Os01g0802700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin Efflux Carrier family protein.
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Os01g0802700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Auxin Efflux Carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.8 | 0.3 | 2.8 | -0.657 | 0.14 | -17.4 | -0.427 | -80.6 | 0.105 | 4.99 | 9.5 | 29 | -- | -- |
| 254.91 | 0.744 | 3.25 | -1.12 | 0.561 | -7.84 | 1.09 | -- | -0.452 | 16 | 10.11 | 52 | -- | -- |
| 38.08 | 0.287 | 2.83 | -0.63 | 0.118 | -17.1 | -- | -79 | 0.0958 | 6.78 | 9.777 | 28 | -- | -- |
| 77.05 | 0.409 | 2.98 | -0.029 | 0.0985 | 1.57 | -- | -- | 0.0921 | 7.17 | 9 | 28 | -- | -- |
| 38.84 | 0.29 | 2.84 | -0.622 | -- | -17 | -- | -78.2 | 0.0914 | -- | 9.815 | 28 | -- | -- |
| 83.54 | 0.428 | 2.99 | -0.111 | 0.0747 | -- | 0.0977 | -- | 0.0615 | 6.93 | -- | -- | -- | -- |
| 83.56 | 0.428 | 2.99 | -0.109 | 0.0749 | -- | -- | -- | 0.0614 | 7.32 | -- | -- | -- | -- |
| 51 | 0.333 | 2.93 | 0.182 | -- | 3.95 | -- | -- | 0.246 | -- | 9.372 | 6 | -- | -- |
| 39.72 | 0.294 | 2.98 | -- | 0.0316 | 6.14 | -- | -- | 0.127 | 16.3 | 10.88 | 6 | -- | -- |
| 83.86 | 0.428 | 2.99 | -0.108 | -- | -- | -- | -- | 0.0627 | -- | -- | -- | -- | -- |
| 83.88 | 0.428 | 2.99 | -- | 0.0739 | -- | -- | -- | 0.0736 | 7.42 | -- | -- | -- | -- |
| 38.85 | 0.29 | 2.98 | -- | -- | 6.74 | -- | -- | 0.0936 | -- | 10.71 | 10 | -- | -- |
| 84.17 | 0.428 | 2.99 | -- | -- | -- | -- | -- | 0.0747 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.76 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 9 | 37.76 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 47 | 41.66 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 11 |
| 189 | 48.64 | wind | 9 | 30 | > th | dose dependent | sin | 14 | NA |
| 302 | 60.64 | wind | 9 | 30 | > th | dose independent | sin | 14 | NA |
| 348 | 66.46 | wind | 9 | 30 | < th | dose independent | sin | 14 | NA |
| 459 | 67.97 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 470 | 68.35 | radiation | 1 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 545 | 68.81 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 15 | 1 |
| 570 | 69.21 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 1 |
| 624 | 69.74 | radiation | 1 | 10 | < th | dose independent | rect. | 16 | 1 |
| 716 | 70.13 | temperature | 25 | 10 | < th | dose independent | rect. | 15 | 1 |
| 818 | 70.27 | wind | 9 | 30 | > th | dose dependent | no | NA | NA |