BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0715600 Os01g0715600|Os01g0715600
(311 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0715600 Similar to Auxin efflux carrier component 2 (A... 620 e-178
Os01g0919800 Similar to Efflux carrier of polar auxin trans... 272 2e-73
Os02g0743400 Auxin transport protein REH1 203 1e-52
Os01g0643300 Similar to Auxin efflux carrier protein 203 1e-52
Os06g0232300 Similar to Auxin transport protein REH1 203 1e-52
Os06g0660200 Similar to Auxin efflux carrier protein 197 9e-51
Os09g0505400 Auxin Efflux Carrier family protein 192 2e-49
Os11g0137000 Similar to PIN1-like auxin transport protein 190 9e-49
Os12g0133800 Similar to Auxin efflux carrier protein 184 1e-46
Os01g0802700 Auxin Efflux Carrier family protein 149 3e-36
Os08g0529000 Similar to Auxin efflux carrier component 1 (P... 145 3e-35
Os11g0122800 118 5e-27
>Os01g0715600 Similar to Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux
carrier AGR) (Polar-auxin-transport efflux component
AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1)
(AtEIR1) (WAVY6)
Length = 311
Score = 620 bits (1600), Expect = e-178, Method: Compositional matrix adjust.
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS
Sbjct: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL
Sbjct: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALVGFRW 180
LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALVGFRW
Sbjct: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALVGFRW 180
Query: 181 HIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALM 240
HIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALM
Sbjct: 181 HIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALM 240
Query: 241 GMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALA 300
GMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALA
Sbjct: 241 GMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALA 300
Query: 301 YYFAMIIPAIK 311
YYFAMIIPAIK
Sbjct: 301 YYFAMIIPAIK 311
>Os01g0919800 Similar to Efflux carrier of polar auxin transport
Length = 363
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 211/358 (58%), Gaps = 58/358 (16%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M+ W D+Y V+ ATVPLY A+ L Y S++WW++FT EQC +N+ VA F++P +F+
Sbjct: 1 MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTL 60
Query: 61 TTDPYDMNIKLIYSDILQKS--LALLGFAA--ISKACCAEKFDWLITGFSLSTLPNTLIV 116
TDP+ +N + + +D++ K+ +A++G A +SK CA W IT FSLSTL N+L+V
Sbjct: 61 HTDPFQVNYRAVAADVISKAVIVAVIGAWARFMSKGGCA--VSWSITSFSLSTLTNSLVV 118
Query: 117 GIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELR-AANGMAT------------- 162
G+P+ + MYGE A +L+ Q+ V Q+++W TLLLF+ E+R AA GM
Sbjct: 119 GVPMARAMYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKAAIGMYVDGAEAAAAAGKDV 178
Query: 163 --------------------------------------TTSSETTGLIWALVGFRWHIRL 184
T + G+ WA + R HI L
Sbjct: 179 EAAGAAAAAGTVVVAAAAGKPSLWALVKVVAHKLARNPNTYASFVGITWACLANRLHIAL 238
Query: 185 PLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALMGMSS 244
P S+ ++S G GMAMFS+GLF A Q KIIACG L L ++F LGPA M + S
Sbjct: 239 PSAFEGSVLIMSKSGTGMAMFSMGLFMAQQEKIIACGTSFAALGLVLKFALGPAAMAIGS 298
Query: 245 YAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALAYY 302
A+G+RG +L++AI+QAALPQ I F+FAKEY + AD+LSTA+I GM+V++P+ + +Y
Sbjct: 299 IAVGLRGDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPLLVGFY 356
>Os02g0743400 Auxin transport protein REH1
Length = 595
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 127/176 (72%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ D Y V+ A VPLYVAMILAY S+KWW++FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
T +PY MN++ I +D LQK + L A S +W IT FSLSTLPNTL++GIPL
Sbjct: 61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALV 176
LKGMYGE +G L+ QIVVLQ +IWYTL+LF+FE R A + T +T I ++V
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAANIASIV 176
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 107/140 (76%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GLIW+LV FRW+ +P IV SI +LSD GLGMAMFSLGLF ALQ IIACG
Sbjct: 451 NTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGLFMALQPHIIACGN 510
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
K A+A+RF GPA+M +S+A+G+RG LL +AIVQAALPQGIVPFVFAKEY+V I
Sbjct: 511 KVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPSI 570
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM++A+P+ L YY
Sbjct: 571 LSTAVIFGMLIALPITLVYY 590
>Os01g0643300 Similar to Auxin efflux carrier protein
Length = 589
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 120/161 (74%), Gaps = 3/161 (1%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M+S D Y V+ A VPLYVAM LAY S++WW +FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISK---ACCAEKFDWLITGFSLSTLPNTLIVG 117
T DPY MN++ + +D LQK L L G AA S+ A + DW IT FSLSTLPNTL++G
Sbjct: 61 TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120
Query: 118 IPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAAN 158
IPLL MYG +G L+ QIVVLQ +IWYTL+LFLFE RAA
Sbjct: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAAR 161
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 107/140 (76%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GL W+LV FRWH+ +P IV SI +LSD GLGMAMFSLGLF ALQ IIACG
Sbjct: 445 NTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGK 504
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
++++A+RF GPA+M +S AIG+RG LL +AIVQAALPQGIVPFVFAKEYNV I
Sbjct: 505 SAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAI 564
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM++A+P+ L YY
Sbjct: 565 LSTAVIFGMLIALPITLLYY 584
>Os06g0232300 Similar to Auxin transport protein REH1
Length = 592
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 127/176 (72%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ D Y V+ A VPLYVAMILAY S+KWW++FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
T +PY MN++ I +D LQK + L S +W IT FSLSTLPNTL++GIPL
Sbjct: 61 TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALV 176
LKGMYGE +G L+ QIVVLQ +IWYTL+LF+FE R A + T +T G I ++V
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIV 176
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 108/140 (77%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GLIW+LV FRW+ +P I+ SI +LSD GLGMAMFSLGLF ALQ +IIACG
Sbjct: 448 NTYSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMALQPRIIACGN 507
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
K A+A+RF GPA+M +S A+G+RG LL +AIVQAALPQGIVPFVFAKEY+V DI
Sbjct: 508 KVATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPDI 567
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM++A+P+ L YY
Sbjct: 568 LSTAVIFGMLIALPITLVYY 587
>Os06g0660200 Similar to Auxin efflux carrier protein
Length = 630
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 119/168 (70%), Gaps = 8/168 (4%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ +DIY VL A VPLYVAM LAY S++WW +FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAA--------ISKACCAEKFDWLITGFSLSTLPN 112
T DPY MN + + +D LQK + L A A DW IT FSLSTLPN
Sbjct: 61 TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120
Query: 113 TLIVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGM 160
TL++GIPLL+ MYG+ +G L+ QIVVLQS+IWYTL+LFLFE R A +
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKAL 168
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 108/140 (77%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GL+W+LV FRW+I++P I+ SI +LSD GLGMAMFSLGLF ALQ KII+CG
Sbjct: 486 NTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGK 545
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RF GPA++ +S AIG+RGVLL +AIVQAALPQGIVPFVFAKEYN I
Sbjct: 546 TVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQI 605
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM++A+P+ + YY
Sbjct: 606 LSTAVIFGMLIALPITILYY 625
>Os09g0505400 Auxin Efflux Carrier family protein
Length = 398
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 194/389 (49%), Gaps = 102/389 (26%)
Query: 16 PLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVISTTDPYDMNIKLIYSD 75
PLY A+ L Y S++WW+LFT +QC +N+ VA F++P +F + DP+ ++ +++ +D
Sbjct: 3 PLYFALGLGYGSVRWWRLFTADQCDAVNRLVACFAVPFFAFDFAARIDPFALSYRVLAAD 62
Query: 76 ILQKSLALLGFAAI----SKACCAEK---------FDWLITGFSLSTLPNTLIVGIPLLK 122
L K L AA S CC F W ITGFSL+TL NTL+VG+PLL
Sbjct: 63 ALSKLAVALALAACAAAASTRCCGSGGGKRGGGGGFSWCITGFSLATLNNTLVVGVPLLD 122
Query: 123 GMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELR--------------------AANGMAT 162
MYG+ A L+ QI V+Q+++++ LLL FE+R +G A
Sbjct: 123 AMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRATTAAAAPPPPPTGTDDDDVEDGAAA 182
Query: 163 TTSSETTGL-IWALVGFRW-------------------------HIRLPLIVSNSIRMLS 196
++ +W LV W H+ P I+ S+ ++S
Sbjct: 183 AATAAAARRSLWPLVRAVWLKVARNPNVYAGVLGVAWACVTNRWHVETPSIIEGSVLIMS 242
Query: 197 DGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKI 256
G+G++MFS+GLF ALQ KII CGA +L +A+RF GPA + ++A+G+RG LL++
Sbjct: 243 KTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMALRFVAGPAATAVGAFALGLRGDLLRL 302
Query: 257 AIV-------------------------------------------QAALPQGIVPFVFA 273
AI+ QAALPQ I FVFA
Sbjct: 303 AIIQAYTHLHEIHSPSSFFLLSPEICLNSNGCMHDTSPHDETARDEQAALPQSITTFVFA 362
Query: 274 KEYNVQADILSTAIIVGMMVAVPVALAYY 302
KEY + A+ILSTA+I G + ++PV + YY
Sbjct: 363 KEYGLHAEILSTAVIFGTLASLPVLIVYY 391
>Os11g0137000 Similar to PIN1-like auxin transport protein
Length = 554
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 126/183 (68%), Gaps = 7/183 (3%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ D+Y VL A VPLYVAM LAY S++WW++F+P+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
T +P+ MN++ + +D LQK + L A + DWLIT FSLSTLPNTL++GIPL
Sbjct: 61 TNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQA----GKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALV 176
LKGMY A G L+ QIVVLQ +IWYTL+LFLFE R A + +T ++V
Sbjct: 121 LKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAA---SIV 177
Query: 177 GFR 179
FR
Sbjct: 178 SFR 180
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 110/140 (78%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S G+IW+LV +RW I +P I++ SI +LSD GLGMAMFSLGLF ALQ +IIACG
Sbjct: 410 NTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGN 469
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RF +GPA+M +S A+G+RGVLL IAIVQAALPQGIVPFVFAKEYNV +I
Sbjct: 470 SLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNI 529
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM++A+P+ L YY
Sbjct: 530 LSTAVIFGMLIALPITLVYY 549
>Os12g0133800 Similar to Auxin efflux carrier protein
Length = 250
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 110/140 (78%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S G+IW+LV +RW I +P I++ SI +LSD GLGMAMFSLGLF ALQ +IIACG
Sbjct: 106 NTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGN 165
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RF +GPA+M +S A+G+RGVLL IAIVQAALPQGIVPFVFAKEYNV +I
Sbjct: 166 SLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNI 225
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM++A+P+ L YY
Sbjct: 226 LSTAVIFGMLIALPITLVYY 245
>Os01g0802700 Auxin Efflux Carrier family protein
Length = 426
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 110/167 (65%), Gaps = 14/167 (8%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ ++Y V+EA PLY A L Y S++W K F+ EQC+GIN FVA +++P+L F ++S
Sbjct: 1 MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAA--------------ISKACCAEKFDWLITGFS 106
T + Y MN +LI +D LQK++ LLG A +KA + W+IT FS
Sbjct: 61 TNNVYKMNGRLIAADTLQKAVLLLGLMAWALWERSRARGAGAKAKAAVSSPLQWVITCFS 120
Query: 107 LSTLPNTLIVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFE 153
+++LPNT+I+G+PLL GMYG + L+ QIVV+Q IWY +++FL+E
Sbjct: 121 VASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYNVIIFLYE 167
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 89/133 (66%)
Query: 170 GLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLAL 229
GLIW+L+ F+ +P IV +S+ + +G++MFS G F A Q++ + CG K ++
Sbjct: 289 GLIWSLIAFKCGFSMPKIVEDSLFTIRTTAVGLSMFSSGTFIARQSRFVPCGYKIASFSM 348
Query: 230 AIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIV 289
I+F +GP +M +S IGM G LL IA+VQAALP + FV+A+EY V ADI+ST +I+
Sbjct: 349 VIKFLIGPVVMLFASLVIGMHGTLLHIAVVQAALPLAVTSFVYAEEYKVHADIMSTGVIL 408
Query: 290 GMMVAVPVALAYY 302
G+ +++PV + YY
Sbjct: 409 GIFISLPVTIVYY 421
>Os08g0529000 Similar to Auxin efflux carrier component 1 (PIN-FORMED protein)
(AtPIN1)
Length = 370
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 6/163 (3%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M+ W D+Y V+ A PLY A+ L Y S++WW+ FT EQC+ IN V FS+P +F +
Sbjct: 1 MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKF------DWLITGFSLSTLPNTL 114
TDP+ MN ++I +D + K++A+ AA ++ C W ITGFSL+ L NTL
Sbjct: 61 RTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTL 120
Query: 115 IVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
+VG+PLL MYG A L+ QI V+QS++W+ LLL FELR A
Sbjct: 121 VVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKA 163
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 98/133 (73%)
Query: 170 GLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLAL 229
G++WA + +RWH+ LP IV+ S++++S G GM+MFS+GLF Q ++IACGA L +
Sbjct: 232 GVVWACIAYRWHLSLPGIVTGSLQVMSRTGTGMSMFSMGLFMGQQERVIACGAGLTALGM 291
Query: 230 AIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIV 289
A+RF GP + + A+G+RG +L +AI+QAALPQ I FVFAKEY + AD+LSTA+I
Sbjct: 292 ALRFVAGPLATLVGAAALGLRGDVLHLAIIQAALPQSIASFVFAKEYGLHADVLSTAVIF 351
Query: 290 GMMVAVPVALAYY 302
G ++++P+ +AYY
Sbjct: 352 GTLISLPILIAYY 364
>Os11g0122800
Length = 603
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIK-WWKLFTPEQCSGINKFVAKFSIPLLSFQVI 59
M+ W DI +L A PLY A++L Y S K WW++FT E I VA F++P +F+
Sbjct: 12 MIGWVDIGKILSAIAPLYFALVLGYCSSKRWWRIFTAEDSEAI--MVAWFALPFFTFEFT 69
Query: 60 STTDPYDMNIKLIYSDILQKSLALLGFAAI------SKACCAEKFDWLITGFSLSTLPNT 113
DPY++ LI +D + K + ++ + C DW I+GFSL++L N+
Sbjct: 70 LHLDPYNVRYSLIAADSISKLIIVIVIGIGVGLIFRKEGLCTAVIDWCISGFSLASLTNS 129
Query: 114 LIVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
L+VG+P+ + MYG AG+++ Q+ + Q+++W T L+ + E+R A
Sbjct: 130 LVVGVPMARAMYGNWAGQVVVQLSIFQAIVWLTSLMVVLEVRKA 173
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 98/167 (58%), Gaps = 13/167 (7%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIK-WWKLFTPEQCSGINKFVAKFSIPLLSFQVI 59
M+ W DI +L A LY A+ L Y S + WW++FT E IN+ V F+ P +F+
Sbjct: 355 MIGWVDIGKILSAITLLYFALALGYCSSRRWWQIFTAEDSEAINRMVVWFAFPFFTFEFT 414
Query: 60 STTDPYDMNIKLIYSDILQKSLALLGFAAIS---------KACCAEKFDWLITGFSLSTL 110
DPY++ LI +D + K L+ AAIS + CA DW I+GFSL++L
Sbjct: 415 LHLDPYNVRCSLIAADSIAK---LIIVAAISIGVMLKFRKEGLCAAVTDWCISGFSLASL 471
Query: 111 PNTLIVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
N+L+VG+P+ + MYG AG+++ Q+ + Q+++W T L+ + E+R A
Sbjct: 472 TNSLVVGMPMARAMYGNWAGQIVVQLSIFQAIVWLTSLVVVLEVRKA 518
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.141 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,726,390
Number of extensions: 308405
Number of successful extensions: 880
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 869
Number of HSP's successfully gapped: 22
Length of query: 311
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 210
Effective length of database: 11,762,187
Effective search space: 2470059270
Effective search space used: 2470059270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 156 (64.7 bits)