 | -- | -- |
| 193.53 | 0.653 | 11.8 | -1.52 | 2.93 | 0.0726 | -- | -5.64 | 0.419 | 6.59 | 21.57 | 4 | -- | -- |
| 211.05 | 0.677 | 11.7 | -0.55 | 2.74 | -0.863 | -- | -- | 0.659 | 6.78 | 26.7 | 145 | -- | -- |
| 465.1 | 1 | 11.8 | -0.333 | -- | -2.95 | -- | -1.03 | 1.07 | -- | 24.53 | 354 | -- | -- |
| 221.71 | 0.698 | 11.7 | -0.652 | 2.97 | -- | -0.592 | -- | 0.645 | 6.57 | -- | -- | -- | -- |
| 222.57 | 0.699 | 11.7 | -0.661 | 2.97 | -- | -- | -- | 0.647 | 6.54 | -- | -- | -- | -- |
| 458.11 | 0.997 | 11.7 | -0.131 | -- | -2.78 | -- | -- | 0.952 | -- | 24.55 | 375 | -- | -- |
| 218.53 | 0.688 | 11.7 | -- | 2.69 | -0.987 | -- | -- | 0.723 | 6.85 | 26.6 | 143 | -- | -- |
| 682.12 | 1.22 | 11.8 | -0.588 | -- | -- | -- | -- | 0.708 | -- | -- | -- | -- | -- |
| 234.09 | 0.716 | 11.7 | -- | 2.96 | -- | -- | -- | 0.721 | 6.56 | -- | -- | -- | -- |
| 458.52 | 0.997 | 11.7 | -- | -- | -2.79 | -- | -- | 0.974 | -- | 24.5 | 379 | -- | -- |
| 691.24 | 1.23 | 11.8 | -- | -- | -- | -- | -- | 0.773 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.49 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 6 | 175.78 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 7 | 175.82 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 14 | 176.13 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 17 | 176.28 | humidity | 90 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 23 | 176.66 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 24 | 176.74 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 33 | 177.19 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 8 |
| 40 | 177.42 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 6 | 15 |
| 48 | 177.58 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 54 | 177.64 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 55 | 177.65 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 101 | 178.41 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 13 |
| 107 | 178.45 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 151 | 178.94 | wind | 7 | 14400 | > th | dose dependent | sin | 0 | NA |
| 174 | 179.27 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 189 | 179.41 | wind | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 208 | 179.66 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 211 | 179.69 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 215 | 179.83 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 230 | 180.12 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 241 | 180.23 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 243 | 180.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 245 | 180.29 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 255 | 180.56 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 19 |
| 264 | 180.68 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 266 | 180.70 | wind | 9 | 14400 | < th | dose independent | sin | 23 | NA |
| 275 | 180.81 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 283 | 180.99 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 290 | 181.07 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 11 |
| 295 | 181.11 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 304 | 181.23 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 310 | 181.31 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 313 | 181.32 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 320 | 181.38 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 331 | 181.47 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 4 | 8 |
| 334 | 181.48 | wind | 9 | 14400 | > th | dose independent | sin | 21 | NA |
| 352 | 181.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 358 | 181.69 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 367 | 181.76 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 15 |
| 376 | 181.82 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 377 | 181.82 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 408 | 181.95 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 431 | 181.99 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 437 | 182.01 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 15 |
| 438 | 182.01 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 17 |
| 439 | 182.01 | radiation | 30 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 446 | 182.03 | wind | 7 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 486 | 182.12 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 522 | 182.21 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 22 |
| 532 | 182.25 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 549 | 182.29 | wind | 9 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 554 | 182.31 | radiation | 40 | 43200 | > th | dose independent | sin | 16 | NA |
| 555 | 182.31 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 580 | 182.37 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 584 | 182.38 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 631 | 182.49 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 634 | 182.51 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 638 | 182.52 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 641 | 182.53 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 663 | 182.60 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 13 |
| 667 | 182.62 | wind | 9 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 685 | 182.71 | radiation | 40 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 697 | 182.73 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 12 |
| 757 | 182.77 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 772 | 182.82 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 16 |
| 778 | 182.83 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 784 | 182.85 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 796 | 182.88 | wind | 9 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 817 | 182.92 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 820 | 182.93 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 864 | 182.95 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |