BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0715600 Os01g0715600|Os01g0715600
(311 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15100.1 | chr5:4892159-4893937 REVERSE LENGTH=368 322 1e-88
AT5G16530.1 | chr5:5400735-5402626 FORWARD LENGTH=352 278 3e-75
AT2G01420.2 | chr2:180478-183199 REVERSE LENGTH=617 200 9e-52
AT1G70940.1 | chr1:26743170-26745871 FORWARD LENGTH=641 197 4e-51
AT5G57090.1 | chr5:23100765-23104456 FORWARD LENGTH=648 197 5e-51
AT1G23080.1 | chr1:8180768-8183406 REVERSE LENGTH=620 194 4e-50
AT1G73590.1 | chr1:27659772-27662876 FORWARD LENGTH=623 193 9e-50
AT1G77110.1 | chr1:28970855-28974408 FORWARD LENGTH=571 167 5e-42
>AT5G15100.1 | chr5:4892159-4893937 REVERSE LENGTH=368
Length = 367
Score = 322 bits (826), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 232/363 (63%), Gaps = 60/363 (16%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M+SW DIY V+ ATVPLYV+M L +LS + KLF+PEQC+GINKFVAKFSIPLLSFQ+IS
Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISK-----ACCAEKFDWLITGFSLSTLPNTLI 115
+P+ M+ KLI SDILQK L ++ A + + K W+ITG S+S LPNTLI
Sbjct: 61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120
Query: 116 VGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSS-ETTG---- 170
+G+P+L +YG++A +L QIVVLQSLIWYT+LLFLFEL AA + ++ +S E TG
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQE 180
Query: 171 --------------------------------LIW-----------ALVGFRW---HIR- 183
W L+G W H R
Sbjct: 181 EANIEDEPKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRL 240
Query: 184 ---LPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALM 240
LP ++ SI +LSDGGLGMAMFSLGLF A Q+ IIACG K ++ + ++F LGPALM
Sbjct: 241 GWNLPEMIDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPALM 300
Query: 241 GMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALA 300
S+Y I ++ L K+AI+QAALPQG+VPFVFAKEYN+ +I+ST +I GM++A+P LA
Sbjct: 301 IASAYCIRLKSTLFKVAILQAALPQGVVPFVFAKEYNLHPEIISTGVIFGMLIALPTTLA 360
Query: 301 YYF 303
YYF
Sbjct: 361 YYF 363
>AT5G16530.1 | chr5:5400735-5402626 FORWARD LENGTH=352
Length = 351
Score = 278 bits (711), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 205/347 (59%), Gaps = 42/347 (12%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ D+Y V+EA VPLYVA+IL Y S+KWW +FT +QC IN+ V F++PL + + +
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
DP++MN + I +D+L K + + A +K + W IT FSL TL N+L+VG+PL
Sbjct: 61 HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSS-------------E 167
K MYG+QA L+ Q V Q+++W TLLLF+ E R A + S E
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGFSSNNISDVQVDNINIESGKRE 180
Query: 168 TT-----------------------------GLIWALVGFRWHIRLPLIVSNSIRMLSDG 198
T G+ WA + RWH+ LP I+ SI ++S
Sbjct: 181 TVVVGEKSFLEVMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPGILEGSILIMSKA 240
Query: 199 GLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAI 258
G G AMF++G+F ALQ K+I CG ++ + ++F GPA M + S +G+ G +L++AI
Sbjct: 241 GTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIVLGLHGDVLRVAI 300
Query: 259 VQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALAYYFAM 305
+QAALPQ I F+FAKEY + AD+LSTA+I GM+V++PV +AYY A+
Sbjct: 301 IQAALPQSITSFIFAKEYGLHADVLSTAVIFGMLVSLPVLVAYYAAL 347
>AT2G01420.2 | chr2:180478-183199 REVERSE LENGTH=617
Length = 616
Score = 200 bits (508), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 119/157 (75%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++W D+Y VL A VPLYVAMILAY S++WWK+F+P+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
T DPY MN + + +D LQK + L+ A + +W+IT FSLSTLPNTL++GIPL
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
L MYG AG L+ Q+VVLQ +IWYTLLLFLFE R A
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGA 157
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 106/140 (75%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GLIWALV +RWH+ +P I+ SI +LSD GLGMAMFSLGLF ALQ KIIACG
Sbjct: 472 NTYSSLIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGN 531
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RF GPA+M ++ AIG+ G LL+IAIVQAALPQGIVPFVFAKEYNV I
Sbjct: 532 SVATFAMAVRFITGPAIMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTI 591
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LST +I GM++A+P+ L YY
Sbjct: 592 LSTGVIFGMLIALPITLVYY 611
>AT1G70940.1 | chr1:26743170-26745871 FORWARD LENGTH=641
Length = 640
Score = 197 bits (502), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 119/157 (75%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M+SW D+Y VL A +PLYVAMILAY S++WWK+F+P+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
T +PY MN++ I +D LQK + L + + +W IT FSLSTLPNTL++GIPL
Sbjct: 61 TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
L MYGE +G L+ QIVVLQ +IWYTLLLFLFE R A
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGA 157
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 108/140 (77%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GLIWALV FRWH+ +P I+ SI +LSD GLGMAMFSLGLF ALQ K+IACG
Sbjct: 496 NTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGN 555
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RF GPA+M +++ AIG+RG LL++AIVQAALPQGIVPFVFAKEYNV I
Sbjct: 556 SVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAI 615
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LST +I GM++A+P+ L YY
Sbjct: 616 LSTGVIFGMLIALPITLVYY 635
>AT5G57090.1 | chr5:23100765-23104456 FORWARD LENGTH=648
Length = 647
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 128/175 (73%), Gaps = 6/175 (3%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ KD+Y VL A VPLYVAMILAY S++WW +FTP+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSL---ALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVG 117
+ DPY MN + +D LQK + AL + A S+ E W+IT FSLSTLPNTL++G
Sbjct: 61 SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLE---WMITLFSLSTLPNTLVMG 117
Query: 118 IPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLI 172
IPLL+ MYG+ +G L+ QIVVLQS+IWYTL+LFLFE R A + + ET G I
Sbjct: 118 IPLLRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSI 172
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 109/140 (77%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GL W+LV F+W+I++P I+S SI +LSD GLGMAMFSLGLF ALQ KIIACG
Sbjct: 503 NTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGK 562
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RF GPA++ +S AIG+RG LL IAIVQAALPQGIVPFVFAKEYNV DI
Sbjct: 563 SVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDI 622
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LSTA+I GM+VA+PV + YY
Sbjct: 623 LSTAVIFGMLVALPVTVLYY 642
>AT1G23080.1 | chr1:8180768-8183406 REVERSE LENGTH=620
Length = 619
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 119/157 (75%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++W D+Y VL A +PLYVAMILAY S++WWK+F+P+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
+ +PY MN++ I +D LQK + L + + +W IT FSLSTLPNTL++GIPL
Sbjct: 61 SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
L MYGE +G L+ QIVVLQ +IWYTLLLFLFE R A
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGA 157
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 108/140 (77%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GLIWALV FRW + +P I+ SI +LSD GLGMAMFSLGLF ALQ K+IACG
Sbjct: 475 NTYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGN 534
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
A+A+RFF GPA+M +++ AIG+RG LL++AIVQAALPQGIVPFVFAKEYNV I
Sbjct: 535 STATFAMAVRFFTGPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAI 594
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LST +I GM++A+P+ L YY
Sbjct: 595 LSTGVIFGMLIALPITLVYY 614
>AT1G73590.1 | chr1:27659772-27662876 FORWARD LENGTH=623
Length = 622
Score = 193 bits (491), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 122/172 (70%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ D Y V+ A VPLYVAMILAY S+KWWK+FTP+QCSGIN+FVA F++PLLSF I+
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
+PY MN++ + +D LQK + L K DW IT FSLSTLPNTL++GIPL
Sbjct: 61 ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLI 172
LKGMYG +G L+ QIVVLQ +IWYTL+LFLFE R A + + +T G I
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSI 172
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 110/133 (82%)
Query: 170 GLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLAL 229
G+ W+L+ F+W+I +P +++ SI +LSD GLGMAMFSLGLF AL +IIACG +R A
Sbjct: 485 GITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFAA 544
Query: 230 AIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIV 289
A+RF +GPA+M ++SYA+G+RGVLL +AI+QAALPQGIVPFVFAKEYNV DILSTA+I
Sbjct: 545 AMRFVVGPAVMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTAVIF 604
Query: 290 GMMVAVPVALAYY 302
GM++A+P+ L YY
Sbjct: 605 GMLIALPITLLYY 617
>AT1G77110.1 | chr1:28970855-28974408 FORWARD LENGTH=571
Length = 570
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 110/157 (70%)
Query: 1 MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60
M++ + Y V+ A PLY AM +AY S+KW K+FTP QCSGIN+FV+ F++P+LSF IS
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 61 TTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPL 120
+PY M+ I +D L K + + + A DWLIT FS++TLPNTL++GIPL
Sbjct: 61 QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120
Query: 121 LKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAA 157
L+ MYG+ L+ Q+VVLQ +IWYTLLLFLFELRAA
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAA 157
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 104/140 (74%)
Query: 163 TTSSETTGLIWALVGFRWHIRLPLIVSNSIRMLSDGGLGMAMFSLGLFTALQTKIIACGA 222
T S GL+W+L+ F+W+I +P IV SI+++SD GLGMAMFSLGLF ALQ K+I CGA
Sbjct: 426 NTYSSLLGLVWSLISFKWNIPMPNIVDFSIKIISDAGLGMAMFSLGLFMALQPKMIPCGA 485
Query: 223 KRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADI 282
K+ + + IRF GP M +S +G+RG L AIVQAALPQGIVPFVFA+EYN+ D+
Sbjct: 486 KKATMGMLIRFISGPLFMAGASLLVGLRGSRLHAAIVQAALPQGIVPFVFAREYNLHPDL 545
Query: 283 LSTAIIVGMMVAVPVALAYY 302
LST +I GM+V++PV + YY
Sbjct: 546 LSTLVIFGMIVSLPVTILYY 565
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.329 0.141 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,732,222
Number of extensions: 209863
Number of successful extensions: 677
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 670
Number of HSP's successfully gapped: 15
Length of query: 311
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 213
Effective length of database: 8,419,801
Effective search space: 1793417613
Effective search space used: 1793417613
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 111 (47.4 bits)