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Os01g0715600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux carrier AGR) (Polar-auxin-transport efflux component AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1) (AtEIR1) (WAVY6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.06 | 0.54 | 3.68 | 0.0822 | 0.492 | 1.07 | 0.961 | -0.498 | -0.0916 | 10.1 | 29.23 | 369 | -- | -- |
| 132.35 | 0.536 | 3.68 | 0.0519 | 0.477 | 1.12 | 0.984 | -- | -0.0838 | 10 | 28.61 | 385 | -- | -- |
| 134.3 | 0.54 | 3.7 | -0.0949 | 0.537 | 1.15 | -- | 0.901 | -0.14 | 7.93 | 24.63 | 574 | -- | -- |
| 135.03 | 0.541 | 3.69 | 0.0186 | 0.556 | 1.01 | -- | -- | -0.144 | 8.32 | 24.94 | 483 | -- | -- |
| 144.2 | 0.559 | 3.71 | -0.00752 | -- | 1.34 | -- | 0.557 | -0.0956 | -- | 30.26 | 615 | -- | -- |
| 148.11 | 0.571 | 3.73 | -0.268 | 0.671 | -- | 0.837 | -- | -0.338 | 8.5 | -- | -- | -- | -- |
| 150.16 | 0.574 | 3.73 | -0.245 | 0.677 | -- | -- | -- | -0.339 | 8.18 | -- | -- | -- | -- |
| 144.31 | 0.56 | 3.69 | 0.109 | -- | 1.36 | -- | -- | -0.0769 | -- | 30.35 | 596 | -- | -- |
| 135.03 | 0.541 | 3.69 | -- | 0.558 | 1.01 | -- | -- | -0.138 | 8.32 | 24.9 | 479 | -- | -- |
| 175.43 | 0.619 | 3.75 | -0.239 | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
| 151.74 | 0.576 | 3.72 | -- | 0.676 | -- | -- | -- | -0.312 | 8.2 | -- | -- | -- | -- |
| 144.61 | 0.56 | 3.69 | -- | -- | 1.33 | -- | -- | -0.0941 | -- | 30.38 | 590 | -- | -- |
| 176.94 | 0.621 | 3.74 | -- | -- | -- | -- | -- | -0.305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 17 | 129.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 12 |
| 32 | 130.00 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 46 | 130.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 20 | 16 |
| 63 | 130.86 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 67 | 130.98 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 72 | 131.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 73 | 131.08 | radiation | 1 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 85 | 131.10 | radiation | 1 | 4320 | < th | dose independent | rect. | 23 | 7 |
| 91 | 131.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 98 | 131.20 | radiation | 1 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 127 | 131.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 149 | 131.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 169 | 131.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 173 | 131.92 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 176 | 131.94 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 193 | 132.08 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 255 | 132.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 282 | 132.49 | radiation | 1 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 284 | 132.51 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 291 | 132.52 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 313 | 132.62 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 314 | 132.62 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 344 | 132.72 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 366 | 132.79 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 392 | 132.88 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 396 | 132.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 20 |
| 422 | 132.92 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 508 | 133.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 517 | 133.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 526 | 133.13 | radiation | 10 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 595 | 133.24 | radiation | 10 | 4320 | < th | dose independent | sin | 12 | NA |
| 605 | 133.26 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 617 | 133.28 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 618 | 133.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 636 | 133.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 692 | 133.37 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 693 | 133.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 728 | 133.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 9 |
| 744 | 133.46 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 767 | 133.50 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 768 | 133.50 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 793 | 133.54 | radiation | 1 | 4320 | < th | dose independent | sin | 9 | NA |
| 823 | 133.60 | radiation | 1 | 4320 | > th | dose independent | sin | 9 | NA |
| 855 | 133.66 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 873 | 133.69 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 889 | 133.71 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 919 | 133.75 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 921 | 133.75 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 936 | 133.77 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 939 | 133.77 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 963 | 133.80 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 985 | 133.84 | wind | 7 | 43200 | > th | dose independent | sin | 11 | NA |
| 997 | 133.85 | humidity | 80 | 43200 | > th | dose dependent | rect. | 4 | 8 |
