Os11g0137000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PIN1-like auxin transport protein.
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Os11g0137000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PIN1-like auxin transport protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 278.6 | 0.784 | 2.93 | 0.0533 | 0.0897 | -0.723 | -0.175 | 3.69 | 0.0877 | 15 | 1.099 | 16 | -- | -- |
| 289.76 | 0.793 | 2.89 | 0.209 | 0.0612 | -0.465 | 0.246 | -- | 0.128 | 14.4 | 1.1 | 16 | -- | -- |
| 278.68 | 0.778 | 2.93 | 0.0527 | 0.0885 | -0.717 | -- | 3.61 | 0.0873 | 14.2 | 1.095 | 16 | -- | -- |
| 289.86 | 0.793 | 2.89 | 0.199 | 0.0686 | -0.443 | -- | -- | 0.127 | 12.3 | 1.1 | 16 | -- | -- |
| 279.1 | 0.778 | 2.93 | 0.0563 | -- | -0.669 | -- | 3.58 | 0.0856 | -- | 1.082 | 16 | -- | -- |
| 294.08 | 0.804 | 2.89 | 0.251 | 0.104 | -- | 0.0993 | -- | 0.123 | 7.02 | -- | -- | -- | -- |
| 294.1 | 0.803 | 2.89 | 0.253 | 0.105 | -- | -- | -- | 0.122 | 6.63 | -- | -- | -- | -- |
| 290.14 | 0.793 | 2.89 | 0.2 | -- | -0.42 | -- | -- | 0.126 | -- | 1.093 | 16 | -- | -- |
| 290.88 | 0.794 | 2.89 | -- | 0.0694 | -0.469 | -- | -- | 0.105 | 12.4 | 1.1 | 16 | -- | -- |
| 294.68 | 0.802 | 2.89 | 0.255 | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
| 295.78 | 0.805 | 2.89 | -- | 0.109 | -- | -- | -- | 0.0942 | 6.49 | -- | -- | -- | -- |
| 291.17 | 0.795 | 2.89 | -- | -- | -0.447 | -- | -- | 0.104 | -- | 1.094 | 16 | -- | -- |
| 296.4 | 0.804 | 2.89 | -- | -- | -- | -- | -- | 0.0961 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 262.34 | humidity | 90.0 | 30 | > th | dose independent | rect. | 13 | 3 |
| 5 | 262.34 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 13 | 3 |
| 9 | 262.37 | humidity | 90.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 13 | 262.37 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 37 | 263.97 | wind | 1.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 42 | 264.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 43 | 265.22 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 265.30 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 46 | 265.30 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 50 | 265.44 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 51 | 265.45 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 57 | 265.56 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 75 | 265.72 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 76 | 265.72 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 79 | 265.72 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 83 | 265.72 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 92 | 265.72 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 93 | 265.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 113 | 265.72 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 121 | 265.73 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 122 | 265.73 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 123 | 265.74 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 126 | 265.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 128 | 265.75 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 129 | 265.75 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 132 | 265.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 133 | 265.75 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 135 | 265.75 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 140 | 265.75 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 141 | 265.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 143 | 265.75 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 148 | 265.75 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 159 | 266.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 164 | 266.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 165 | 266.34 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 178 | 267.04 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 179 | 267.05 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 212 | 267.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 213 | 267.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 219 | 268.75 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 233 | 271.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 236 | 271.98 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 11 | 3 |
| 247 | 273.03 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 252 | 273.27 | radiation | 10.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 300 | 275.03 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 321 | 275.90 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 334 | 276.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 423 | 277.48 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 477 | 278.41 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 480 | 278.50 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 540 | 279.82 | wind | 1.0 | 30 | > th | dose independent | sin | 6 | NA |
| 543 | 279.84 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 7 |
| 548 | 279.86 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 576 | 280.22 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 11 |
| 687 | 281.53 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 705 | 281.65 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 16 |
| 748 | 281.95 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 7 |
| 763 | 282.17 | wind | 1.0 | 10 | < th | dose independent | sin | 15 | NA |
| 775 | 282.23 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 11 |
| 802 | 282.36 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 804 | 282.37 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 818 | 282.47 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 879 | 282.72 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 896 | 282.83 | wind | 7.0 | 10 | < th | dose independent | rect. | 14 | 12 |
| 917 | 283.01 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 5 |
| 940 | 283.11 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 22 | 5 |
| 983 | 283.31 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 11 |
| 992 | 283.33 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 1 | 1 |